FC876905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_RHOP2 (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain HaA2) GN=atpD PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.669e-35 Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGV K G + SKCALVYGQMNEPPGARARV L+GLTVAEHFRD +GQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 200 ESGVNKKGGGEG-SKCALVYGQMNEPPGARARVALSGLTVAEHFRD-QGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 288
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_NITWN (ATP synthase subunit beta OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=atpD PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.669e-35 Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGV K G + SKCALVYGQMNEPPGARARV L+GLTVAEHFRD +GQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 200 ESGVNKKGGGEG-SKCALVYGQMNEPPGARARVALSGLTVAEHFRD-QGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 288
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_NITHX (ATP synthase subunit beta OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=atpD PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.669e-35 Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGV K G + SKCALVYGQMNEPPGARARV L+GLTVAEHFRD +GQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 200 ESGVNKKGGGEG-SKCALVYGQMNEPPGARARVALSGLTVAEHFRD-QGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 288
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_XANP2 (ATP synthase subunit beta OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=atpD PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.404e-35 Identity = 73/84 (86.90%), Postives = 76/84 (90.48%), Query Frame = 3 Query: 24 GDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 G A SKCALVYGQMNEPPGARARV LTGLTVAEHFRD +GQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 208 GGSAAGSKCALVYGQMNEPPGARARVALTGLTVAEHFRD-QGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 290
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_PELUB (ATP synthase subunit beta OS=Pelagibacter ubique GN=atpD PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.404e-35 Identity = 75/91 (82.42%), Postives = 80/91 (87.91%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 +SGVIK + SK ALVYGQMNEPPGARARV LTGLTVAE+FRD EGQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 195 DSGVIK--PEGPGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 283
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_DICDI (ATP synthase subunit beta, mitochondrial OS=Dictyostelium discoideum GN=atp5b PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.404e-35 Identity = 76/91 (83.52%), Postives = 82/91 (90.11%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 E+GVIK + SK ALV+GQMNEPPGARARV LTGLTVAE+FRDAEGQDVLLFIDNIFRFTQA SE+SALLGRIPSAVGYQPTLATD+G Sbjct: 302 EAGVIK--KEGPGSKVALVFGQMNEPPGARARVTLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMG 390
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB1_RHOS4 (ATP synthase subunit beta 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=atpD1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.404e-35 Identity = 74/91 (81.32%), Postives = 80/91 (87.91%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVIK+ D ++SK ALVYGQMNEPPGARARV LTGLT+AE FRD G DVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 198 ESGVIKI-DNLSESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 287
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB1_RHOS1 (ATP synthase subunit beta 1 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=atpD1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.404e-35 Identity = 74/91 (81.32%), Postives = 80/91 (87.91%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVIK+ D ++SK ALVYGQMNEPPGARARV LTGLT+AE FRD G DVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 198 ESGVIKI-DNLSESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 287
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_RHOS5 (ATP synthase subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=atpD PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.649e-34 Identity = 73/91 (80.22%), Postives = 80/91 (87.91%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 +SGVIK+ D ++SK ALVYGQMNEPPGARARV LTGLT+AE FRD G DVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 198 DSGVIKI-DNLSESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 287
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_RHISN (ATP synthase subunit beta OS=Rhizobium sp. (strain NGR234) GN=atpD PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.649e-34 Identity = 76/91 (83.52%), Postives = 80/91 (87.91%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGV K G + SK ALVYGQMNEPPGARARV LTGLT+AEHFRD EGQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 229 ESGVNKHGGGEG-SKAALVYGQMNEPPGARARVALTGLTIAEHFRD-EGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 317 The following BLAST results are available for this feature:
BLAST of FC876905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876905 ID=FC876905; Name=FC876905; organism=Citrus clementina; type=EST; length=280bpback to top |