FC876905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_NEUCR (ATP synthase subunit beta, mitochondrial OS=Neurospora crassa GN=atp-2 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.649e-34 Identity = 74/91 (81.32%), Postives = 80/91 (87.91%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 E+ VI+L DSK ALV+GQMNEPPGARARV LTGLT+AE+FRD EGQDVLLFIDNIFRFTQA SEVSALLGRIPSAVGYQPTLA D+G Sbjct: 241 ETSVIQL---DGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMG 328
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_RHOCA (ATP synthase subunit beta OS=Rhodobacter capsulatus GN=atpD PE=1 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 2.154e-34 Identity = 74/91 (81.32%), Postives = 79/91 (86.81%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI L +K +SK ALVYGQMNEPPGARARV LTGLT+AE FRD G DVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 196 ESGVINL-EKLEESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 285
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_RHILO (ATP synthase subunit beta OS=Rhizobium loti GN=atpD PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.154e-34 Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGV K G + SK ALVYGQMNEPPGARARVGLTGLTVAE+FRD +GQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 201 ESGVNKKGGGEG-SKAALVYGQMNEPPGARARVGLTGLTVAEYFRD-QGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 289
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_MESSB (ATP synthase subunit beta OS=Mesorhizobium sp. (strain BNC1) GN=atpD PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.154e-34 Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGV K G + SK ALVYGQMNEPPGARARVGLTGLTVAE+FRD +GQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 243 ESGVNKKGGGEG-SKAALVYGQMNEPPGARARVGLTGLTVAEYFRD-QGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 331
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_AZOC5 (ATP synthase subunit beta OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=atpD PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.154e-34 Identity = 72/80 (90.00%), Postives = 75/80 (93.75%), Query Frame = 3 Query: 36 ADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 A SKCALVYGQMNEPPGARARV LTGLTVAEHFRD +GQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 212 AGSKCALVYGQMNEPPGARARVALTGLTVAEHFRD-QGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 290
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_RHIEC (ATP synthase subunit beta OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=atpD PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.813e-34 Identity = 76/91 (83.52%), Postives = 80/91 (87.91%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGV K G + SK ALVYGQMNEPPGARARV LTGLTVAEHFRD +GQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 201 ESGVNKHGGGEG-SKAALVYGQMNEPPGARARVALTGLTVAEHFRD-QGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 289
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_RHIE6 (ATP synthase subunit beta OS=Rhizobium etli (strain CIAT 652) GN=atpD PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.813e-34 Identity = 76/91 (83.52%), Postives = 80/91 (87.91%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGV K G + SK ALVYGQMNEPPGARARV LTGLTVAEHFRD +GQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 201 ESGVNKHGGGEG-SKAALVYGQMNEPPGARARVALTGLTVAEHFRD-QGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 289
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_GLUDA (ATP synthase subunit beta OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=atpD PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.674e-34 Identity = 70/92 (76.09%), Postives = 83/92 (90.22%), Query Frame = 3 Query: 3 ESGVIKLGDKQAD-SKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ++GVIKLG+ + SK ALVYGQMNEPPGARAR+ L+GL++AE+FRD EGQDVL F+DNIFRFTQA +EVSALLGRIPSAVGYQPTLAT++G Sbjct: 215 DAGVIKLGEDTTEGSKVALVYGQMNEPPGARARIALSGLSLAEYFRDEEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMG 306
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_ALKOO (ATP synthase subunit beta OS=Alkaliphilus oremlandii (strain OhILAs) GN=atpD PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.799e-34 Identity = 74/91 (81.32%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI K ALVYGQMNEPPGAR RVGLTGLT+AEHFRD EGQDVLLFIDNIFRFTQA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 199 ESGVI--------DKTALVYGQMNEPPGARMRVGLTGLTMAEHFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 281
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_RHOBL (ATP synthase subunit beta OS=Rhodopseudomonas blastica GN=atpD PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 6.268e-34 Identity = 73/91 (80.22%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI + D + SK ALVYGQMNEPPGARARV LTGLT+AE FRD G DVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 201 ESGVINIDDLEK-SKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 290 The following BLAST results are available for this feature:
BLAST of FC876905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876905 ID=FC876905; Name=FC876905; organism=Citrus clementina; type=EST; length=280bpback to top |