FC876912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOU_BOVIN (Rho-related GTP-binding protein RhoU OS=Bos taurus GN=RHOU PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.767e-46 Identity = 90/170 (52.94%), Postives = 124/170 (72.94%), Query Frame = 3 Query: 195 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFI--DHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI 698 +KCV VGDGAVGKT L++SYT+N +PT+Y+PT FDNFSA V V+G V L L DTAGQ+++++LRPL Y AD+F+L FS++ +S++NVS+KW+PE++ + P PIILVGT+ DLR+D + I D P+ + I A +YIECS+ TQ+N+K VFDAAI Sbjct: 47 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVKLQLCDTAGQDEFDKLRPLCYTNADIFLLCFSVVGPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAARLCAEEIKATSYIECSALTQKNLKEVFDAAI 216
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOU_MOUSE (Rho-related GTP-binding protein RhoU OS=Mus musculus GN=Rhou PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.919e-46 Identity = 89/172 (51.74%), Postives = 124/172 (72.09%), Query Frame = 3 Query: 189 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFI--DHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI 698 R +KCV VGDGAVGKT L++SYT+N +PT+Y+PT FDNFSA V V+G V L L DTAGQ+++++LRPL Y D+F+L FS++S S++NV +KW+PE++ + P PIILVGT+ DLR+D + I D P+ + + + A +YIECS+ TQ+N+K VFDAAI Sbjct: 51 RGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPTSFQNVGEKWVPEIRRHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEVKAVSYIECSALTQKNLKEVFDAAI 222
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOA_EMENI (GTP-binding protein rhoA OS=Emericella nidulans GN=rhoA PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.425e-46 Identity = 92/173 (53.18%), Postives = 121/173 (69.94%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ TFP YVPTVF+N+ A+V V+G V L LWDTAGQEDY+RLRPLSY + V ++ F++ S S +NV +KWI E+ H+ G+PIILVG K DLR D + ++ P++ QGEE+RK IGA Y+ECS++T + V+ VF+AA R L Sbjct: 7 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKDLRHDPKTIEELNKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO1_CANAL (GTP-binding protein RHO1 OS=Candida albicans GN=RHO1 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 8.391e-46 Identity = 93/173 (53.76%), Postives = 122/173 (70.52%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ TFP YVPTVF+N+ A+V V+G V L LWDTAGQEDY+RLRPLSY ++V ++ FS+ S S +NV +KWI E+ H+ GVPIILVG K DLRDD + P+ST++G+++ + IGA Y+ECS+KT + V+ VF+AA R L Sbjct: 11 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRKVELALWDTAGQEDYDRLRPLSYPDSNVILICFSVDSPDSLDNVLEKWISEVLHFCQGVPIILVGCKSDLRDDPHTIEALRQQQQQPVSTSEGQQVAQRIGAADYLECSAKTGRGVREVFEAATRASL 183
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOL_DROME (Ras-like GTP-binding protein RhoL OS=Drosophila melanogaster GN=RhoL PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.096e-45 Identity = 88/175 (50.29%), Postives = 124/175 (70.86%), Query Frame = 3 Query: 189 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLR--DDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVV 707 R +K VGDG VGKTC+LI+YT N FP +Y+PTVFDN + N+ V+ NL LWDTAGQEDY RLRPLSY + F+L +S+ S+ S+ENV KW PE++H++ VP++LVGTKLDLR + ++F ++T +G+++RK I A +ECS+K +QN++ VF+ A+R V Sbjct: 10 RPLKITIVGDGMVGKTCMLITYTRNEFPEEYIPTVFDNHACNIAVDDRDYNLTLWDTAGQEDYERLRPLSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAHVPVVLVGTKLDLRIPNSEKF---------VTTQEGKKMRKEIHAFNLVECSAKKKQNLQQVFEEAVRAV 175
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO1_KLULA (GTP-binding protein Rho1 OS=Kluyveromyces lactis GN=RHO1 PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.439e-45 Identity = 95/173 (54.91%), Postives = 117/173 (67.63%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI + FP YVPTVFDN+ A+V V+G V L LWDTAGQEDY+RLRPLSY ++V ++ +S+ S ENV +KWI E+ H+ GVPIILVG K DLR+D Q + G P+S AQ +E+ IGA YIECS+KT V+ VF+AA R L Sbjct: 14 KLVIVGDGACGKTCLLIVFAKGKFPQVYVPTVFDNYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSIDLPDSLENVMEKWISEVLHFCQGVPIILVGCKADLRNDPQVVEELRAQGLQPVSQAQAQEVADQIGAVDYIECSAKTGYGVREVFEAATRASL 186
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO1_CAEEL (Ras-like GTP-binding protein rhoA OS=Caenorhabditis elegans GN=rho-1 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.439e-45 Identity = 89/173 (51.45%), Postives = 117/173 (67.63%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE++H+ P VPIILVG K DLR D Q + P+ QG + + IGA AY+ECS+KT+ ++ VF+ A + L Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDLRSDPQTVRELAKMKQEPVKPEQGRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAAL 179
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOA_CANFA (Transforming protein RhoA OS=Canis familiaris GN=RHOA PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.104e-45 Identity = 89/173 (51.45%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR+D+ + + P+ +G ++ IGA Y+ECS+KT+ V+ VF+ A R L Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPTEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOA_RAT (Transforming protein RhoA OS=Rattus norvegicus GN=Rhoa PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 9.278e-45 Identity = 89/173 (51.45%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR+D+ + + P+ +G ++ IGA Y+ECS+KT+ V+ VF+ A R L Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOA_PONAB (Transforming protein RhoA OS=Pongo abelii GN=RHOA PE=2 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 9.278e-45 Identity = 89/173 (51.45%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR+D+ + + P+ +G ++ IGA Y+ECS+KT+ V+ VF+ A R L Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 The following BLAST results are available for this feature:
BLAST of FC876912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876912 ID=FC876912; Name=FC876912; organism=Citrus clementina; type=EST; length=841bpback to top |