FC876930
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_SCHPO (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trm61 OS=Schizosaccharomyces pombe GN=cpd1 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.450e-34 Identity = 81/217 (37.33%), Postives = 114/217 (52.53%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSN-KGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFER----TGVSSFVTVGVRDIQGQGFPDEFSGLADSIFLDLPQPWLAIPSAKKMLKQDGI--LCSFSPCIEQVQRSCES 777 ++ GDL + + + + + + F N++GAF HS+ IGK +G + S K GF+YLL PTPELWTL L HRTQI+Y DI+ + L + G V +R V P G ++TF++H R +A ++F V + RD+ GF D D+IFLDLP PW AIP + D +C FSPCIEQ+Q S E+ Sbjct: 10 VENGDLAVAWIGRNKLIPLHIEAEKTFHNQYGAFPHSEMIGKRYGEQIASTAKQGFIYLLQPTPELWTLALPHRTQIVYTPDIALIHQKLRITYGTRVIEAGTGSASMSHAISRTVGPLGRLFTFEYHATRYQTALQEFREHEMLIDVGGNTHLTHRDVCKDGFLDT-EVKVDAIFLDLPAPWEAIPHLSNHVNHDKSTRICCFSPCIEQIQHSAEA 225
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_ASHGO (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Ashbya gossypii GN=TRM61 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.450e-34 Identity = 86/234 (36.75%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGV--SSFVTVGVRDIQGQGF---------------PDEFSGLADSIFLDLPQPWLAIPSAKKMLKQD--GILCSFSPCIEQVQRSCES 777 I EGDLV+V+ +K +++ F R+G+F H D +G+P+GS + SN+ GF+++L PTPELWTL L HRTQI+Y D S+++ L P V AR V G +++++FH R A +F+ G+ VT+ RD+ +GF D S AD IFLDLP PW AIP ++ +D LC FSPCIEQV ++ E+ Sbjct: 11 IAEGDLVLVWISRGNVKQLRIKSGEVFNTRYGSFAHDDIVGRPYGSQIGVRTKGSNRFGFIHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLGCSPQSRVIEAGTGSGSFSHAFARTV---GQLFSYEFHHMRYEQALAEFQEHGLIADGNVTITHRDVCQKGFLIKAGDTTSYEFLEGQDSVSVNADCIFLDLPAPWEAIPHLDAVIAKDRTARLCCFSPCIEQVDKTLEA 241
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_CANGA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Candida glabrata GN=TRM61 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.211e-33 Identity = 85/232 (36.64%), Postives = 120/232 (51.72%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMV-----FSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGV-RDIQGQGF---------------PDEFSGLADSIFLDLPQPWLAIPSAKKMLKQDGI--LCSFSPCIEQVQRSCE 774 I+EGDL +++ D +K V + N F R+G+F H D IGKP+GS + + K FV+++ P+PELWTL L HRTQI+Y D S+++ L P V AR+V G +Y+++FH R A E+F+ G+ T+ RD+ GF ++ AD IFLDLP PW AIP ++ D LC FSPCIEQV ++ E Sbjct: 12 IQEGDLALIWISRDNIKPVTINANETFNTRYGSFPHKDMIGKPYGSQIAIRTKVAKKFAFVHVMQPSPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPNSRVIEAGTGSGSFSHAFARSV---GQLYSYEFHPVRYEQATEEFKEHGLLDKNTIITHRDVCKDGFTIKKTDETSYQFKADEEQLQIKADVIFLDLPAPWEAIPHIDSVIDNDEKVGLCCFSPCIEQVDKTLE 240
