FC876905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_CHAGL (ATP synthase subunit beta, chloroplastic OS=Chaetosphaeridium globosum GN=atpB PE=3 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31 Identity = 69/92 (75.00%), Postives = 77/92 (83.70%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGG 278 ES VI + +SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++GG Sbjct: 216 ESKVIN-EENLGESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGG 306
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_BACME (ATP synthase subunit beta OS=Bacillus megaterium GN=atpD PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31 Identity = 68/91 (74.73%), Postives = 77/91 (84.62%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 +SGVIK K A+V+GQMNEPPGAR RV LTGLT+AE+FRD +GQDVL FIDNIFRFTQA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 204 DSGVIK--------KTAMVFGQMNEPPGARQRVALTGLTMAEYFRDEQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 286
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_BACHD (ATP synthase subunit beta OS=Bacillus halodurans GN=atpD PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31 Identity = 68/91 (74.73%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 +SGVIK K A+V+GQMNEPPGAR RV L+GLT+AE+FRD +GQDVLLFIDNIFRFTQA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 204 DSGVIK--------KTAMVFGQMNEPPGARMRVALSGLTMAEYFRDKQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 286
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_WHEAT (ATP synthase subunit beta, chloroplastic OS=Triticum aestivum GN=atpB PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.911e-31 Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI + + +SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 218 ESGVINEKNIE-ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 307
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_VITVI (ATP synthase subunit beta, chloroplastic OS=Vitis vinifera GN=atpB PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.911e-31 Identity = 70/92 (76.09%), Postives = 79/92 (85.87%), Query Frame = 3 Query: 3 ESGVIKLGDKQ-ADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI +K ++SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 218 ESGVIN--EKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 307
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_SORBI (ATP synthase subunit beta, chloroplastic OS=Sorghum bicolor GN=atpB PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.911e-31 Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI + + +SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 218 ESGVINEKNIE-ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 307
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_SACOF (ATP synthase subunit beta, chloroplastic OS=Saccharum officinarum GN=atpB PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.911e-31 Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI + + +SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 218 ESGVINEKNIE-ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 307
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_SACHY (ATP synthase subunit beta, chloroplastic OS=Saccharum hybrid GN=atpB PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.911e-31 Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI + + +SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 218 ESGVINEKNIE-ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 307
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_PROMS (ATP synthase subunit beta OS=Prochlorococcus marinus (strain AS9601) GN=atpD PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.911e-31 Identity = 68/91 (74.73%), Postives = 74/91 (81.32%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI D SK AL +GQMNEPPGAR RVGL+ LT+AEHFRD QDVLLF+DNIFRF QA SEVSALLGR+PSAVGYQPTL TD+G Sbjct: 210 ESGVIN-ADDLTQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVG 299
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_PROMA (ATP synthase subunit beta OS=Prochlorococcus marinus GN=atpD PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.911e-31 Identity = 68/91 (74.73%), Postives = 74/91 (81.32%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI D SK AL +GQMNEPPGAR RVGL+ LT+AEHFRD QDVLLF+DNIFRF QA SEVSALLGR+PSAVGYQPTL TD+G Sbjct: 210 ESGVIN-ADDLTQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVG 299 The following BLAST results are available for this feature:
BLAST of FC876905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876905 ID=FC876905; Name=FC876905; organism=Citrus clementina; type=EST; length=280bpback to top |