FC876912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RACA_ENTHI (Rho-related protein racA OS=Entamoeba histolytica GN=RACA PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.129e-57 Identity = 104/174 (59.77%), Postives = 134/174 (77.01%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 +KCV VGDGAVGKTCLLISYT+N FP +Y+PTVFDN+SA V+V+ +NLGLWDTAGQEDY+RLRPLSY DVF++ FS++S S++NVS KW PE+ H+ P P +LVGTKLD+R+DK+ ++ PI+T QGE K IGA YIECS+ TQ+N++ VFD A+R V+ Sbjct: 4 VKCVIVGDGAVGKTCLLISYTTNAFPNEYIPTVFDNYSATVMVDSKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVVSPPSFDNVSSKWQPEVSHHCPKTPCLLVGTKLDMREDKEQLKRLEEKKITPITTEQGEAKCKDIGAVKYIECSALTQKNLRLVFDEAVRAVI 177
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RECG_ENTHI (Rho-related protein racG OS=Entamoeba histolytica GN=RACG PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 4.015e-56 Identity = 105/176 (59.66%), Postives = 134/176 (76.14%), Query Frame = 3 Query: 189 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 R +K V VGDGAVGKTC+LISYT+N FP +Y+PTVF+N+++++VV+ +NLGLWDTAGQEDY+RLRPLSY DVF++ FS+I+ ASYENV KW PE+ + P VPIILVGTK+D+RDD + + VPI QG+EL K IGA YIECS+ TQ N+K VF+ A+R VL Sbjct: 2 RPVKLVIVGDGAVGKTCMLISYTTNAFPNEYIPTVFENYNSSLVVDDVKINLGLWDTAGQEDYDRLRPLSYPSTDVFLVCFSVIAPASYENVEGKWKPEIDQHCPNVPIILVGTKIDIRDDPEQVKRLAEKNIVPIQPPQGDELAKKIGAVKYIECSALTQANLKLVFEEAVRAVL 177
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RAC1_CAEEL (Ras-related protein ced-10 OS=Caenorhabditis elegans GN=ced-10 PE=1 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 1.168e-55 Identity = 106/174 (60.92%), Postives = 130/174 (74.71%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 IKCV VGDGAVGKTCLLISYT+N FP +Y+PTVFDN+SANV+V+G +NLGLWDTAGQEDY+RLRPLSY DVF++ F+L + AS+ENV KW PE+ H+ P PIILVGTK DLR+D+ + P+S QG + K I A Y+ECS+ TQ+ +K VFD AIR VL Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLREDRDTVERLRERRLQPVSQTQGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVL 177
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RACB_DICDI (Rho-related protein racB OS=Dictyostelium discoideum GN=racB PE=1 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.526e-55 Identity = 106/174 (60.92%), Postives = 133/174 (76.44%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 IK V VGDGAVGKTCLLISYTSN+FPT+YVPTVFDN+SANV+V+ TV+LGLWDTAGQEDY+RLRPLSY DVF++ F++IS+ SY NV KW PE+ H+ P IILVGTK DLR+DK+ + P++ QGE++ K I A Y+ECS+ TQ+ +K VFD AI+ V+ Sbjct: 4 IKLVVVGDGAVGKTCLLISYTSNSFPTEYVPTVFDNYSANVMVDNKTVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICFAIISQTSYTNVKSKWWPEVTHHCPNCTIILVGTKCDLREDKESLEKLREKHQQPLTFQQGEQMAKEIKAFCYMECSALTQKGLKQVFDEAIKAVI 177
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RACC_DICDI (Rho-related protein racC OS=Dictyostelium discoideum GN=racC PE=1 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.758e-54 Identity = 102/180 (56.67%), Postives = 129/180 (71.67%), Query Frame = 3 Query: 177 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 MSA+ IK V +GDGAVGKTCLLISY +N FP DY+PTVFDN+ N+ + LGLWDTAGQE+Y++LRPLSY A+VF++ FS+ + S+ENV KW PE+ H+ P VP ILVGTKLD RDD+ + G PI+T QG +L + I A Y+ECS+KT QN+K VFD AI+ VL Sbjct: 1 MSAAEVIKLVVIGDGAVGKTCLLISYANNRFPEDYIPTVFDNYVVNLTAGDRNIELGLWDTAGQEEYDKLRPLSYANANVFLICFSITNPVSFENVYTKWYPEVMHFCPEVPQILVGTKLDTRDDRGVLDKLQQTGHKPITTEQGNDLARRIKAIKYMECSAKTSQNLKQVFDEAIKSVL 180
