FC876923

Overview
NameFC876923
Unique NameFC876923
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_MYCMS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma mycoides subsp. mycoides SC GN=gpmI PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.758e-15
Identity = 55/152 (36.18%), Postives = 79/152 (51.97%), Query Frame = -3
Query:  283 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDA-IEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDYE 735
            P+M A+EI ++  + I    F  + +N  N DMVGHTG+ +AT +ACK  DE +K I +  + +  GI ++TADHGNAE M+          KDG  QV   HT   VPI I       D+  +    +  +A VA T ++    E P + E
Sbjct:  389 PQMSAVEITDKLLEEIKKDEFDFIVLNFANCDMVGHTGNNKATEIACKTLDEQLKRIHEEFVLRHNGIMVITADHGNAEIMID---------KDG--QVNKKHTTSLVPIII------TDLNIKLKQNDPEIAKVAPTILDLMNIEIPKEME 523          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_METFK (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gpmI PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.758e-15
Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = -3
Query:  391 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPG 735
            P+M A E+ +R + AILSR++  +  N  N DMVGH+GD+ A++ A +  D  +  I+ A+E +GG  ++TADHGN E M +  +  +P  +    QV      KP  +A  G G
Sbjct:  372 PEMSAYEVTDRLEAAILSRKYDAIICNYANCDMVGHSGDLSASIKAVETIDTCIARIVKAMESIGGQMIITADHGNVEQM-RDYENNQPHTQHTTNQVPLFFIGKPATLAAPGTG 485          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_YERPS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia pseudotuberculosis GN=gpmI PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15
Identity = 53/157 (33.76%), Postives = 80/157 (50.96%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M + E+ E+   AI S ++  +  N PN DMVGHTGD +A V A +  D  ++ ++ A++   G  L+TADHGNAE M       +P       Q  T+HT  PVP+   G       K    +  G L+++A T ++    E P +   +P FI
Sbjct:  373 PEMSSAELTEKLVSAIGSGKYDVIICNYPNGDMVGHTGDYDAAVKAVETLDNCIEQVVAAVKAADGQLLITADHGNAEQM------RDP----ATGQAHTAHTSLPVPLIYVGN------KAVKAVEGGKLSDIAPTMLSLMEMEIPQEMTGKPLFI 513          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_YERPP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia pestis (strain Pestoides F) GN=gpmI PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15
Identity = 53/157 (33.76%), Postives = 80/157 (50.96%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M + E+ E+   AI S ++  +  N PN DMVGHTGD +A V A +  D  ++ ++ A++   G  L+TADHGNAE M       +P       Q  T+HT  PVP+   G       K    +  G L+++A T ++    E P +   +P FI
Sbjct:  373 PEMSSAELTEKLVSAIGSGKYDVIICNYPNGDMVGHTGDYDAAVKAVETLDNCIEQVVAAVKAADGQLLITADHGNAEQM------RDP----ATGQAHTAHTSLPVPLIYVGN------KAVKAVEGGKLSDIAPTMLSLMEMEIPQEMTGKPLFI 513          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_YERPN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=gpmI PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15
Identity = 53/157 (33.76%), Postives = 80/157 (50.96%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M + E+ E+   AI S ++  +  N PN DMVGHTGD +A V A +  D  ++ ++ A++   G  L+TADHGNAE M       +P       Q  T+HT  PVP+   G       K    +  G L+++A T ++    E P +   +P FI
Sbjct:  373 PEMSSAELTEKLVSAIGSGKYDVIICNYPNGDMVGHTGDYDAAVKAVETLDNCIEQVVAAVKAADGQLLITADHGNAEQM------RDP----ATGQAHTAHTSLPVPLIYVGN------KAVKAVEGGKLSDIAPTMLSLMEMEIPQEMTGKPLFI 513          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_YERPE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia pestis GN=gpmI PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15
Identity = 53/157 (33.76%), Postives = 80/157 (50.96%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M + E+ E+   AI S ++  +  N PN DMVGHTGD +A V A +  D  ++ ++ A++   G  L+TADHGNAE M       +P       Q  T+HT  PVP+   G       K    +  G L+++A T ++    E P +   +P FI
Sbjct:  373 PEMSSAELTEKLVSAIGSGKYDVIICNYPNGDMVGHTGDYDAAVKAVETLDNCIEQVVAAVKAADGQLLITADHGNAEQM------RDP----ATGQAHTAHTSLPVPLIYVGN------KAVKAVEGGKLSDIAPTMLSLMEMEIPQEMTGKPLFI 513          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_YERPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=gpmI PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15
