FC876923

Overview
NameFC876923
Unique NameFC876923
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_RHOPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Rhodopseudomonas palustris GN=gpmI PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.617e-15
Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ ++A  AI S ++  + +N  N DMVGHTG + A + A +  D  +  I+ AI K GG  LVTADHGN E M++  + G P          T+HT  PVP+ + G   P        L +G L+++A T +       P++
Sbjct:  366 PEMSAPELGDKAVAAIESGKYDLIVLNFANPDMVGHTGSLPAAIKAVETVDTQLGHIVAAIRKAGGALLVTADHGNCE-MMRDPETGGP---------HTAHTTNPVPVLLVGDNGP--------LADGQLSDLAPTLLKLMELPQPAE 496          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_MYCCT (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=gpmI PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.617e-15
Identity = 55/152 (36.18%), Postives = 80/152 (52.63%), Query Frame = -3
Query:  283 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDA-IEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDYE 735
            P+M A+EI ++  + I    F  + +N  N DMVGHTG+ +AT +ACK  D+ +K I D  + K  GI ++TADHGNAE M+           D + QV   HT   VPI I       ++K + + P   +A VA T ++    E P + E
Sbjct:  389 PQMSAVEITDKLLEEIKKDEFDFIVLNFANCDMVGHTGNNKATEIACKTLDDQLKRIHDEFVLKHNGIMVITADHGNAEIMI-----------DKDDQVNKKHTTSLVPIII----TDKNIKLKQNDP--AIAKVAPTILDLMNIEIPKEME 523          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_EHRRW (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ehrlichia ruminantium (strain Welgevonden) GN=gpmI PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.617e-15
Identity = 52/149 (34.90%), Postives = 75/149 (50.34%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A EI +   K I  +++  + +N  N+DMVGHTG+IEAT  A    D+ +  I+  I     I ++TADHGNAE+M          F   N    T+HT  PVP  +     P  +K    L NG L++VA T +     + P +
Sbjct:  358 PEMSAYEITDTLIKKINLQKYSLIIINYANADMVGHTGNIEATKKAITTLDQCLGKILKCIHNTNYILVITADHGNAEEM----------FDVQNNMPYTAHTLNPVPFVV--CNYPKKIK----LKNGRLSDVAPTILEILNIKQPEE 490          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_EHRRG (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ehrlichia ruminantium (strain Gardel) GN=gpmI PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.617e-15
Identity = 52/149 (34.90%), Postives = 75/149 (50.34%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A EI +   K I  +++  + +N  N+DMVGHTG+IEAT  A    D+ +  I+  I     I ++TADHGNAE+M          F   N    T+HT  PVP  +     P  +K    L NG L++VA T +     + P +
Sbjct:  358 PEMSAYEITDTLIKKINLQKYSLIIINYANADMVGHTGNIEATKKAITTLDQCLGKILKCIHNTNYILVITADHGNAEEM----------FDVQNNMPYTAHTLNPVPFVV--CNYPKKIK----LKNGRLSDVAPTILEILNIKQPEE 490          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_CYAP4 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=gpmI PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.617e-15
Identity = 56/155 (36.13%), Postives = 81/155 (52.26%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVP-IAIGG-----PGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P M A ++ +    A+    +  V VN  N DMVGHTG ++AT+ A +A D  V  ++ ++ ++GG  L+TADHGNAE MV  ++ G P          T+HT  PVP I + G     PG   DV  R D   G LA++A T +       P++
Sbjct:  367 PAMSAAQVTQEVIAAVEKGVYSMVVVNYANPDMVGHTGQMKATIQALEAVDRCVGQLLQSVLQMGGTLLITADHGNAECMV--DEQGNP---------WTAHTTNPVPFILVEGEGVKIPGHGTDVALRDD---GCLADIAPTILEILRLPQPAE 507          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_BACSU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus subtilis GN=gpmI PE=1 SV=4)

HSP 1 Score: 83.1889 bits (204), Expect = 1.617e-15
Identity = 50/149 (33.56%), Postives = 79/149 (53.02%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ +   K I + +   + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GG  ++TADHGNA+ ++  +  GEP          T+HT  PVP+ +   G+       T    G L ++A T ++  G E P +
Sbjct:  372 PEMSAYEVKDALVKEIEADKHDAIILNFANPDMVGHSGMVEPTIKAIEAVDECLGEVVDAILAKGGHAIITADHGNADILITES--GEP---------HTAHTTNPVPVIVTKEGI-------TLREGGILGDLAPTLLDLLGVEKPKE 502          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_BACA2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus amyloliquefaciens (strain FZB42) GN=gpmI PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.617e-15
