FC876912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RB18B_DANRE (Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.865e-15 Identity = 48/175 (27.43%), Postives = 92/175 (52.57%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 +K + +G+ VGK+ LL+ +T +TF + T+ +F + ++G+ L +WDTAGQE + L P YRGA IL + + + ++ + + W+ EL+ Y ++ LVG K+D +D+++ +D + + + +IE S+KT+ V+ F+ + +L Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKL-ENWLNELETYCTRNDLVKMLVGNKID-KDNRE--VDRNEGLKFARKH---------SMLFIEASAKTRDGVQCAFEELVEKIL 170
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.865e-15 Identity = 55/165 (33.33%), Postives = 83/165 (50.30%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP-GVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 686 K V +GD VGK+ LL +T N F + T+ F+ + G T+ +WDTAGQE Y + YRGA +L + + +A+Y++V ++WI EL+ A + I+LVG K DLR ++ D + E KL +IE S+ NV+ F Sbjct: 15 KIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSV-ERWILELRENADRNIEIMLVGNKSDLRHLREVSTD-------EAKEFSEKHKL----TFIETSALDSSNVELAF 167
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RASV_DICDI (Ras-like protein rasV OS=Dictyostelium discoideum GN=rasV PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.865e-15 Identity = 50/174 (28.74%), Postives = 93/174 (53.45%), Query Frame = 3 Query: 186 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYE---NVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI 698 + ++ +GDG VGKT + + SN F Y PT+ D++ + V+ + L + DTAGQ++ +R R + F+L +S+ K+S+ N ++ I L VPI+++G K DL +++Q ++ +G+EL + +G +++E S+K + N+ VF A+ Sbjct: 31 NNIVQLCIMGDGGVGKTAVTTQFISNHFVYYYDPTIEDSYRKQICVSDKSYILDILDTAGQDELTAMRDQWIRSCEGFVLVYSITCKSSFNQVLNFREQIIRVLDR--DDVPIMMIGNKSDLVNERQ----------VTYHEGKELAQRLGM-SFMEVSAKNRSNIDEVFHEAV 191
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RABQ_DICDI (Ras-related protein RabQ OS=Dictyostelium discoideum GN=rabQ PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.865e-15 Identity = 49/174 (28.16%), Postives = 91/174 (52.30%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSA-NVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHY-APGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 +KC+ G VGK+ LL+ + F + T+ F +++++ S + L +WDTAGQE + + YRGA + +L + + + S++ +S W+ E++ +P + I L+G K D +D + I+T +G + K + E S+K ++V++VFD + VL Sbjct: 6 LKCIVTGPPFVGKSSLLLQFCEKEFSFEMDTTIGVEFQTRSILIDSSKIKLEIWDTAGQESFRSITTNYYRGAHIALLCYDITKRQSFQYLS-GWMDEVRQMSSPNIVIALIGNKCDCKDKR----------VITTEEGAKNAK-ENDILFFETSAKDYESVESVFDGVSKKVL 167
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RAB31_HUMAN (Ras-related protein Rab-31 OS=Homo sapiens GN=RAB31 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.865e-15 Identity = 53/177 (29.94%), Postives = 93/177 (52.54%), Query Frame = 3 Query: 183 ASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGL-WDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP-GVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVV 707 A R +K +GD VGK+ ++ + + F + PT+ +F V G+ ++ L WDTAGQE ++ L P+ YRG+ ++ + + + S+ + KKW+ ELK + P + + + G K DL D ++ VP+ A +E + IGA +E S+K N++ +F R + Sbjct: 2 AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTL-KKWVKELKEHGPENIVMAIAGNKCDLSDIRE--------VPLKDA--KEYAESIGA-IVVETSAKNAINIEELFQGISRQI 166
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RAB12_HUMAN (Putative Ras-related protein Rab-12 OS=Homo sapiens GN=RAB12 PE=5 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 5.865e-15 Identity = 51/166 (30.72%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 686 ++ + +G VGKT L+ +T +TF TV +F V + G + L +WDTAGQE +N + YR A IL + + K +++++ KW+ + YA ++LVG KLD D++ I+ QGE+ + I + E S+K NV +F Sbjct: 43 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDL-PKWMKMIDKYASEDAELLLVGNKLDCETDRE----------ITRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 197
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.660e-15 Identity = 55/165 (33.33%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSA-NVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 686 K V +GD VGK+ LL +T N F + T+ F+ ++ V+G T+ +WDTAGQE Y + YRGA +L + + ++ENV ++W+ EL+ +A + I+LVG K DL+ H V AQ R+ + ++IE S+ NV+ F Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENV-ERWLKELRDHADSNIVIMLVGNKSDLK--------HLRDVQTEVAQAFCEREGL---SFIETSALESTNVEKAF 166
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.660e-15 Identity = 53/169 (31.36%), Postives = 86/169 (50.89%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI 698 K V +GD VGK+ LL +T N F + T+ F+ + ++ + +WDTAGQE Y + YRGA +L + + +YENV+ +W+ EL+ H P + ++L+G K DLR V +ST + + L + G ++E S+ NV+ F A+ Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVT-RWLKELRDHTDPNIVVMLIGNKSDLRH----------LVAVSTDEAKGLAEREGL-YFMETSALEATNVENAFTEAL 171
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RB27A_MOUSE (Ras-related protein Rab-27A OS=Mus musculus GN=Rab27a PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.660e-15 Identity = 56/185 (30.27%), Postives = 86/185 (46.49%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-----------NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK--HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 IK + +GD VGKT +L YT F + ++ TV +F VV G ++L LWDTAGQE + L +R A F+L F L ++ S+ NV + WI +L+ Y I+L G K DL D + + + EL + G P Y E S+ N+ + + +++ Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNV-RNWISQLQMHAYCENPDIVLCGNKSDLEDQR----------AVKEEEARELAEKYGIP-YFETSAANGTNISHAIEMLLDLIM 182
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RAP1B_RAT (Ras-related protein Rap-1b OS=Rattus norvegicus GN=Rap1b PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.660e-15 Identity = 50/175 (28.57%), Postives = 88/175 (50.29%), Query Frame = 3 Query: 189 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVV 707 R K V +G G VGK+ L + + F Y PT+ D++ V V+ L + DTAG E + +R L + F L +S+ +++++ ++ ++ I +K VP+ILVG K DL D++ + QG+ L + A++E S+K++ NV +F +R + Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGNKCDLEDER----------VVGKEQGQNLARQWSNCAFLESSAKSKINVNEIFYDLVRQI 165 The following BLAST results are available for this feature:
BLAST of FC876912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876912 ID=FC876912; Name=FC876912; organism=Citrus clementina; type=EST; length=841bpback to top |