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: CDC42_CANAL (Cell division control protein 42 homolog OS=Candida albicans GN=CDC42 PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 9.256e-53 Identity = 101/174 (58.05%), Postives = 127/174 (72.99%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 IKCV VGDGAVGKTCLLISYT++ FP DYVPTVFDN++ V++ LGL+DTAGQEDY+RLRPLSY DVF++ FS+IS AS+ENV +KW PE+ H+ PGVPII+VGT+ DLR+D + PI+ QGE+L K + A Y+ECS+ TQ+ +K VFD AI L Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTSKFPADYVPTVFDNYAVTVMIGDEPFTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVISPASFENVKEKWFPEVHHHCPGVPIIIVGTQTDLRNDDVILQRLHRQKLSPITQEQGEKLAKELRAVKYVECSALTQRGLKTVFDEAIVAAL 177
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: CDC42_SCHPO (Cell division control protein 42 homolog OS=Schizosaccharomyces pombe GN=cdc42 PE=1 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.579e-52 Identity = 100/174 (57.47%), Postives = 128/174 (73.56%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 IKCV VGDGAVGKTCLLISYT+N FP+DYVPTVFDN++ V++ LGL+DTAGQEDY+RLRPLSY DVF++ FS+ S AS+ENV +KW PE+ H+ PGVP ++VGT++DLRDD Q + P++ QGE L + +GA Y+ECS+ TQ+ +K VFD AI L Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDPSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAIVAAL 177
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: CDC42_YEAST (Cell division control protein 42 OS=Saccharomyces cerevisiae GN=CDC42 PE=1 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 3.517e-52 Identity = 98/174 (56.32%), Postives = 126/174 (72.41%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 +KCV VGDGAVGKTCLLISYT+N FP DYVPTVFDN++ V++ LGL+DTAGQEDY+RLRPLSY DVF++ FS+IS S+ENV +KW PE+ H+ PGVP ++VGT++DLRDDK + PI++ QG L + + A Y+ECS+ TQ+ +K VFD AI L Sbjct: 4 LKCVVVGDGAVGKTCLLISYTTNQFPADYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVISPPSFENVKEKWFPEVHHHCPGVPCLVVGTQIDLRDDKVIIEKLQRQRLRPITSEQGSRLARELKAVKYVECSALTQRGLKNVFDEAIVAAL 177
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOQ_HUMAN (Rho-related GTP-binding protein RhoQ OS=Homo sapiens GN=RHOQ PE=1 SV=2) HSP 1 Score: 204.912 bits (520), Expect = 4.594e-52 Identity = 96/174 (55.17%), Postives = 131/174 (75.29%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 +KCV VGDGAVGKTCLL+SY ++ FP +YVPTVFD+++ +V V G LGL+DTAGQEDY+RLRPLSY DVF++ FS+++ AS++NV ++W+PELK YAP VP +L+GT++DLRDD + ++ PI QG++L K IGA Y+ECS+ TQ+ +K VFD AI +L Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 183
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RACC_ENTHI (Rho-related protein racC OS=Entamoeba histolytica GN=RACC PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.594e-52 Identity = 99/174 (56.90%), Postives = 125/174 (71.84%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 IK V VGDGAVGKTCLLI YT+N FP DY+PTVFDN+ ++ + L LWDTAGQE+Y++LRPLSY A +F++ FS+ S SY+NV KW PE+ H+AP VPIILVGTKLD R+D + G I+TA+GEEL+ I A YIECS+KT +N+K VFD A++ VL Sbjct: 8 IKLVVVGDGAVGKTCLLICYTTNEFPKDYIPTVFDNYVVSLTAGTRQIQLALWDTAGQEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTRNDPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKTVL 181 The following BLAST results are available for this feature:
BLAST of FC876912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876912 ID=FC876912; Name=FC876912; organism=Citrus clementina; type=EST; length=841bpback to top |