Identity = 50/149 (33.56%), Postives = 79/149 (53.02%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ +   K I + +   + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GG  ++TADHGNA+ ++   + GEP          T+HT  PVP+ +   G+       T    G L ++A T ++  G E P +
Sbjct:  372 PEMSAYEVKDALVKEIAADKHDAIILNFANPDMVGHSGMVEPTIKAIEAVDECLGEVVDAIIAKGGHAIITADHGNADILI--TETGEP---------HTAHTTNPVPVIVTKEGV-------TLREGGILGDLAPTLLDLLGVEKPKE 502          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_CLONN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium novyi (strain NT) GN=gpmI PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 51/149 (34.23%), Postives = 75/149 (50.34%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ +   K I S  +  + +N  N DMVGHTG I+A V A +  DE +  ++D I +  G   +TADHGN E M+         +  GN   +T+HT   VP A     + +D K +     G LA++A T +   G E P +
Sbjct:  369 PEMSAYEVTDEVLKRIDSDEYDMIILNYANPDMVGHTGVIDAAVKAVETVDECLGKVMDKILEKNGALFITADHGNCEQMID--------YSTGN--PMTAHTTNLVPFAY----IANDAKEKELREEGILADIAPTMLQSMGLEVPKE 503          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_BACSK (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus clausii (strain KSM-K16) GN=gpmI PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 49/149 (32.89%), Postives = 82/149 (55.03%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ +   K I   +   + +N  N DMVGH+G +E TV A +A DE +  ++DA+ + GG  ++TADHGNA+++V  +  G+P         +T+HT   VP+ +   G+       T   +G LA++A T ++  G + P +
Sbjct:  372 PEMSAYEVTDALVKEIEGEKHDVIILNFANPDMVGHSGMLEPTVKAIEAVDECLGRVVDALLQKGGAAIITADHGNADEVVTLD--GKP---------MTAHTTNKVPVIVTEKGI-------TLREDGILADLAPTVLDLLGADKPKE 502          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_ACIBL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Acidobacteria bacterium (strain Ellin345) GN=gpmI PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 50/150 (33.33%), Postives = 74/150 (49.33%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDL-PNGGLANVAATFINFHGYEAPSD 735
            P+M A  IA+  + A+    F  + VN  N+DMVGH+G I  T+ A +  D  +  + + + K GG  L+TADHGNAE M+     G            T+HT  PVP       + +D K R  L P+G L +++ T +   G   P +
Sbjct:  389 PEMSANGIADVIEHAVEKGAFDVIVVNFANADMVGHSGKIPPTITAVETVDSCLGRVYNVVRKKGGAMLITADHGNAEQMIDPETGGPQ----------TAHTTNPVPFIF----VAEDAKKRFSLRPDGALQDISPTMMGILGIPQPKE 524          
The following BLAST results are available for this feature:
BLAST of FC876923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 262
Match NameE-valueIdentityDescription
GPMI_RHOPA1.617e-1534.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCCT1.617e-1536.182,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_EHRRW1.617e-1534.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_EHRRG1.617e-1534.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CYAP41.617e-1536.132,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACSU1.617e-1533.562,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACA21.617e-1533.562,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLONN2.112e-1534.232,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACSK2.112e-1532.892,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ACIBL2.112e-1533.332,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BG10RM1 EHR Citrus clementina cDNA clone KN0AAN3BG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876923 ID=FC876923; Name=FC876923; organism=Citrus clementina; type=EST; length=737bp
GCACGAGGGAGAGAACTAGTCTCAGTTTTTTTTTTTTTTTTTTTTTTTTT
CTAACAAAAATAAATTTTGAGCTATATTGTTCTGTCTGCCTCCAACAAAC
AGCAATCGAAATGTAAGCTGAAAAACAGCACGCGTATCAAAATGAATTCA
AAACCCCAAAATTCAATTTATTGTTTTACGTTTTAACGGAATTCCTCCGG
AGTTATAAAATCTAGGCGACGATCCATTGTTCGCCCAGTCGTCAGTTACT
TCTCAGTCGTCAGTTACTTCAATAAAACTTGGCTCGTAGTCACTAGGCGC
CTCATATCCATGGAAATTGATAAAAGTTGCTGCTACATTGGCCAGCCCAC
CATTAGGGAGATCTGTGCGGAACTTGACATCATCTGGCAGTCCAGGACCT
CCGATTGCAATGGGAACGGGTTTAAAAGTGTGAGACGTGAGCACTTGAAT
ATTGCCATCCTTAAAAAGAGGCTCCCCAAATTTGTTCCTCTTGACCATGT
CCTCAGCATTGCCATGATCTGCAGTAACAAGATATATTCCACCAACTTTC
TCTATTGCATCAATGATTATCTTGACAGCTTCATCAGCAGCCTTGCATGC
CACCACTGTTGCCTCAATATCTCCCGTGTGCCCCACCATGTCACTATTTG
GTAGGTTAACACGCACCTGGTGGAACCTGCGACTAAGGATGGCCTTCTTT
GCCCTTTCAGCAATCTCCAAAGCCTTCATCTTGGGCT
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