FC876888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876888 vs. ExPASy Swiss-Prot
Match: R126B_XENLA (RING finger protein 126-B OS=Xenopus laevis GN=rnf126-B PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.270e-15 Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 347 GTSSLETLLRNFVGKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 607 G ++ T L N G PPA ++A+P+I++ E E G EC VC E+Y VGE R++PC H FH +CI WL +CPVCR Sbjct: 184 GLDTIITQLLNQFENTGPPPADTDKIQALPTIQITE-EHVGFGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCR 269
BLAST of FC876888 vs. ExPASy Swiss-Prot
Match: RN126_XENTR (RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.080e-14 Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 347 GTSSLETLLRNFVGKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 607 G ++ T L N G PPA ++A+P+I++ E E G EC VC E+Y VGE R++PC H FH +CI WL +CPVCR Sbjct: 183 GLDTIITQLLNQFENTGPPPADTEKIQALPTIQITE-EHVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCR 268
BLAST of FC876888 vs. ExPASy Swiss-Prot
Match: RN126_HUMAN (RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.080e-14 Identity = 38/87 (43.68%), Postives = 50/87 (57.47%), Query Frame = 2 Query: 347 GTSSLETLLRNFVGKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 607 G ++ T L N G PPA K ++A+P++ V E E G EC VC ++Y +GE R++PC H FH CI WL SCPVCR Sbjct: 185 GLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTE-EHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCR 270
BLAST of FC876888 vs. ExPASy Swiss-Prot
Match: RN115_HUMAN (RING finger protein 115 OS=Homo sapiens GN=RNF115 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.080e-14 Identity = 37/106 (34.91%), Postives = 62/106 (58.49%), Query Frame = 2 Query: 347 GTSSLETLLRNFVGK---DGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEEESGNKRDE 655 G + L+ ++ +G+ G PPA K + ++P++ V + E+ +G EC VC E+Y V E R++PC H FH++CI WL + +CPVCR + E+ ++ E Sbjct: 181 GQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQ-EQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQSQSTE 285
BLAST of FC876888 vs. ExPASy Swiss-Prot
Match: RN126_BOVIN (RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.411e-14 Identity = 38/87 (43.68%), Postives = 50/87 (57.47%), Query Frame = 2 Query: 347 GTSSLETLLRNFVGKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 607 G ++ T L N G PPA K ++A+P++ V E E G EC VC ++Y +GE R++PC H FH CI WL SCPVCR Sbjct: 188 GLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTE-EHVGSGLECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCR 273
BLAST of FC876888 vs. ExPASy Swiss-Prot
Match: RN115_MOUSE (RING finger protein 115 OS=Mus musculus GN=Rnf115 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.406e-14 Identity = 37/106 (34.91%), Postives = 60/106 (56.60%), Query Frame = 2 Query: 347 GTSSLETLLRNFVGK---DGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEEESGNKRDE 655 G + L+ ++ +G+ G PPA K + ++P++ V + E+ G EC VC E+Y V E R++PC H FH++CI WL + +CPVCR + E+ + E Sbjct: 182 GQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQ-EQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQTQSSE 286
BLAST of FC876888 vs. ExPASy Swiss-Prot
Match: PJA1_MOUSE (E3 ubiquitin-protein ligase Praja1 OS=Mus musculus GN=Pja1 PE=1 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 3.143e-14 Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 401 PPASKASVEAMPSIKVGESEEEALGGE--CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMP 619 PPASK S++A+P I V E + A+G E C +C EY GEVA E+PC H FH C+ WL G+CPVCR P Sbjct: 502 PPASKESIDALPEILVTE-DHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 575
BLAST of FC876888 vs. ExPASy Swiss-Prot
Match: PJA1_HUMAN (E3 ubiquitin-protein ligase Praja1 OS=Homo sapiens GN=PJA1 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.143e-14 Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 401 PPASKASVEAMPSIKVGESEEEALGGE--CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMP 619 PPASK S++A+P I V E + A+G E C +C EY GEVA E+PC H FH C+ WL G+CPVCR P Sbjct: 567 PPASKESIDALPEILVTE-DHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 640
BLAST of FC876888 vs. ExPASy Swiss-Prot
Match: RN181_DROME (E3 ubiquitin-protein ligase CG7694 OS=Drosophila melanogaster GN=CG7694 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.017e-12 Identity = 40/94 (42.55%), Postives = 55/94 (58.51%), Query Frame = 2 Query: 401 PPASKASVEAMPSIKVGESEEEALGG--ECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKM----PVEEEESGNKRDERRR 664 P ASK ++ +P ++ +S+E GG EC VC E E G+ R +PCKH+FH CI WL SCP+CRY++ PV EE ++DE R Sbjct: 44 PEASKRAILELPVHEIVKSDE---GGDLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYELETDDPVYEELRRFRQDEANR 134
BLAST of FC876888 vs. ExPASy Swiss-Prot
Match: RNF44_RAT (RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.553e-12 Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 2 Query: 410 SKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 607 +KA +E +PS + ++ CVVC ++EV ++ R +PC H+FHA C++KWL +CP+CR Sbjct: 274 TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 339 The following BLAST results are available for this feature:
BLAST of FC876888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876888 ID=FC876888; Name=FC876888; organism=Citrus clementina; type=EST; length=749bpback to top |