FC876929

Overview
NameFC876929
Unique NameFC876929
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 55/152 (36.18%), Postives = 76/152 (50.00%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVI----------SAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGD 699
            F ++DGHGG  AAE+ ++ L  N+I          SA    +  TD  LL+   S     G+TA    ++G  + VAN+GD++AV+ R                  AI V+R+HK     ER RI+ +GG V   G  R+ G L VSRAFGD
Sbjct:   96 FGVFDGHGGARAAEFVKQNLFTNLIKHPKLFSDTKSAIAETYTSTDSELLKAETSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGG---------------DAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD 232          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVI----------SAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGD 699
            F ++DGHGG  AAEY ++ L +N+I          +A    + +TD   L+   S     G+TA    ++G  + VAN+GD++AV+ R     G N          AI V+R+HK     ER RI+ +GG V   G  R+ G L VSRAFGD
Sbjct:   65 FGVFDGHGGARAAEYVKQNLFSNLIRHPKFISDTTAAIADAYNQTDSEFLKSENSQNRDAGSTASTAILVGDRLLVANVGDSRAVICR-----GGN----------AIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD 201          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 56/152 (36.84%), Postives = 76/152 (50.00%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVI----------SAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGD 699
            F ++DGHGG  AAEY ++ L +N+I          SA    +  TD   L+   S     G+TA    ++G  + VAN+GD++AVV R                  AI V+R+HK     ER RI+ +GG V   G  R+ G L VSRAFGD
Sbjct:  114 FGVFDGHGGARAAEYVKQHLFSNLIKHPKFISDIKSAIAETYNHTDSEFLKAESSHTRDAGSTASTAILVGDRLLVANVGDSRAVVCRGG---------------DAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD 250          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14
Identity = 51/152 (33.55%), Postives = 78/152 (51.32%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVIS----------AGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGD 699
            F I+DGHGG  AAEY ++ L  N++           A    ++KTD   L         DG+TA    ++G  ++VAN+GD++AV++++                KAI ++ +HK     ER RI+ +GG V   G  R+ G L +SRAFG+
Sbjct:  261 FGIFDGHGGSRAAEYLKEHLFENLMKHPEFMTNTKLAISETYKKTDSEFLDSESHTHRDDGSTASTAVLVGNHLYVANVGDSRAVISKAG---------------KAIALSEDHKPNRSDERKRIESAGGVVMWAGTWRVGGVLAMSRAFGN 397          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C22_ARATH (Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.805e-14
Identity = 52/153 (33.99%), Postives = 80/153 (52.29%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYA----------QKRLHANVISAGLPRFRKTDESLLQE-SVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGD 699
            A + ++DGHGG+ AAE+A           +   + +       F +TD + L+  S+ G    G TA+   + GR++ VAN GD +AV++R                 KAI ++R+HK +  +ER RI+ SGG V  +G L G+L V+RA GD
Sbjct:  127 AFYGVFDGHGGKHAAEFACHHIPRYIVEDQEFPSEINKVLSSAFLQTDTAFLEACSLDGSLASGTTALAAILFGRSLVVANAGDCRAVLSRQG---------------KAIEMSRDHKPMSSKERRRIEASGGHV-FDGYLNGQLNVARALGD 263          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14
Identity = 49/152 (32.24%), Postives = 80/152 (52.63%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVIS----------AGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVSRAFGD 699
            F ++DGHGG  AAEY ++ L  N++           A    ++KTD   L+   +    DG+TA    ++G  ++VAN+GD++AVV+++                KA+ ++ +HK     ER RI+ +GG V  +   R+ G L +SRAFG+
Sbjct:  143 FGVFDGHGGPRAAEYLKENLFENLLKHPEFLTDTKLAISETYQKTDTDFLESESNAFRDDGSTASTAVLVGGHLYVANVGDSRAVVSKAG---------------KAMALSEDHKPNRSDERKRIENAGGVVIWAGTWRVGGVLAMSRAFGN 279          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 50/154 (32.47%), Postives = 77/154 (50.00%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRLHANVIS----------AGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVSRAFGD 699
            A F ++DGHGG   AEY +  L  N++S          A +  F++TDE  L E        G+TA   +++G  + VAN+GD++ V +R+                 A+ ++ +HK     ER RI+ +GG +  +   R+ G L VSRAFGD
Sbjct:  153 AFFGVFDGHGGARTAEYLKNNLFKNLVSHDDFISDTKKAIVEVFKQTDEEYLIEEAGQPKNAGSTAATAFLIGDKLIVANVGDSRVVASRNG---------------SAVPLSDDHKPDRSDERQRIEDAGGFIIWAGTWRVGGILAVSRAFGD 291          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13
