FC876912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.439e-15 Identity = 52/172 (30.23%), Postives = 87/172 (50.58%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVV 707 K + +G+ +VGKT L Y +TF +V TV +F V + V L +WDTAGQE Y + YRGA FIL + + ++ S+ N + W ++K Y+ +ILVG K D+ +++ + T +G L + +G + E S+K +V+ F+ + + Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEEER----------VVPTEKGRLLAEQLGFD-FFEASAKENISVRQAFERLVDAI 183
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.439e-15 Identity = 52/172 (30.23%), Postives = 87/172 (50.58%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVV 707 K + +G+ +VGKT L Y +TF +V TV +F V + V L +WDTAGQE Y + YRGA FIL + + ++ S+ N + W ++K Y+ +ILVG K D+ +++ + T +G L + +G + E S+K +V+ F+ + + Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEEER----------VVPTEKGRLLAEQLGFD-FFEASAKENISVRQAFERLVDAI 183
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RAB31_RAT (Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.439e-15 Identity = 53/177 (29.94%), Postives = 93/177 (52.54%), Query Frame = 3 Query: 183 ASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGL-WDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP-GVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVV 707 A R +K +GD VGK+ ++ + + F + PT+ +F V G+ ++ L WDTAGQE ++ L P+ YRG+ ++ + + + S+ + KKW+ ELK + P + + + G K DL D ++ VP+ A +E + IGA +E S+K N++ +F R + Sbjct: 2 AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTL-KKWVKELKEHGPENIVMAIAGNKCDLSDIRE--------VPLKDA--KEYAESIGA-LVVETSAKNAINIEELFQGISRQI 166
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RAB31_MOUSE (Ras-related protein Rab-31 OS=Mus musculus GN=Rab31 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.439e-15 Identity = 53/177 (29.94%), Postives = 93/177 (52.54%), Query Frame = 3 Query: 183 ASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGL-WDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP-GVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVV 707 A R +K +GD VGK+ ++ + + F + PT+ +F V G+ ++ L WDTAGQE ++ L P+ YRG+ ++ + + + S+ + KKW+ ELK + P + + + G K DL D ++ VP+ A +E + IGA +E S+K N++ +F R + Sbjct: 2 AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTL-KKWVKELKEHGPENIVMAIAGNKCDLSDIRE--------VPLKDA--KEYAESIGA-IVVETSAKNAINIEELFQGISRQI 166
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RAS_LENED (Ras-like protein OS=Lentinula edodes PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.491e-15 Identity = 52/175 (29.71%), Postives = 88/175 (50.29%), Query Frame = 3 Query: 189 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVV 707 R K V VG G VGK+ L I + + F +Y PT+ D++ V++ L + DTAGQE+Y +R R + F+L +S+ S+ S+E +S + I +K P+++V K DL ++Q + +G +L + G ++E S+K + NV F +R + Sbjct: 9 REYKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCVIDDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISTFHQQILRVKD-QDTFPVVVVANKCDLEYERQ----------VGMNEGRDLARHFGC-KFVETSAKVRINVDQAFQDLVREI 171
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RAB34_RAT (Ras-related protein Rab-34 OS=Rattus norvegicus GN=Rab34 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.491e-15 Identity = 59/166 (35.54%), Postives = 88/166 (53.01%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSAN-VVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPE-LKHYAP-GVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 686 K + VGD +VGKTCL+ + +TF +Y T+ +F V G +L LWDTAGQE + + YRGA I+ F+L AS E+ SK+W+ + LK P V + LVG+K DL Q+ + A+ ++ +E++ Y SS T +NV+ F Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGVPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEH-SKQWLADALKENDPSNVLLFLVGSKKDLSTPAQYSLMEKDALKVA----QEIK-----AEYWSVSSLTGENVREFF 209
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RAB21_GEOCY (Ras-related protein Rab-21 OS=Geodia cydonium GN=RAB21 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.491e-15 Identity = 52/172 (30.23%), Postives = 89/172 (51.74%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKH-YAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVV 707 K V +G+GAVGKT L++ Y+ N F + T+ +F + + G + L +WDTAGQE Y+ L P+ YR + I+ + + + S+ ++ WI ELK V + +VG K+DL D+Q + A+ E + +GA Y + +++ + D A R++ Sbjct: 18 KVVLLGEGAVGKTSLVLRYSENKFNDKHEQTLQASFVEKRLNIGGKRIQLAIWDTAGQERYHALGPIYYRDSQGAIIVYDITDEDSFHK-ARNWIKELKRMLGDKVTLCIVGNKIDL--DRQRTVSEKDAL--------EYAESVGAKHYYTSAKQSKGVAELFLDLAKRIL 178
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.491e-15 Identity = 39/122 (31.97%), Postives = 70/122 (57.38%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDK 554 +K + +GD VGK+C+L+ + N F Y+ T+ +F + ++G + L +WDTAGQE + + YRGA I+ + + S S+ ++ K+W+ ++ +A P V ++VG K DL + Sbjct: 34 LKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSI-KRWLIDVDRFASPSVLKLIVGNKCDLNSKR 154
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.491e-15 Identity = 57/172 (33.14%), Postives = 87/172 (50.58%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVV 707 K V +GD VGK+ LL +T N F + T+ F+ + V G TV +WDTAGQE Y + YRGA +L + + ++ENVS +W+ EL+ +A + I+L+G K DL+ H AV AQ ++ + ++IE S+ NV+ F + V Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVS-RWLKELRDHADSNIVIMLIGNKTDLK--------HLRAVATEDAQSYAEKEGL---SFIETSALEALNVEKAFQTILSEV 173
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RB27A_RAT (Ras-related protein Rab-27A OS=Rattus norvegicus GN=Rab27a PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.865e-15 Identity = 56/185 (30.27%), Postives = 86/185 (46.49%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-----------NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK--HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 IK + +GD VGKT +L YT F + ++ TV +F VV G ++L LWDTAGQE + L +R A F+L F L ++ S+ NV + WI +L+ Y I+L G K DL D + + + EL + G P Y E S+ N+ + + +++ Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGTVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNV-RNWISQLQMHAYCENPDIVLCGNKSDLEDQR----------AVKEEEARELAEKYGIP-YFETSAANGTNISQAIEMLLDLIM 182 The following BLAST results are available for this feature:
BLAST of FC876912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876912 ID=FC876912; Name=FC876912; organism=Citrus clementina; type=EST; length=841bpback to top |