FC876912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOA_MOUSE (Transforming protein RhoA OS=Mus musculus GN=Rhoa PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 9.278e-45 Identity = 89/173 (51.45%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR+D+ + + P+ +G ++ IGA Y+ECS+KT+ V+ VF+ A R L Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOA_HUMAN (Transforming protein RhoA OS=Homo sapiens GN=RHOA PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 9.278e-45 Identity = 89/173 (51.45%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR+D+ + + P+ +G ++ IGA Y+ECS+KT+ V+ VF+ A R L Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOA_BOVIN (Transforming protein RhoA OS=Bos taurus GN=RHOA PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 9.278e-45 Identity = 89/173 (51.45%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR+D+ + + P+ +G ++ IGA Y+ECS+KT+ V+ VF+ A R L Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO1_DROME (Ras-like GTP-binding protein Rho1 OS=Drosophila melanogaster GN=Rho1 PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.583e-44 Identity = 89/173 (51.45%), Postives = 117/173 (67.63%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR+D D P+ +G + + I A AY+ECS+K+++ V+ VF+ A R L Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAAL 179
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO1_ASHGO (GTP-binding protein RHO1 OS=Ashbya gossypii GN=RHO1 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.583e-44 Identity = 94/173 (54.34%), Postives = 117/173 (67.63%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI + FP YVPTVFDN+ A+V V+G V L LWDTAGQEDY+RLRPLSY ++V ++ +S+ S ENV +KWI E+ ++ GVPIILVG K DLR+D Q + G P+S AQ +E+ IGA YIECS+KT V+ VF+AA R L Sbjct: 13 KLVIVGDGACGKTCLLIVFAKGKFPQVYVPTVFDNYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSIDLPDSLENVMEKWISEVLYFCQGVPIILVGCKADLRNDPQVIEQLRQQGQQPVSQAQAQEVADQIGAVEYIECSAKTGFGVREVFEAATRASL 185
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHO1_YEAST (GTP-binding protein RHO1 OS=Saccharomyces cerevisiae GN=RHO1 PE=1 SV=3) HSP 1 Score: 179.489 bits (454), Expect = 2.067e-44 Identity = 91/173 (52.60%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ FP YVPTVF+N+ A+V V+G V L LWDTAGQEDY+RLRPLSY ++V ++ FS+ S ENV +KWI E+ H+ GVPIILVG K+DLR+D Q + G P+++ +G+ + IGA Y ECS+KT V+ VF+AA R L Sbjct: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOC_PONAB (Rho-related GTP-binding protein RhoC OS=Pongo abelii GN=RHOC PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.604e-44 Identity = 88/173 (50.87%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR D+ + + P+ + +G ++ I A Y+ECS+KT++ V+ VF+ A R L Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAGL 179
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOC_MOUSE (Rho-related GTP-binding protein RhoC OS=Mus musculus GN=Rhoc PE=1 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 4.604e-44 Identity = 88/173 (50.87%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR D+ + + P+ + +G ++ I A Y+ECS+KT++ V+ VF+ A R L Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAGL 179
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOC_HUMAN (Rho-related GTP-binding protein RhoC OS=Homo sapiens GN=RHOC PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.604e-44 Identity = 88/173 (50.87%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR D+ + + P+ + +G ++ I A Y+ECS+KT++ V+ VF+ A R L Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAGL 179
BLAST of FC876912 vs. ExPASy Swiss-Prot
Match: RHOC_CHICK (Rho-related GTP-binding protein RhoC OS=Gallus gallus GN=RHOC PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.604e-44 Identity = 88/173 (50.87%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 198 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 710 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR+D+ + + P+ +G ++ I A Y+ECS+KT++ V+ VF+ A R L Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRINAFGYLECSAKTKEGVREVFEMATRAGL 179 The following BLAST results are available for this feature:
BLAST of FC876912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876912 ID=FC876912; Name=FC876912; organism=Citrus clementina; type=EST; length=841bpback to top |