Identity = 56/154 (36.36%), Postives = 81/154 (52.60%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVISAGLPRF------------RKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGD 699
            F ++DGHGG   AEY ++ L ++++    P+F            + TD   L ES S   Q G+TA    ++G  +FVAN+GD++A++ R     G N          AI V+++HK     ER RI+ +GG V   G  R+ G L VSRAFGD
Sbjct:   59 FGVFDGHGGAKVAEYVKQNLFSHLLRH--PKFISDTKVAIDDAYKSTDSEFL-ESDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICR-----GGN----------AIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD 194          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C56_ORYSJ (Probable protein phosphatase 2C 56 OS=Oryza sativa subsp. japonica GN=Os06g0526800/Os06g0526950 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13
Identity = 49/153 (32.03%), Postives = 79/153 (51.63%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVIS----------AGLPRFRKTDESLLQESVSGGWQ-DGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVSRAFGD 699
            F ++DGHGG LAAEY ++ L  N+++          A    F KTD   L+   S  ++ DG+TAV   ++G  ++V N+GD++ V  ++                KA+ ++ +HK     E+ RI+ +GG V      R+ G L +SRAFG+
Sbjct:  128 FGVFDGHGGSLAAEYLKEHLFENLVNHPELLRDTKLAISQTFLKTDADFLESVSSNPFRDDGSTAVTAILVGNHLYVGNVGDSRVVALKAG---------------KAVPLSEDHKPNRKDEQKRIEDAGGIVVFDDTWRVNGLLAMSRAFGN 265          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C74_ORYSJ (Probable protein phosphatase 2C 74 OS=Oryza sativa subsp. japonica GN=Os11g0242200 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 66/233 (28.33%), Postives = 100/233 (42.92%), Query Frame = 1
Query:   76 IAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADA---AEDKGSRHTMEXXXXXXXXXXXXXPPNLRCAHFAIYDGHGGRLAAEYAQKRLHANVISAG------------------LPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVS--SNG--RLQGRLEVSRAFGD 699
            +A  + ++   E EEE A           +E+E +    A  +G RH ME               + + A + +YDGHGGR A ++   RL  NV++A                       R    +   E +S G + GA A    ++   ++VAN+GD +AV++R                  A  +T +H      ER+RI+ SGG VS  SNG  R+Q  L V+R+FGD
Sbjct:  109 MAAAAAVKAAKEKEEEEA-----------MEVEGEGFWVASRRGLRHAMEDGYGVITHKIEG---HSQMAFYGVYDGHGGRAAVDFVAGRLGNNVVAAAEKQRLSEKASSPAAADHVAAAIRAAYLATDSEFLSQGTRGGACAATALVIDGDLYVANLGDCRAVISRHG---------------AAAALTSDHTPARDDERSRIESSGGYVSCGSNGVWRVQDCLAVTRSFGD 312          
The following BLAST results are available for this feature:
BLAST of FC876929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
P2C59_ORYSJ3.314e-1536.18Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]
P2C59_ARATH3.314e-1536.84Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C10_ORYSJ5.652e-1536.84Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]
P2C52_ORYSJ2.148e-1433.55Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C22_ARATH2.805e-1433.99Probable protein phosphatase 2C 22 OS=Arabidopsis ... [more]
P2C13_ORYSJ4.785e-1432.24Probable protein phosphatase 2C 13 OS=Oryza sativa... [more]
P2C11_ARATH6.249e-1432.47Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]
P2C45_ORYSJ1.066e-1336.36Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C56_ORYSJ2.375e-1332.03Probable protein phosphatase 2C 56 OS=Oryza sativa... [more]
P2C74_ORYSJ3.102e-1328.33Probable protein phosphatase 2C 74 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BH06RM1 EHR Citrus clementina cDNA clone KN0AAN3BH06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876929 ID=FC876929; Name=FC876929; organism=Citrus clementina; type=EST; length=701bp
GCACGAGGTGAAAGCGAGACTCAGGAGCAGCAGCAGAAGCCGAAACGTGA
AGGTGACTTCGATGACTTCAATTTGATCGCCAAAAAATCCAAAATCGAAA
AAGTTAACGAAAATGAAGAAGAAGCAGCACGTGCACAAATTATGCACAAG
CAAATTGATTTTGTTGAAATCGAGGCCGATGCCGCCGAAGATAAGGGCTC
TAGACACACCATGGAAGATGCTTCGGTTGTCTTGGTCGATGCCTCCTCTG
ATTCTCCTCCGAATTTGAGGTGTGCGCATTTTGCAATATACGACGGACAT
GGAGGTCGTTTAGCAGCTGAGTATGCTCAGAAGCGTCTACATGCTAATGT
TATTTCAGCTGGCTTACCACGTTTTCGGAAAACGGATGAATCTCTTCTTC
AAGAAAGTGTTTCAGGAGGATGGCAGGACGGTGCTACAGCTGTATGTATT
TGGATACTAGGACGAACTGTTTTCGTTGCTAATATTGGGGATGCAAAAGC
AGTGGTTGCTAGATCATCTATTGTTGATGGATCTAATAATCATCTGGATG
AATTAAGTTCATTGAAGGCCATTGTGGTGACAAGGGAACACAAAGCCATC
TATCCGCAGGAACGGGCTCGTATTCAGAAGTCTGGTGGTACTGTCAGTTC
AAATGGAAGATTACAAGGACGCCTTGAAGTTTCTAGGGCATTTGGAGATC
G
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