FC876912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOH_MOUSE (Rho-related GTP-binding protein RhoH OS=Mus musculus GN=Rhoh PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.368e-34 Identity = 69/172 (40.12%), Postives = 110/172 (63.95%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 IKCV VGD AVGKT LL+ +TS TFP Y PTV++N +V ++G ++LGLWDTAG + + +RPLSY+ ADV ++ +S+ + S+ N+ KWI E++ P P+++V T+ D R+ + A I+ +G+ L + + A Y+ECS+ + + V+ VF+ A+R + Sbjct: 5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWISEIRSNLPCTPVLVVATQTDQRE-----VGPHRASCINAIEGKRLAQDVRAKGYLECSALSNRGVQQVFECAVRTAV 171
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOH_BOVIN (Rho-related GTP-binding protein RhoH OS=Bos taurus GN=RHOH PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.623e-34 Identity = 68/172 (39.53%), Postives = 111/172 (64.53%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 IKCV VGD AVGKT LL+ +TS TFP Y PTV++N +V+++G ++LGLWDTAG + + +RPLSY+ ADV ++ +S+ + S+ N+ KWI E++ P P+++V T+ D R+ + A ++ +G+ L + + A Y+ECS+ + + V+ VF+ A+R + Sbjct: 5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVLMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEVRSNLPCTPVLVVATQTDQRE-----VGPHRASCVNAIEGKRLAQDVRAKGYLECSALSNRGVQQVFECAVRTAV 171
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO3_SCHPO (GTP-binding protein rho3 OS=Schizosaccharomyces pombe GN=rho3 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 1.257e-33 Identity = 74/171 (43.27%), Postives = 104/171 (60.82%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V +GDGA GKT LL +T FP Y PT+F+N+ ++ V+G+++ L LWDTAGQE+Y++LR LSY V ++ F++ S+ S ENV KW+PE+ PGV ++LV K DLR + +DH + I +G K I A Y+ECS+K + V F A RV L Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGADEEQVDH--SKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAARVAL 183
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOH_HUMAN (Rho-related GTP-binding protein RhoH OS=Homo sapiens GN=RHOH PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.641e-33 Identity = 68/172 (39.53%), Postives = 111/172 (64.53%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 IKCV VGD AVGKT LL+ +TS TFP Y PTV++N +V ++G ++LGLWDTAG + + +RPLSY+ ADV ++ +S+ + S+ N+ KWI E++ P P+++V T+ D R+ + A ++ +G++L + + A Y+ECS+ + + V+ VF+ A+R + Sbjct: 5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQRE-----MGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAV 171
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RACI_DICDI (Rho-related protein racI OS=Dictyostelium discoideum GN=racI PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.800e-33 Identity = 72/175 (41.14%), Postives = 107/175 (61.14%), Query Frame = 3 Query: 192 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGV--PIILVGTKLDLRDDK---QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIR 701 +IK + +GD GKT ++++Y++ +FPT YVP+ D S ++ N ++G WD++ +++ RP +Y +V IL FS+ S S+ENVSKKWIPE++ YAP + PIIL+GTK DLR+D+ ++ PIS QG L K I A Y+ECSS Q V +F +R Sbjct: 5 YIKLLVLGDSKTGKTTMMMTYSTGSFPTGYVPSHVDATSLDIEYNKQVCHVGFWDSSALAEFDNTRPSTYPNTNVIILCFSIDSPTSFENVSKKWIPEIRQYAPSIHTPIILLGTKCDLREDENTINLLKENNQMPPISYKQGLALSKEIKATMYLECSSLCNQGVNEIFKQVVR 179
