FC876905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_RICM5 (ATP synthase subunit beta OS=Rickettsia massiliae (strain Mtu5) GN=atpD PE=3 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 4.062e-33 Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDA-EGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 +SGVI L + + SK ALVYGQMNEPPGARARV L+GLT+AE FRD EGQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 199 DSGVINLAEPEK-SKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 289
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_RICCN (ATP synthase subunit beta OS=Rickettsia conorii GN=atpD PE=3 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 4.062e-33 Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDA-EGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 +SGVI L + + SK ALVYGQMNEPPGARARV L+GLT+AE FRD EGQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 199 DSGVINLAEPEK-SKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 289
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_RICAE (ATP synthase subunit beta OS=Rickettsia africae (strain ESF-5) GN=atpD PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 4.062e-33 Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDA-EGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 +SGVI L + + SK ALVYGQMNEPPGARARV L+GLT+AE FRD EGQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 199 DSGVINLAEPEK-SKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 289
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_JANSC (ATP synthase subunit beta OS=Jannaschia sp. (strain CCS1) GN=atpD PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 4.062e-33 Identity = 72/91 (79.12%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI + D +SK ALVYGQMNEPPGAR R+ L+GLT+AE FRDA G DVL FIDNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 197 ESGVI-VPDNLPESKIALVYGQMNEPPGARMRIALSGLTLAEQFRDATGADVLFFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 286
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_ZYMMO (ATP synthase subunit beta OS=Zymomonas mobilis GN=atpD PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.306e-33 Identity = 73/96 (76.04%), Postives = 81/96 (84.38%), Query Frame = 3 Query: 3 ESGVIKLGDKQAD-----SKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 E+GVI DK + SK ALVYGQMNEPPGARARV L+GLT+AE+FRD EGQDVL F+DNIFRFTQA +EVSALLGRIPSAVGYQPTLATD+G Sbjct: 202 EAGVIA-SDKDGNAISEGSKVALVYGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMG 296
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_SILST (ATP synthase subunit beta OS=Silicibacter sp. (strain TM1040) GN=atpD PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.306e-33 Identity = 72/91 (79.12%), Postives = 77/91 (84.62%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ES VIK D +S+ ALVYGQMNEPPGARARV LTGLT+AE FRD G DVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 197 ESNVIK-PDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 286
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_PEDPA (ATP synthase subunit beta OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=atpD PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.306e-33 Identity = 67/77 (87.01%), Postives = 72/77 (93.51%), Query Frame = 3 Query: 45 KCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 + A+VYGQMNEPPGAR RV LTGLT+AEHFRD EGQDVLLFIDNIFRFTQA SEVSALLGRIPSAVGYQPTLAT++G Sbjct: 205 RTAMVYGQMNEPPGARMRVALTGLTIAEHFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMG 281
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_MAGSM (ATP synthase subunit beta OS=Magnetococcus sp. (strain MC-1) GN=atpD PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.306e-33 Identity = 71/91 (78.02%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI + +SK AL+YGQMNEPPGARARV LTGLTVAE+FRD GQDVL F+DNIFRFTQA +EVSALLGRIPSAVGYQPTL TD+G Sbjct: 198 ESGVIDPNSWE-NSKAALIYGQMNEPPGARARVALTGLTVAEYFRDLGGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLGTDMG 287
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_BARBK (ATP synthase subunit beta OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=atpD PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.306e-33 Identity = 69/78 (88.46%), Postives = 74/78 (94.87%), Query Frame = 3 Query: 42 SKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 SKCALVYGQMNEPPGARARV L+GLT+AE+FRD EGQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 272 SKCALVYGQMNEPPGARARVALSGLTIAENFRD-EGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 348
BLAST of FC876905 vs. ExPASy Swiss-Prot
Match: ATPB_ALKMQ (ATP synthase subunit beta OS=Alkaliphilus metalliredigens (strain QYMF) GN=atpD PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.306e-33 Identity = 72/91 (79.12%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI K +LVYGQMNEPPGAR RVGLTGLT+AE+FRD EGQDVLLFIDNIFRFTQA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 199 ESGVI--------DKTSLVYGQMNEPPGARMRVGLTGLTMAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 281 The following BLAST results are available for this feature:
BLAST of FC876905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876905 ID=FC876905; Name=FC876905; organism=Citrus clementina; type=EST; length=280bpback to top |