FC876905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_IPOAQ (ATP synthase subunit beta, chloroplastic OS=Ipomoea aquatica GN=atpB PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31 Identity = 69/91 (75.82%), Postives = 77/91 (84.62%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI + +SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 216 ESGVIN-EENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 305
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_GEOSL (ATP synthase subunit beta OS=Geobacter sulfurreducens GN=atpD PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31 Identity = 68/91 (74.73%), Postives = 77/91 (84.62%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGV+ K ALVYGQMNEPPGARARV L+ L++AE+FRD EGQ+VLLF+DNIFRFTQA SEVSALLGRIPSAVGYQPTLAT++G Sbjct: 203 ESGVL--------DKAALVYGQMNEPPGARARVALSALSIAEYFRDEEGQNVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMG 285
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_DRIGR (ATP synthase subunit beta, chloroplastic OS=Drimys granadensis GN=atpB PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31 Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI + A+SK ALV+GQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 218 ESGVIN-EENIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 307
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_DESVM (ATP synthase subunit beta OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=atpD PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31 Identity = 65/78 (83.33%), Postives = 69/78 (88.46%), Query Frame = 3 Query: 45 KCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGG 278 K AL+YGQMNEPPGARARV LT L AE+FRD E QDVLLF+DNIFRFTQA SEVSALLGR+PSAVGYQPTL TDLGG Sbjct: 208 KAALIYGQMNEPPGARARVALTALACAEYFRDIENQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGG 285
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_DESOH (ATP synthase subunit beta OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=atpD PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31 Identity = 65/78 (83.33%), Postives = 70/78 (89.74%), Query Frame = 3 Query: 45 KCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGG 278 K AL+YGQM EPPGARARV L+ LT AE+FRD EGQDVL+FIDNIFRFTQA +EVSALLGRIPSAVGYQPTLA DLGG Sbjct: 209 KAALIYGQMTEPPGARARVALSALTCAEYFRDVEGQDVLIFIDNIFRFTQAGAEVSALLGRIPSAVGYQPTLAVDLGG 286
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_CYCTA (ATP synthase subunit beta, chloroplastic OS=Cycas taitungensis GN=atpB PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31 Identity = 70/91 (76.92%), Postives = 76/91 (83.52%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI D SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 216 ESGVINEQDISG-SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 305
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_CYAP7 (ATP synthase subunit beta OS=Cyanothece sp. (strain PCC 7424) GN=atpD PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31 Identity = 70/91 (76.92%), Postives = 75/91 (82.42%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ES VI D DSK ALVYGQMNEPPGAR RVGL+ LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL TD+G Sbjct: 207 ESKVIN-PDNPEDSKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVG 296
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_CUSJA (ATP synthase subunit beta, plastid OS=Cuscuta japonica GN=atpB PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31 Identity = 69/91 (75.82%), Postives = 77/91 (84.62%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI + +SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 216 ESGVIN-ENNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 305
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_CLOTH (ATP synthase subunit beta OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=atpD PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31 Identity = 70/91 (76.92%), Postives = 77/91 (84.62%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI+ K ALV+GQMNEPPG+R RVGLTGLT+AE+FRD GQDVLLFIDNIFRF QA SEVSALLGRIPSAVGYQPTLAT++G Sbjct: 199 ESGVIE--------KTALVFGQMNEPPGSRMRVGLTGLTMAEYFRDELGQDVLLFIDNIFRFIQAGSEVSALLGRIPSAVGYQPTLATEMG 281
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_CHLPD (ATP synthase subunit beta OS=Chlorobium phaeobacteroides (strain DSM 266) GN=atpD PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31 Identity = 69/91 (75.82%), Postives = 77/91 (84.62%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI K ALV+GQMNEPPGARARV LTGL++AE+FRD E +DVLLFIDNIFRFTQA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 197 ESGVI--------DKTALVFGQMNEPPGARARVALTGLSIAEYFRDEENRDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 279 The following BLAST results are available for this feature:
BLAST of FC876905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876905 ID=FC876905; Name=FC876905; organism=Citrus clementina; type=EST; length=280bpback to top |