FC876905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_ANOFW (ATP synthase subunit beta OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=atpD PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 64/86 (74.42%), Postives = 75/86 (87.21%), Query Frame = 3 Query: 18 KLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ++ D +K A+V+GQMNEPPGAR RV LTGLT+AE+FRD +GQDVL FIDNIFRFTQA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 201 EMKDSGVINKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 286
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB2_LISW6 (ATP synthase subunit beta 2 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=atpD2 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 65/86 (75.58%), Postives = 74/86 (86.05%), Query Frame = 3 Query: 18 KLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ++ D K A+V+GQMNEPPGAR RV LTGLT+AE+FRD E QDVLLFIDNIFRFTQA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 201 EMKDSGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 286
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB2_LISMO (ATP synthase subunit beta 2 OS=Listeria monocytogenes GN=atpD2 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 65/86 (75.58%), Postives = 74/86 (86.05%), Query Frame = 3 Query: 18 KLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ++ D K A+V+GQMNEPPGAR RV LTGLT+AE+FRD E QDVLLFIDNIFRFTQA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 201 EMKDSGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 286
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB2_LISMF (ATP synthase subunit beta 2 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=atpD2 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 65/86 (75.58%), Postives = 74/86 (86.05%), Query Frame = 3 Query: 18 KLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ++ D K A+V+GQMNEPPGAR RV LTGLT+AE+FRD E QDVLLFIDNIFRFTQA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 201 EMKDSGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 286
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB2_LISIN (ATP synthase subunit beta 2 OS=Listeria innocua GN=atpD2 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31 Identity = 65/86 (75.58%), Postives = 74/86 (86.05%), Query Frame = 3 Query: 18 KLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ++ D K A+V+GQMNEPPGAR RV LTGLT+AE+FRD E QDVLLFIDNIFRFTQA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 201 EMKDSGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 286
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_PYLLI (ATP synthase subunit beta, chloroplastic OS=Pylaiella littoralis GN=atpB PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.486e-31 Identity = 69/91 (75.82%), Postives = 75/91 (82.42%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI +SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL T++G Sbjct: 207 ESGVIN-ETNLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 296
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_PSINU (ATP synthase subunit beta, chloroplastic OS=Psilotum nudum GN=atpB PE=3 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 6.486e-31 Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 3 Query: 36 ADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ++SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL+T++G Sbjct: 226 SESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 305
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_PROMT (ATP synthase subunit beta OS=Prochlorococcus marinus (strain NATL2A) GN=atpD PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.486e-31 Identity = 69/91 (75.82%), Postives = 74/91 (81.32%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI D SK AL +GQMNEPPGAR RVGL+ LT+AEHFRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL TD+G Sbjct: 210 ESGVINSEDL-TKSKLALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVG 299
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_PROM1 (ATP synthase subunit beta OS=Prochlorococcus marinus (strain NATL1A) GN=atpD PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.486e-31 Identity = 69/91 (75.82%), Postives = 74/91 (81.32%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI D SK AL +GQMNEPPGAR RVGL+ LT+AEHFRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL TD+G Sbjct: 210 ESGVINSEDL-TKSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVG 299
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_PRODI (ATP synthase subunit beta OS=Prochloron didemni GN=atpD PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.486e-31 Identity = 69/91 (75.82%), Postives = 75/91 (82.42%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ES VI D +SK ALVYGQMNEPPGAR RVGL+ LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTL TD+G Sbjct: 208 ESKVIN-ADNLNESKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVG 297 The following BLAST results are available for this feature:
BLAST of FC876905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876905 ID=FC876905; Name=FC876905; organism=Citrus clementina; type=EST; length=280bpback to top |