FC876923

Overview
NameFC876923
Unique NameFC876923
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_VIBFM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio fischeri (strain MJ11) GN=gpmI PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.558e-16
Identity = 53/149 (35.57%), Postives = 81/149 (54.36%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ E+   AI S ++  +  N PN DMVGHTG  +ATV A ++ DE +  +++AI++V G  L+TADHGNAE M+     G          V T+HT  PVP+   G      ++F+     G L+++A T +       P++
Sbjct:  370 PEMSAPELTEKLVAAIKSGKYDAIVCNFPNCDMVGHTGVYDATVKAVESLDECIGKVVEAIKEVDGQLLITADHGNAEMMIDPETGG----------VHTAHTNLPVPLIYVG---SKAIEFK---EGGKLSDLAPTMLALTDTAIPAE 502          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_METBU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Methanococcoides burtonii (strain DSM 6242) GN=gpmI PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.558e-16
Identity = 55/149 (36.91%), Postives = 79/149 (53.02%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ E   + I S ++  + +NL N DMVGH+G +EA V A +  D+ V  II AI++VGG  +V ADHGNAE MV+          +   Q  T+HT  PV        +    + R +L  G L++VA T +   G E P +
Sbjct:  373 PEMSAYEVTEELIERIGSGKYDVIVLNLANMDMVGHSGIMEAAVKAVEVVDDCVGKIITAIKEVGGEAMVMADHGNAEKMVE-------FCNNTERQCYTAHTSNPVRC------IYVTQEKRVELQKGRLSDVAPTILKIMGIEKPPE 508          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_LAWIP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=gpmI PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.558e-16
Identity = 50/149 (33.56%), Postives = 83/149 (55.70%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M  +E+ +R   A  S++F  +  NL N DMVGHTG+I+A++ A +A D  V  I  A+ +  G +++TADHGN E+M+  +K G+P          T+H+  PVP+     G P ++K      +G L ++A T ++      P++
Sbjct:  368 PEMSVMEVTDRLLTAWNSKKFSLIVCNLANPDMVGHTGNIKASISALEAVDNCVGRIEKAVAEQHGCFILTADHGNVEEML--DKSGQP---------QTAHSCNPVPLIAIYDGKPLNLK-----ESGKLGDIAPTILSIWDVSIPNE 500          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_YERE8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gpmI PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.259e-16
Identity = 55/157 (35.03%), Postives = 83/157 (52.87%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M + E+ E+   AI S ++  +  N PN DMVGHTGD +A V A +  D  ++ ++ A++ V G  L+TADHGNAE M       +P       Q  T+HT  PVP+   G     +VK    +  G L+++A T ++    E P +   +P FI
Sbjct:  373 PEMSSAELTEKLVGAIASGKYDVIICNYPNGDMVGHTGDYDAAVKAVETLDNCIEQVVAAVQAVDGQLLITADHGNAEQM------RDP----ATGQAHTAHTSLPVPLIYVG---NKEVK---AVEGGKLSDIAPTMLSLMEMEIPQEMTGKPLFI 513          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SILST (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Silicibacter sp. (strain TM1040) GN=gpmI PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.259e-16
Identity = 53/150 (35.33%), Postives = 80/150 (53.33%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIA-IGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+  +  +AI +  +  +  N  N DMVGHTGD++A + AC+A D+ +  ++ A++  GG  +VTADHGN E MV     G            T+HT   VP+A +GGP         T L +G LA++A T +   G + P +
Sbjct:  367 PEMSAPEVTAKFVEAIRAG-YDLIVTNYANPDMVGHTGDLDAAIKACEAVDQGLGEVVAALKDAGGAMIVTADHGNCELMVDPETGG----------AHTAHTTNLVPVALVGGPE-------GTALKDGRLADLAPTLLALMGLDQPEE 498          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_BACLD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=gpmI PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.259e-16
Identity = 50/149 (33.56%), Postives = 79/149 (53.02%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ +   K I + + + + +N  N DMVGH+G +E TV A +A DE +  ++DAI   GG  ++TADHGNA+ ++     G+P          T+HT  PVP+ +   G+       T    G L ++A T ++  G E P +
Sbjct:  372 PEMSAYEVKDALVKEIEAEKHNAIILNFANPDMVGHSGKVEPTVKAIEAVDECLGEVVDAILAKGGYAIITADHGNADVLITEE--GKP---------HTAHTTNPVPVIVTKEGV-------TLREGGILGDLAPTLLDLLGVEKPKE 502          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_RHOS5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=gpmI PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.238e-15
Identity = 51/150 (34.00%), Postives = 75/150 (50.00%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A ++++   +AI    +  + VN  N DMVGHTGD+ A + AC+  D  +   ++A+ + GG  +VTADHGN E M+     G            T+HT  PVP I +GGP           L  G LA++A T +   G   P +
