FC876905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_CUSEX (ATP synthase subunit beta, plastid OS=Cuscuta exaltata GN=atpB PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.802e-31 Identity = 70/92 (76.09%), Postives = 78/92 (84.78%), Query Frame = 3 Query: 3 ESGVIKLGDKQ-ADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI +K +SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 216 ESGVIN--EKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 305
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_CINCA (ATP synthase subunit beta, chloroplastic OS=Cinnamomum camphora GN=atpB PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.802e-31 Identity = 69/91 (75.82%), Postives = 77/91 (84.62%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI A+SK ALV+GQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 218 ESGVIN-EQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 307
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_CARHZ (ATP synthase subunit beta OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=atpD PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.802e-31 Identity = 64/77 (83.12%), Postives = 71/77 (92.21%), Query Frame = 3 Query: 45 KCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 K +V+GQMNEPPG R RVGLTGLT+AE+FRD EGQDVLLFIDNIFRFTQA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 210 KTIMVFGQMNEPPGVRLRVGLTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 286
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_CALFL (ATP synthase subunit beta, chloroplastic OS=Calycanthus floridus GN=atpB PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.802e-31 Identity = 69/91 (75.82%), Postives = 77/91 (84.62%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI A+SK ALV+GQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 218 ESGVIN-EQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 307
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_CALFG (ATP synthase subunit beta, chloroplastic OS=Calycanthus floridus var. glaucus GN=atpB PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.802e-31 Identity = 69/91 (75.82%), Postives = 77/91 (84.62%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI A+SK ALV+GQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 218 ESGVIN-EQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 307
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB3_PELCD (ATP synthase subunit beta 3 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=atpD3 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.802e-31 Identity = 65/77 (84.42%), Postives = 71/77 (92.21%), Query Frame = 3 Query: 45 KCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 K ALVYGQMNEPPGARARV L+ LTVAE+FRD E QDVLLF+DNIFRFTQA SEVSALLGRIPSAVGYQPTL+T++G Sbjct: 207 KTALVYGQMNEPPGARARVALSALTVAEYFRDQENQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTEMG 283
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB1_PELLD (ATP synthase subunit beta 1 OS=Pelodictyon luteolum (strain DSM 273) GN=atpD1 PE=3 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 3.802e-31 Identity = 69/91 (75.82%), Postives = 77/91 (84.62%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI K ALV+GQMNEPPGARARV LTGL++AE+FRD E +DVLLFIDNIFRFTQA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 197 ESGVI--------DKTALVFGQMNEPPGARARVALTGLSIAEYFRDEEHRDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 279
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB1_PELCD (ATP synthase subunit beta 1 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=atpD1 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.802e-31 Identity = 65/77 (84.42%), Postives = 71/77 (92.21%), Query Frame = 3 Query: 45 KCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 K ALVYGQMNEPPGARARV L+ LTVAE+FRD E QDVLLF+DNIFRFTQA SEVSALLGRIPSAVGYQPTL+T++G Sbjct: 207 KTALVYGQMNEPPGARARVALSALTVAEYFRDQENQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTEMG 283
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_WOLTR (ATP synthase subunit beta OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=atpD PE=3 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 66/90 (73.33%), Postives = 76/90 (84.44%), Query Frame = 3 Query: 6 SGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 S VI + + + S+ LVYGQMNEPPGARARV LT LT+AE+FRD E QDVL F+DNIFRFTQA SE+SALLGR+PSAVGYQPTLATD+G Sbjct: 199 SNVINVNEHEK-SQAVLVYGQMNEPPGARARVALTALTMAEYFRDHENQDVLFFVDNIFRFTQAGSEISALLGRMPSAVGYQPTLATDMG 287
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_PROWI (ATP synthase subunit beta, plastid OS=Prototheca wickerhamii GN=atpB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 68/91 (74.73%), Postives = 77/91 (84.62%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESG+I ++SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTLA+++G Sbjct: 208 ESGIINEA-LISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVSSQDVLLFIDNIFRFLQAGSEVSALLGRLPSAVGYQPTLASEMG 297 The following BLAST results are available for this feature:
BLAST of FC876905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876905 ID=FC876905; Name=FC876905; organism=Citrus clementina; type=EST; length=280bpback to top |