FC876923

Overview
NameFC876923
Unique NameFC876923
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_AERS4 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Aeromonas salmonicida (strain A449) GN=gpmI PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.910e-16
Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M + E+ ++   AI S ++  +  N PN DMVGHTG  +A V AC+A D  V  + +A+ +VGG  L+TADHGNAE M+           +   Q  T+HT  PVP+   G       +    L  G L+++A T +   G   P +
Sbjct:  368 PEMSSEELTDKLVAAIKSGKYDTIICNYPNGDMVGHTGVFDAAVKACEAVDHCVGRVTEALAEVGGECLITADHGNAEKML----------DEETGQAHTAHTNLPVPLIYFG-------RKAEVLEGGKLSDLAPTMLTLMGLPVPPE 499          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SYMTH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Symbiobacterium thermophilum GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.495e-16
Identity = 56/147 (38.10%), Postives = 74/147 (50.34%), Query Frame = -3
Query:  295 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAP 735
            P+M A E+A  A K I   R   + +N  N DMVGHTG +EA + A +A DE +  ++DA+   GG  ++ ADHGN + MV   + G P          T+HT  PVP       L DD +    L  G LANVA T +   G   P
Sbjct:  370 PEMSAYEVAREAVKWIEEDRTDFIVLNFANPDMVGHTGVLEAAIRAVEAVDECLGQVVDALLAKGGAAVIIADHGNCDQMVD-YETGAP---------HTNHTLNPVPCI-----LVDDQRLDAKLKPGVLANVAPTLLEIIGLPKP 501          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_PSEMY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas mendocina (strain ymp) GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.495e-16
Identity = 57/150 (38.00%), Postives = 77/150 (51.33%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINFHGYEAPSD 735
            P+M A E+ +R   AI ++R+  + VN  N DMVGHTG  EA V A +  D  V  I +A++KVGG  L+TADHGN E M            +   Q  T+HT +PVP    G       K    +  GG LA+VA T +   G   P++
Sbjct:  368 PEMSAPEVTDRIVDAIENQRYDVIIVNYANGDMVGHTGVFEAAVKAVETLDTCVGRITEALQKVGGEALITADHGNVEQME----------DECTGQAHTAHTCEPVPFIYVG-------KRPARIREGGVLADVAPTLLTLMGLPQPAE 500          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_LEGPC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Legionella pneumophila (strain Corby) GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.495e-16
Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ +    AI SR +H +  N  N+DMVGHTG+ EATV A +  D+ +  +  A++  GG  L+TADHGNAE+M          F +   Q  T+HT +PVP    G G      +      G L ++A + +   G   P +
Sbjct:  368 PEMSAPELTKTLIAAINSRDYHVIICNYANADMVGHTGNFEATVQAIECLDQCMHQVWQALKNNGGKLLITADHGNAEEM----------FSEATNQAHTAHTSEPVPFLYVGGG------WHFTHAEGSLIDIAPSLLALLGITPPPE 500          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_ENTS8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.495e-16
Identity = 56/157 (35.67%), Postives = 79/157 (50.32%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M + E+ E+   AI S ++  +  N PN DMVGHTG  +A V A +A D  +  +  A+E  GG  L+TADHGNAE M       +P       Q  T+HT  PVP+   G       K    +  G L+++A T +   G E P +   +P FI
Sbjct:  373 PEMSSAELTEKLVGAINSGKYDAIICNYPNGDMVGHTGVFDAAVAAVEALDNCIAQVTRAVEAAGGQMLITADHGNAEQM------RDP----ATGQAHTAHTNLPVPLIYVGD------KAVKAVDGGKLSDIAPTLLTLMGMEIPQEMTGKPLFI 513          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_AKKM8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.495e-16
Identity = 55/149 (36.91%), Postives = 85/149 (57.05%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+A++   A+   ++  V +N  N DMVGHTG +EA + AC+A D A++  +  + ++GG  L+TADHGNAE M  RN+ G P          T+HT   V +      + DD K +  L +G LA+VA T ++  G + P++
Sbjct:  373 PQMSAAEVADKFVDAV--NKYDVVIMNFANGDMVGHTGFVEAGIAACEAVDSALEKCVKKVLELGGKLLITADHGNAEHM--RNEDGSP---------NTAHTTNLVDLIY----VADD-KDQVTLSDGILADVAPTLLSLMGLKQPAE 503          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SERP5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Serratia proteamaculans (strain 568) GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.255e-16
