FC876912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO4_YEAST (GTP-binding protein RHO4 OS=Saccharomyces cerevisiae GN=RHO4 PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 2.984e-43 Identity = 86/184 (46.74%), Postives = 119/184 (64.67%), Query Frame = 3 Query: 162 LKKIKMSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 +K+ +K V VGDGAVGKTCLLISY TFPTDY+PT+F+N+ N+ NG + L LWDTAGQE+Y+RLRPLSY ADV ++ +S+ SK S +NV W PE+KH+ P PI+LVG K DL + + + + E L K +GA A+I+CS++ ++N+ VF+ AI +L Sbjct: 62 MKRTNKLPDYHLKIVVVGDGAVGKTCLLISYVQGTFPTDYIPTIFENYVTNIEGPNGQIIELALWDTAGQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDLWFPEVKHFCPSTPIMLVGLKSDLYEADNL------SDLVEPSSAESLAKRLGAFAHIQCSARLKENIDEVFETAIHTLL 239
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOV_BOVIN (Rho-related GTP-binding protein RhoV OS=Bos taurus GN=Rhov PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.898e-43 Identity = 87/173 (50.29%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID-----HPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI 698 IKCV VGDGAVGK+ L++SYT N +P Y PT D FS V+V+G+ V + LWDTAGQED +RLR L Y DVF+ FS++ +S++N+++KW+PE++ + P P++LVGT+ DLRDD I G VP AQG L + I A Y+ECS+ TQ+N+K VFD+AI Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDLDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDVNVLIQLDQGGREGPVPQPQAQG--LAEKIRACCYLECSALTQKNLKEVFDSAI 202
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO1_SCHPO (GTP-binding protein rho1 OS=Schizosaccharomyces pombe GN=rho1 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.934e-42 Identity = 84/173 (48.55%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ TFP YVPTVF+N+ A+V V+G V L LWDTAGQEDY+RLRPLSY + V ++ F++ S S +NV +KWI E+ H+ +PI+LV K DLR+D + + P++T +G+ + + IGA Y+ECS+KT + V+ VF++A R + Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATRAAM 180
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO_DISOM (Ras-like GTP-binding protein O-RHO OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.765e-41 Identity = 84/172 (48.84%), Postives = 113/172 (65.70%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDD-KQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P +PIILVG K D+ + + P+ +E+ I A Y+ECS+KT++ V+ VF+ A R L Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNIPIILVGNKKTAGDEHTRRELAKMKQEPVKPDDAKEMGSRIKAFGYLECSAKTKEGVREVFELASRAAL 178
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO5_SCHPO (GTP-binding protein rho5 OS=Schizosaccharomyces pombe GN=rho5 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.765e-41 Identity = 83/170 (48.82%), Postives = 115/170 (67.65%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIR 701 K V VGDGA GKTCLLI ++ TFP YVPTVF+N+ A+V V+G + L LWDTAGQEDY+RLRPLSY + V ++ FS+ + S +NV +KWI E+ H+ +PI+LVG K+DLR+D + + PI+ +G+ + + IGA Y+ECS+K + V VF+ A R Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRNDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAAR 177
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RACL_DICDI (Rho-related protein racL OS=Dictyostelium discoideum GN=racL PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.061e-40 Identity = 89/175 (50.86%), Postives = 116/175 (66.29%), Query Frame = 3 Query: 189 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPG-VPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRV 704 ++IK V GDGAVGKT LLI++ S FP DY PTVFDNFS + NLGL+DTAGQED++RLRPL Y D+F++ +S+I+ SY NV KW E+K Y +P+ILVGT+ DLR DK + + PIS +G +RK IGA A+ ECS + +NVK VF+ AI+V Sbjct: 2 QYIKMVICGDGAVGKTSLLIAFASGEFPRDYQPTVFDNFSTLYMFQNKAYNLGLFDTAGQEDFDRLRPLGYNDTDLFLICYSVINPPSYANVYDKWYSEIKLYTGSEIPLILVGTQNDLRHDKATRETLALKQQAPISYEEGMMMRKRIGAKAFTECSVVSGKNVKQVFEEAIKV 176