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO1_ENTHI (Ras-like GTP-binding protein RHO1 OS=Entamoeba histolytica GN=RHO1 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.776e-33 Identity = 73/173 (42.20%), Postives = 110/173 (63.58%), Query Frame = 3 Query: 180 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI 698 + + +K V VGDGAVGKTCLL++++ PT YVPTVF+NFS + L LWDTAGQE+Y+RLRPLSY +DV +L F++ ++ S++N+S KW PE+KH + +IL K+DLR D + ++ +G++L + +G AYIE SS + + VF+ ++ Sbjct: 16 NGKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILDLWDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKH----LYLILQRLKVDLRKDV--------SDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSV 176
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO2_YEAST (GTP-binding protein RHO2 OS=Saccharomyces cerevisiae GN=RHO2 PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 6.238e-33 Identity = 77/172 (44.77%), Postives = 102/172 (59.30%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPG-AVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V +GDGA GKT LL +T FP Y PTVF+N+ + V+G V+L LWDTAGQE+Y RLRP SY AD+ ++ F++ + S N KW E Y P PI+LVG K DLR + F + VPI A +++ + IGA Y+ECS+ T + V VF+ A R L Sbjct: 9 KLVIIGDGACGKTSLLYVFTLGKFPEQYHPTVFENYVTDCRVDGIKVSLTLWDTAGQEEYERLRPFSYSKADIILIGFAVDNFESLINARTKWADEALRYCPDAPIVLVGLKKDLRQEAHFKENATDEMVPIEDA--KQVARAIGAKKYMECSALTGEGVDDVFEVATRTSL 178
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO3_SCHCO (GTP-binding protein Rho3 OS=Schizophyllum commune GN=RHO3 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.942e-30 Identity = 73/166 (43.98%), Postives = 97/166 (58.43%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEE---LRKLIGAPAYIECSSKTQQNVKAVF 686 K V GDGA GKT LL +T F Y PTVF+N+ ++ ++ V L LWDTAGQE+++RLR LSY V ++ FS+ + S ENV KW+ E+ Y PGV ++LV +K DLRDD +D T Q EE + + I A Y+ECSSK + V VF Sbjct: 19 KVVVCGDGACGKTSLLNVFTRGFFTQVYEPTVFENYVHDLYIDDQLVELSLWDTAGQEEFDRLRSLSYAETHVIMICFSVDNPTSLENVESKWLDEILEYCPGVKLVLVDSKCDLRDDPA-VLDRLQRYGTHTDQYEEGLGVARRIRASRYLECSSKHNRGVNEVF 183
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO3_ASHGO (GTP-binding protein RHO3 OS=Ashbya gossypii GN=RHO3 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.942e-30 Identity = 73/186 (39.25%), Postives = 102/186 (54.84%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDH---PGAVP------------ISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V +GDGA GKT LL +T FP Y PTVF+N+ ++ V+ + L LWDTAGQE+++RLR LSY +L FS+ S+ S ENV KW+ E+ + GV ++LV K DLR ++ + PG++ I +G + K IGA Y+ECS+K + V F A R L Sbjct: 17 KIVILGDGACGKTSLLNVFTRGYFPKVYEPTVFENYIHDIFVDNQHITLSLWDTAGQEEFDRLRSLSYSDTHTIMLCFSVDSRDSLENVKNKWVSEIADHCEGVKLVLVALKCDLRSSDEYGNESAITPGSIQNQKYNGGGGNGLIPYDEGLAMAKQIGALRYLECSAKMNRGVNEAFTEAARCAL 202
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RND3_RAT (Rho-related GTP-binding protein RhoE OS=Rattus norvegicus GN=Rnd3 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.101e-29 Identity = 66/178 (37.08%), Postives = 106/178 (59.55%), Query Frame = 3 Query: 177 MSASRFIKC--VTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAQGEELRKLIGAPAYIECSS-KTQQNVKAVFDAA 695 M ++ +KC V VGD GKT LL + + FP +YVPTVF+N++A+ ++ + L LWDT+G Y+ +RPLSY +D ++ F + + ++V KKW E++ + P ++LVG K DLR D ++ + P+S QG + K IGA YIECS+ +++ +V+ +F A Sbjct: 16 MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVA 193 The following BLAST results are available for this feature:
BLAST of FC876912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876912 ID=FC876912; Name=FC876912; organism=Citrus clementina; type=EST; length=841bpback to top |