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_YARLI (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Yarrowia lipolytica GN=TRM61 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.081e-32 Identity = 79/216 (36.57%), Postives = 125/216 (57.87%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSA-FQNRFGAFKHS--DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGFPDEFSGL-ADSIFLDLPQPWLAIPSAKKMLKQDGI--LCSFSPCIEQVQRSCES 777 I++GDLV+ + +K + V + F R+GAF H D G GSM +K GF++L+ PTPELWTL L HRTQI+Y D S+++ L++ PG V +R+ G VY+++FHE+R A+++FER +++ + RD+ GF E + A ++FLDLP PW AIP ++++ + + +C FSPC EQV ++ ++ Sbjct: 9 IEDGDLVLGWMTRTAIKPIVVEKKEGLFNTRYGAFPHRNMDKYGAQLGSM---SKQGFIHLIHPTPELWTLSLPHRTQIVYTTDSSYIVQRLKIRPGSTVIESGTGSGSFTHAISRSAGLAGKVYSYEFHEERYNLAKQEFERHQLTNVIPTH-RDVCNDGFDIENIDVNATAVFLDLPAPWTAIPHLERVIDRSVVSRVCCFSPCFEQVVKAVQA 220
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_ASPFU (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trm61 OS=Aspergillus fumigatus GN=trm61 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.711e-23 Identity = 91/284 (32.04%), Postives = 127/284 (44.72%), Query Frame = 1 Query: 157 GDLVIVYERHD----CMKAVKVCQNSAFQN------RFGAFKHSDWIGKPFGSMVF----------------------------SNK--------------GGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAV-------APT------GHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGF--PDEFSG---LADSIFLDLPQPWLAI-------PS-AKKMLKQDG--ILCSFSPCIEQVQRS 768 GDL +++ R D + ++ +N ++ RFG+F HS I +P+GS + SNK GF++LL PTPELWT L HRTQ++Y D S+++ L + PG + RAV AP G V +F+FH QRA RE+ G+ + V V RD+ GF D +G A++IFLDLP PWLA+ PS A+ L +C+FSPCIEQVQR+ Sbjct: 15 GDLALLHLRRDQTIPTILKLEDDENQGYKEGKVTNTRFGSFPHSTLIDQPWGSQIVASVVDTGSRGRKNQSSKKRKADDLDTPTSNKDEAQSSPGTPRAAASGFLHLLYPTPELWTASLPHRTQVVYTPDYSYILHRLCVRPGSTIIEAGAGSGSFTHASVRAVFNGYPSEAPAAKKRRLGKVCSFEFHAQRAQRIREEIHDHGLDALVEVTHRDVYEDGFLLGDPKTGKSPKANAIFLDLPAPWLALKHLVRRPPSGAESPLDPSSPVYICTFSPCIEQVQRT 298
BLAST of FC876930 vs. ExPASy Swiss-Prot
Match: TRM61_ASPOR (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trm61 OS=Aspergillus oryzae GN=trm61 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.653e-21 Identity = 76/244 (31.15%), Postives = 105/244 (43.03%), Query Frame = 1 Query: 235 RFGAFKHSDWIGKPFGSMVFSNK--------------------------------------GGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAV--------APT-----GHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGF--PDEFSG---LADSIFLDLPQPWLAIPSAKKMLKQDG----------ILCSFSPCIEQVQRS 768 RFG+F H +P+GS + ++K GF++LL PTPELWT L HRTQ++Y D S+++ L PG V RAV PT G V +F+FH QRA R + + G+ V V RD+ GF D +G A++IFLDLP PWLA+ + + +C+FSPC+EQVQR+ Sbjct: 51 RFGSFPHITLCDQPWGSQIIASKVDTGSRGRTQKMKRKADELDSSTQAEDKPSPQTPVAASSGFLHLLYPTPELWTASLPHRTQVVYTPDYSYILHRLRARPGSTVIEAGAGSGSFTHASVRAVFNGYPSDDQPTKKRRLGKVCSFEFHAQRAEKVRVEVNQHGLDGLVEVTHRDVYEDGFLLGDPKTGKSPKANAIFLDLPAPWLALKHLVRNPPEGTESPLDPTSPVYICTFSPCLEQVQRT 294 The following BLAST results are available for this feature:
BLAST of FC876930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876930 ID=FC876930; Name=FC876930; organism=Citrus clementina; type=EST; length=777bpback to top |