Sbjct:  366 PEMSAPDVSDHLVQAI-GEGYDLIVVNYANPDMVGHTGDLRAAMAACEEVDRGLGRAVEAVRQAGGAMIVTADHGNCETMIDPETGGPH----------TAHTTNPVPVILVGGPA-------GARLRAGRLADLAPTLLELMGLPQPEE 497          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_VIBF1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=gpmI PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.617e-15
Identity = 53/149 (35.57%), Postives = 80/149 (53.69%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ E+   AI S ++  +  N PN DMVGHTG  +A V A ++ DE +  +++AI++V G  L+TADHGNAE M+     G          V T+HT  PVP+   G      V+F+     G L+++A T +       P++
Sbjct:  370 PEMSAPELTEKLVAAIKSGKYDAIVCNFPNCDMVGHTGVYDAAVKAVESLDECIGKVVEAIKEVDGQLLITADHGNAEMMIDPETGG----------VHTAHTNLPVPLIYVG---SKAVEFK---EGGKLSDLAPTMLALTDTAIPAE 502          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_THICR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Thiomicrospira crunogena (strain XCL-2) GN=gpmI PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.617e-15
Identity = 59/151 (39.07%), Postives = 78/151 (51.66%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVP-IAIGGPGLPDDVKFRTDLPNGG-LANVAATFINFHGYEAPSD 735
            P+M   E+ E+   AI S  +     N+ N DMVGHTGD  A V A +A DEA+  I+  I+ V G  +VTADHGN E M+   + G+P         LTSHT  PVP +  G  G P        L +GG L +V  T ++  G E P +
Sbjct:  379 PEMSLPELKEKLIDAIKSGEYDTFICNIANPDMVGHTGDFNACVQAAEAVDEALGEILATIKAVDGEAIVTADHGNME-MLFNEETGKP---------LTSHTTFPVPFVYFGKKGYP--------LKDGGALCDVIPTLLDMMGIEKPEE 511          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SYNP2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=gpmI PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.617e-15
Identity = 59/155 (38.06%), Postives = 79/155 (50.97%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVP-IAIGGP-----GLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A  + + A +AI    +  V +N  N DMVGHTG +EA V A +  D  +  ++  I K+GG  L+TADHGNAE M            D N +  T+HT  PVP I I G      G   DV  R    NG LA+VA T ++  G + P +
Sbjct:  367 PEMSAKAVTDAACQAIEKGIYSLVVINYANPDMVGHTGKLEAAVQAIETVDHCLGRLVATIGKMGGTTLITADHGNAEYMA-----------DQNGKSWTAHTTNPVPFILIEGERRKVVGHGADVVLR---ENGCLADVAPTILDILGIDKPQE 507          
The following BLAST results are available for this feature:
BLAST of FC876923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 262
Match NameE-valueIdentityDescription
GPMI_VIBFM5.558e-1635.572,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_METBU5.558e-1636.912,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LAWIP5.558e-1633.562,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERE87.259e-1635.032,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SILST7.259e-1635.332,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACLD7.259e-1633.562,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_RHOS51.238e-1534.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBF11.617e-1535.572,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_THICR1.617e-1539.072,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNP21.617e-1538.062,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BG10RM1 EHR Citrus clementina cDNA clone KN0AAN3BG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876923 ID=FC876923; Name=FC876923; organism=Citrus clementina; type=EST; length=737bp
GCACGAGGGAGAGAACTAGTCTCAGTTTTTTTTTTTTTTTTTTTTTTTTT
CTAACAAAAATAAATTTTGAGCTATATTGTTCTGTCTGCCTCCAACAAAC
AGCAATCGAAATGTAAGCTGAAAAACAGCACGCGTATCAAAATGAATTCA
AAACCCCAAAATTCAATTTATTGTTTTACGTTTTAACGGAATTCCTCCGG
AGTTATAAAATCTAGGCGACGATCCATTGTTCGCCCAGTCGTCAGTTACT
TCTCAGTCGTCAGTTACTTCAATAAAACTTGGCTCGTAGTCACTAGGCGC
CTCATATCCATGGAAATTGATAAAAGTTGCTGCTACATTGGCCAGCCCAC
CATTAGGGAGATCTGTGCGGAACTTGACATCATCTGGCAGTCCAGGACCT
CCGATTGCAATGGGAACGGGTTTAAAAGTGTGAGACGTGAGCACTTGAAT
ATTGCCATCCTTAAAAAGAGGCTCCCCAAATTTGTTCCTCTTGACCATGT
CCTCAGCATTGCCATGATCTGCAGTAACAAGATATATTCCACCAACTTTC
TCTATTGCATCAATGATTATCTTGACAGCTTCATCAGCAGCCTTGCATGC
CACCACTGTTGCCTCAATATCTCCCGTGTGCCCCACCATGTCACTATTTG
GTAGGTTAACACGCACCTGGTGGAACCTGCGACTAAGGATGGCCTTCTTT
GCCCTTTCAGCAATCTCCAAAGCCTTCATCTTGGGCT
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