FC876905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_PEPNI (ATP synthase subunit beta (Fragment) OS=Peptococcus niger GN=atpD PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 68/91 (74.73%), Postives = 76/91 (83.52%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI K +LV+GQMNEPPGAR R+ LTGLTVAE+FRD + QDVLLFIDNIFRFTQA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 206 ESGVI--------DKTSLVFGQMNEPPGARMRIALTGLTVAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 288
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_OSTTA (ATP synthase subunit beta, chloroplastic OS=Ostreococcus tauri GN=atpB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 3 Query: 36 ADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 A+SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLF+DNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 221 ANSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 300
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_MYCS5 (ATP synthase subunit beta OS=Mycoplasma synoviae (strain 53) GN=atpD PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 65/77 (84.42%), Postives = 71/77 (92.21%), Query Frame = 3 Query: 45 KCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 K ALV+GQMNEPPGAR RV LTGLT+AE+FRD + QDVLLFIDNIFRFTQA SEVSALLGRIPSAVGYQPTLAT++G Sbjct: 206 KTALVFGQMNEPPGARMRVALTGLTMAEYFRDKQNQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMG 282
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_LACSA (ATP synthase subunit beta, chloroplastic OS=Lactuca sativa GN=atpB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 70/92 (76.09%), Postives = 78/92 (84.78%), Query Frame = 3 Query: 3 ESGVIKLGDKQA-DSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI +K +SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 218 ESGVIN--EKNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 307
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_GNEPA (ATP synthase subunit beta, chloroplastic OS=Gnetum parvifolium GN=atpB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 70/92 (76.09%), Postives = 78/92 (84.78%), Query Frame = 3 Query: 3 ESGVIKLGDKQ-ADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI +K A+SK ALVYGQMNEPPGAR RVGLT L +AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 214 ESGVIN--EKNIAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 303
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_EQUAR (ATP synthase subunit beta, chloroplastic (Fragment) OS=Equisetum arvense GN=atpB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 65/80 (81.25%), Postives = 72/80 (90.00%), Query Frame = 3 Query: 36 ADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ++SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 228 SESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG 307
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_EHRRW (ATP synthase subunit beta OS=Ehrlichia ruminantium (strain Welgevonden) GN=atpD PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 66/91 (72.53%), Postives = 76/91 (83.52%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI L +K S+ LVYGQMNEPPGAR RV L+ LT+AE+FRD E QDVL F+DNIFRFTQ+ SE+SALLGRIPSAVGYQPTLA ++G Sbjct: 227 ESGVINLEEKDK-SQAVLVYGQMNEPPGARLRVALSALTMAEYFRDVENQDVLFFVDNIFRFTQSGSEISALLGRIPSAVGYQPTLAAEMG 316
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_EHRRG (ATP synthase subunit beta OS=Ehrlichia ruminantium (strain Gardel) GN=atpD PE=3 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 66/91 (72.53%), Postives = 76/91 (83.52%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI L +K S+ LVYGQMNEPPGAR RV L+ LT+AE+FRD E QDVL F+DNIFRFTQ+ SE+SALLGRIPSAVGYQPTLA ++G Sbjct: 227 ESGVINLEEKDK-SQAVLVYGQMNEPPGARLRVALSALTMAEYFRDVENQDVLFFVDNIFRFTQSGSEISALLGRIPSAVGYQPTLAAEMG 316
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_CYAP4 (ATP synthase subunit beta OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=atpD PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 69/91 (75.82%), Postives = 75/91 (82.42%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ES VI D + SK ALVYGQMNEPPGAR RVGL+ LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL TD+G Sbjct: 208 ESNVINKDDP-SQSKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVG 297
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_BETVU (ATP synthase subunit beta, chloroplastic OS=Beta vulgaris GN=atpB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 69/91 (75.82%), Postives = 76/91 (83.52%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI A+SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNI RF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 218 ESGVIN-EQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNILRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 307 The following BLAST results are available for this feature:
BLAST of FC876905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876905 ID=FC876905; Name=FC876905; organism=Citrus clementina; type=EST; length=280bpback to top |