Identity = 53/157 (33.76%), Postives = 80/157 (50.96%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M + E+ E+   AI S ++  +  N PN DMVGHTGD +A V A +  D  ++ ++ A++   G  L+TADHGNAE M       +P       Q  T+HT  PVP+   G       K    +  G L+++A T ++    E P +   +P FI
Sbjct:  373 PEMSSAELTEKLVSAIGSGKYDVIICNYPNGDMVGHTGDYDAAVKAVETLDNCIEQVVAAVKAADGQLLITADHGNAEQM------RDP----ATGQAHTAHTSLPVPLIYVGN------KAVKAVEGGKLSDIAPTMLSLMEMEIPQEMTGKPLFI 513          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_YERP3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=gpmI PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15
Identity = 53/157 (33.76%), Postives = 80/157 (50.96%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M + E+ E+   AI S ++  +  N PN DMVGHTGD +A V A +  D  ++ ++ A++   G  L+TADHGNAE M       +P       Q  T+HT  PVP+   G       K    +  G L+++A T ++    E P +   +P FI
Sbjct:  373 PEMSSAELTEKLVSAIGSGKYDVIICNYPNGDMVGHTGDYDAAVKAVETLDNCIEQVVAAVKAADGQLLITADHGNAEQM------RDP----ATGQAHTAHTSLPVPLIYVGN------KAVKAVEGGKLSDIAPTMLSLMEMEIPQEMTGKPLFI 513          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_VESOH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=gpmI PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15
Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ +   + I S+++  +  N  N+DMVGH+G ++AT+ A +A D  + II  A+  +GG  L+TADHGNAE M+               +V T+HT  PVP+        D +K       G L+++A T +     E P +
Sbjct:  368 PEMSAFELTDALVENIESQKYDLIICNFANTDMVGHSGKLDATIKAVEAVDTCLGIIYKAMFAIGGEMLITADHGNAEQMINPQ----------TNEVHTAHTNNPVPLIFVSNRKADIMK----PGKGALSDIAPTLLAMMDIEKPDE 502          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SYNPX (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. (strain WH8102) GN=gpmI PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15
Identity = 53/154 (34.42%), Postives = 77/154 (50.00%), Query Frame = -3
Query:  292 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVP-IAIGG-----PGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPS 735
            P M A ++ +    AI    +  + +N  N DMVGHTG ++A   A    D  +  ++DA+ + GG  L+TADHGNAE           L +  + Q  T+HT  PVP I + G     PG  +D+  R D   GGLA++A T +     E P+
Sbjct:  377 PAMSADQLTDSCIDAIDQGTYSLIVINYANPDMVGHTGVMDAATEAIATVDRCIGRLLDAVGRRGGTMLITADHGNAE-----------LMQGPDGQAWTAHTTNPVPCILVEGEQRKLPGHGNDISLRED---GGLADIAPTLLQILNLEQPA 516          
The following BLAST results are available for this feature:
BLAST of FC876923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 262
Match NameE-valueIdentityDescription
GPMI_MYCMS2.758e-1536.182,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_METFK2.758e-1537.392,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERPS3.602e-1533.762,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERPP3.602e-1533.762,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERPN3.602e-1533.762,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERPE3.602e-1533.762,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERPA3.602e-1533.762,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERP33.602e-1533.762,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VESOH3.602e-1532.892,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNPX3.602e-1534.422,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BG10RM1 EHR Citrus clementina cDNA clone KN0AAN3BG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876923 ID=FC876923; Name=FC876923; organism=Citrus clementina; type=EST; length=737bp
GCACGAGGGAGAGAACTAGTCTCAGTTTTTTTTTTTTTTTTTTTTTTTTT
CTAACAAAAATAAATTTTGAGCTATATTGTTCTGTCTGCCTCCAACAAAC
AGCAATCGAAATGTAAGCTGAAAAACAGCACGCGTATCAAAATGAATTCA
AAACCCCAAAATTCAATTTATTGTTTTACGTTTTAACGGAATTCCTCCGG
AGTTATAAAATCTAGGCGACGATCCATTGTTCGCCCAGTCGTCAGTTACT
TCTCAGTCGTCAGTTACTTCAATAAAACTTGGCTCGTAGTCACTAGGCGC
CTCATATCCATGGAAATTGATAAAAGTTGCTGCTACATTGGCCAGCCCAC
CATTAGGGAGATCTGTGCGGAACTTGACATCATCTGGCAGTCCAGGACCT
CCGATTGCAATGGGAACGGGTTTAAAAGTGTGAGACGTGAGCACTTGAAT
ATTGCCATCCTTAAAAAGAGGCTCCCCAAATTTGTTCCTCTTGACCATGT
CCTCAGCATTGCCATGATCTGCAGTAACAAGATATATTCCACCAACTTTC
TCTATTGCATCAATGATTATCTTGACAGCTTCATCAGCAGCCTTGCATGC
CACCACTGTTGCCTCAATATCTCCCGTGTGCCCCACCATGTCACTATTTG
GTAGGTTAACACGCACCTGGTGGAACCTGCGACTAAGGATGGCCTTCTTT
GCCCTTTCAGCAATCTCCAAAGCCTTCATCTTGGGCT
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