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: CRL1_CANAL (GTP-binding RHO-like protein OS=Candida albicans GN=CRL1 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.880e-40 Identity = 92/196 (46.94%), Postives = 121/196 (61.73%), Query Frame = 3 Query: 114 VIFSEILYFGN*KATVLKKIKMSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI 698 VI E Y N K L K + + +K V VGDG GKTCLL++YT N FP+ YVPTVF+N+ V NG TV L LWDTAGQE+Y+RLRPLSY D+ ++ F++ ++ S ENV W PE+ HY PG+PIILVGTK DL D ++H ++ ++ K IGA I S+KT NV+ VF+ A+ Sbjct: 51 VIIEEDPYIPNYKELSLANKKTNYN--MKIVVVGDGGCGKTCLLLAYTQNKFPSIYVPTVFENYVTAVQSPNGKTVELALWDTAGQEEYDRLRPLSYPDVDILLVCFAVDNEVSLENVKDMWFPEVNHYCPGIPIILVGTKSDLLSD----MNHDASIRVA--------KEIGAIGLIFTSAKTMFNVRTVFNFAL 232
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO5_YEAST (GTP-binding protein RHO5 OS=Saccharomyces cerevisiae GN=RHO5 PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 8.986e-40 Identity = 92/217 (42.40%), Postives = 122/217 (56.22%), Query Frame = 3 Query: 189 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVN------------------------------LGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-----------PGVPIILVGTKLDLRDD--KQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 R IKCV +GDGAVGKT LLISYT+N+FPTDYVPTVFDN+S + + T + + LWDTAGQEDY+RLRPL Y D+F++ FS+ AS+ NV++KW+PELK + PI+LVGTK DLRDD Q + + +S + +EL + G Y ECS+ TQ V+ VF+ A+R + Sbjct: 2 RSIKCVIIGDGAVGKTSLLISYTTNSFPTDYVPTVFDNYSTTIAIPNGTASSPLELDNGNDKRGSLSSASSSPSTDRKLYKINLWDTAGQEDYDRLRPLCYPQTDIFLICFSVSEHASFANVTEKWLPELKQTSNIEGTSLYTKLGKYPILLVGTKSDLRDDPATQKKLQEANSDYVSQEEIDELVQRCGFMGYTECSAATQAGVREVFEQAVRYAI 218
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RACG_DICDI (Rho-related protein racG OS=Dictyostelium discoideum GN=racG PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 8.986e-40 Identity = 81/170 (47.65%), Postives = 113/170 (66.47%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI 698 IK VG+G +GKT +L+SYTSN+ +Y PTVFDN+S ++ N NL LWDTAGQE++++LR LSY DVF+L FSLI+ +S+ N+ W+ EL P PI+LVGT++DL+ + + +PIST QG EL K I A ++ECS+ TQ+N+ VF+ AI Sbjct: 4 IKVCVVGEGGIGKTSMLLSYTSNSISNEYQPTVFDNYSTLLMHNKKPYNLSLWDTAGQEEFSKLRRLSYPQTDVFLLCFSLINPSSFSNILDSWVQELNENCPNTPIVLVGTQMDLKSNSVILDRLCEKKQLPISTQQGIELSKKINAFDFVECSALTQKNLHLVFEKAI 173
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOD_MOUSE (Rho-related GTP-binding protein RhoD OS=Mus musculus GN=Rhod PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.174e-39 Identity = 77/174 (44.25%), Postives = 113/174 (64.94%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 +K V VGDG GKT L++ + FP Y PTVF+ ++A + + G V+L +WDTAGQ+DY+RLRPL Y A+V +L F + + S++NVS +W PE+ H+ GVPII+VG K+DLR DK + P++ +G ++ + +GA AY+ECS++ NV+AVF A V L Sbjct: 18 VKVVLVGDGGCGKTSLMMVFAKGAFPESYSPTVFERYNATLQMKGKPVHLQIWDTAGQDDYDRLRPLFYPDANVLLLCFDVTNPNSFDNVSNRWYPEVTHFCKGVPIIVVGCKIDLRKDKVLVNNLRKKRLEPVTYHRGHDMARSVGAVAYLECSARLHDNVEAVFQEAAEVAL 191 The following BLAST results are available for this feature:
BLAST of FC876912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876912 ID=FC876912; Name=FC876912; organism=Citrus clementina; type=EST; length=841bpback to top |