FC876905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_OCHA4 (ATP synthase subunit beta OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=atpD PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.382e-33 Identity = 74/91 (81.32%), Postives = 81/91 (89.01%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGV KLG + SK ALVYGQMNEPPGARARV L+GLTVAE+FRD +GQDVL F+DNIFRFTQA SE+SALLGRIPSAVGYQPTLATD+G Sbjct: 241 ESGVNKLGGGEG-SKAALVYGQMNEPPGARARVALSGLTVAENFRD-KGQDVLFFVDNIFRFTQAGSELSALLGRIPSAVGYQPTLATDMG 329
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_HYPNA (ATP synthase subunit beta OS=Hyphomonas neptunium (strain ATCC 15444) GN=atpD PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.382e-33 Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ES VI L + +S+ +LVYGQMNEPPGARARV LTGLT AE+FRD EG+DVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 200 ESNVINL---EGESRMSLVYGQMNEPPGARARVALTGLTQAEYFRDVEGKDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 287
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB1_GLUOX (ATP synthase subunit beta 1 OS=Gluconobacter oxydans GN=atpD1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.382e-33 Identity = 70/93 (75.27%), Postives = 82/93 (88.17%), Query Frame = 3 Query: 3 ESGVIKLGDKQAD--SKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ++GVIK+ + + SK ALVYGQMNEPPGAR+RV LTGL++AE+FRD EGQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLAT++G Sbjct: 208 DAGVIKIAEDGSTEGSKVALVYGQMNEPPGARSRVALTGLSLAEYFRDEEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMG 300
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_SILPO (ATP synthase subunit beta OS=Silicibacter pomeroyi GN=atpD PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.111e-33 Identity = 72/91 (79.12%), Postives = 79/91 (86.81%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ES VIKL + + +S+ ALVYGQMNEPPGARARV LTGLT+AE FRD G DVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 197 ESNVIKLENLE-ESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 286
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_PARL1 (ATP synthase subunit beta OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=atpD PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.111e-33 Identity = 74/95 (77.89%), Postives = 81/95 (85.26%), Query Frame = 3 Query: 3 ESGVIKLGDKQ----ADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGV K ++ SKCALV+GQMNEPPGARARV LTGLTVAEHFRD +GQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTL+TD+G Sbjct: 197 ESGVNKDPNENNGDTTGSKCALVFGQMNEPPGARARVALTGLTVAEHFRD-KGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMG 290
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_CAUCR (ATP synthase subunit beta OS=Caulobacter crescentus GN=atpD PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.111e-33 Identity = 66/78 (84.62%), Postives = 75/78 (96.15%), Query Frame = 3 Query: 42 SKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 S+CALVYGQMNEPPGARARV LTGL++AE+FRD EG+DVLLF+DNIFRFTQA +EVSALLGRIPSAVGYQPTLAT++G Sbjct: 275 SRCALVYGQMNEPPGARARVALTGLSIAEYFRDEEGKDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMG 352
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB2_DINSH (ATP synthase subunit beta 2 OS=Dinoroseobacter shibae (strain DFL 12) GN=atpD2 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.111e-33 Identity = 72/91 (79.12%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ES VIK D ++S+ ALVYGQMNEPPGARARV LTGLT+AE FRD G DVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 197 ESNVIK-PDNLSESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 286
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_RICRS (ATP synthase subunit beta OS=Rickettsia rickettsii (strain Sheila Smith) GN=atpD PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 4.062e-33 Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDA-EGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 +SGVI L + + SK ALVYGQMNEPPGARARV L+GLT+AE FRD EGQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 199 DSGVINLAEPEK-SKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 289
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_RICRO (ATP synthase subunit beta OS=Rickettsia rickettsii (strain Iowa) GN=atpD PE=3 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 4.062e-33 Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDA-EGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 +SGVI L + + SK ALVYGQMNEPPGARARV L+GLT+AE FRD EGQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 199 DSGVINLAEPEK-SKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 289
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_RICPU (ATP synthase subunit beta OS=Rickettsia peacockii (strain Rustic) GN=atpD PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 4.062e-33 Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDA-EGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 +SGVI L + + SK ALVYGQMNEPPGARARV L+GLT+AE FRD EGQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 199 DSGVINLAEPEK-SKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 289 The following BLAST results are available for this feature:
BLAST of FC876905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876905 ID=FC876905; Name=FC876905; organism=Citrus clementina; type=EST; length=280bpback to top |