Identity = 56/158 (35.44%), Postives = 82/158 (51.90%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M A E+ ++   AI S ++  +  N PN DMVGHTG  +A V A +  D  +  +++A++ V G  L+TADHGNAE M       +P       Q  T+HT  PVP I IG P         + +  G L+++A T +   G E P +   +P FI
Sbjct:  373 PEMSAAELTDKLLAAIASGKYDAIICNYPNGDMVGHTGVYDAAVKAVETLDNCIAQVVEAVKAVDGQLLITADHGNAEQM------RDP----ATGQAHTAHTSLPVPLIYIGKPA--------SAVNGGKLSDIAPTMLALMGMEIPQEMTGKPLFI 512          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_PSEHT (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.255e-16
Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M +  + ++   AI S ++  +  N PN DMVGH+G   A V AC+A D  +  ++ A+ K GG  L+TADHGNAE M           K G  Q  T+HT +PVP    G       +  T      L++VA T ++  G E P++
Sbjct:  373 PEMNSEMLTDKLVAAIKSGKYDAIICNYPNGDMVGHSGVFAAAVKACEAVDHCIGRVVAALNKYGGEALITADHGNAEQMAN--------LKTG--QAHTAHTSEPVPFIYVG-------RDATASEGKALSDVAPTMLHLMGMEQPTE 504          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_LEGPL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Legionella pneumophila (strain Lens) GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.255e-16
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ +    AI S+ +H +  N  N+DMVGHTG+ EATV A +  D+ ++ +  A++  GG  L+TADHGNAE+M          F +   Q  T+HT +PVP    G G      +      G L ++A + +   G   P +
Sbjct:  368 PEMSAHELTKTLIAAINSQDYHVIICNYANADMVGHTGNFEATVQAIECLDQCMQQVWQALKNNGGKLLITADHGNAEEM----------FSEATNQAHTAHTSEPVPFLYVGGG------WHFTHSEGSLIDIAPSLLALLGITPPPE 500          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_LEGPH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.255e-16
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ +    AI S+ +H +  N  N+DMVGHTG+ EATV A +  D+ ++ +  A++  GG  L+TADHGNAE+M          F +   Q  T+HT +PVP    G G      +      G L ++A + +   G   P +
Sbjct:  368 PEMSAHELTKTLIAAINSQDYHVIICNYANADMVGHTGNFEATVQAIECLDQCMQQVWQALKNNGGKLLITADHGNAEEM----------FSEATNQAHTAHTSEPVPFLYVGGG------WHFTHSEGSLIDIAPSLLALLGITPPPE 500          
The following BLAST results are available for this feature:
BLAST of FC876923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 262
Match NameE-valueIdentityDescription
GPMI_AERS41.910e-1634.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYMTH2.495e-1638.102,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEMY2.495e-1638.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEGPC2.495e-1634.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ENTS82.495e-1635.672,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_AKKM82.495e-1636.912,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SERP54.255e-1635.442,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEHT4.255e-1634.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEGPL4.255e-1634.232,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEGPH4.255e-1634.232,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BG10RM1 EHR Citrus clementina cDNA clone KN0AAN3BG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876923 ID=FC876923; Name=FC876923; organism=Citrus clementina; type=EST; length=737bp
GCACGAGGGAGAGAACTAGTCTCAGTTTTTTTTTTTTTTTTTTTTTTTTT
CTAACAAAAATAAATTTTGAGCTATATTGTTCTGTCTGCCTCCAACAAAC
AGCAATCGAAATGTAAGCTGAAAAACAGCACGCGTATCAAAATGAATTCA
AAACCCCAAAATTCAATTTATTGTTTTACGTTTTAACGGAATTCCTCCGG
AGTTATAAAATCTAGGCGACGATCCATTGTTCGCCCAGTCGTCAGTTACT
TCTCAGTCGTCAGTTACTTCAATAAAACTTGGCTCGTAGTCACTAGGCGC
CTCATATCCATGGAAATTGATAAAAGTTGCTGCTACATTGGCCAGCCCAC
CATTAGGGAGATCTGTGCGGAACTTGACATCATCTGGCAGTCCAGGACCT
CCGATTGCAATGGGAACGGGTTTAAAAGTGTGAGACGTGAGCACTTGAAT
ATTGCCATCCTTAAAAAGAGGCTCCCCAAATTTGTTCCTCTTGACCATGT
CCTCAGCATTGCCATGATCTGCAGTAACAAGATATATTCCACCAACTTTC
TCTATTGCATCAATGATTATCTTGACAGCTTCATCAGCAGCCTTGCATGC
CACCACTGTTGCCTCAATATCTCCCGTGTGCCCCACCATGTCACTATTTG
GTAGGTTAACACGCACCTGGTGGAACCTGCGACTAAGGATGGCCTTCTTT
GCCCTTTCAGCAATCTCCAAAGCCTTCATCTTGGGCT
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