FC876942

Overview
NameFC876942
Unique NameFC876942
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_ALHEH (Guanylate kinase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=gmk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11
Identity = 40/109 (36.70%), Postives = 59/109 (54.13%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKL 331
            V GN YGTS  AV+A+ D G+  IL+ID  GAR VR      + +FI PPS EEL  RL   G +  + I +++  A  E+        +D++L ND  +    +L+ +
Sbjct:   74 VFGNHYGTSRSAVQALLDQGQDVILEIDWQGARQVRERMPGCLSVFILPPSREELRRRLTQRGQDEPEVIDRRMAEAVSEM---SHYAEYDYLLVNDDFDRTLADLQAI 179          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_YERPS (Guanylate kinase OS=Yersinia pseudotuberculosis GN=gmk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            V  N YGTS  A+E V   G    LDID  GA+ +RA    A  IFI PPS  EL+ RLR  G ++E+ I K++  A  E+        +D+++ ND       +LK ++
Sbjct:   77 VFENYYGTSRLAIEQVLATGVDVFLDIDWQGAQQIRAKMPTARSIFILPPSKTELDRRLRGRGQDSEEVIAKRMEQAVAEM---AHYAEYDYLIVNDDFNLALSDLKTII 183          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_YERPN (Guanylate kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=gmk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            V  N YGTS  A+E V   G    LDID  GA+ +RA    A  IFI PPS  EL+ RLR  G ++E+ I K++  A  E+        +D+++ ND       +LK ++
Sbjct:   77 VFENYYGTSRLAIEQVLATGVDVFLDIDWQGAQQIRAKMPTARSIFILPPSKTELDRRLRGRGQDSEEVIAKRMEQAVAEM---AHYAEYDYLIVNDDFNLALSDLKTII 183          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_YERPE (Guanylate kinase OS=Yersinia pestis GN=gmk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            V  N YGTS  A+E V   G    LDID  GA+ +RA    A  IFI PPS  EL+ RLR  G ++E+ I K++  A  E+        +D+++ ND       +LK ++
Sbjct:   77 VFENYYGTSRLAIEQVLATGVDVFLDIDWQGAQQIRAKMPTARSIFILPPSKTELDRRLRGRGQDSEEVIAKRMEQAVAEM---AHYAEYDYLIVNDDFNLALSDLKTII 183          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_YERPA (Guanylate kinase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=gmk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            V  N YGTS  A+E V   G    LDID  GA+ +RA    A  IFI PPS  EL+ RLR  G ++E+ I K++  A  E+        +D+++ ND       +LK ++
Sbjct:   77 VFENYYGTSRLAIEQVLATGVDVFLDIDWQGAQQIRAKMPTARSIFILPPSKTELDRRLRGRGQDSEEVIAKRMEQAVAEM---AHYAEYDYLIVNDDFNLALSDLKTII 183          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_RICTY (Guanylate kinase OS=Rickettsia typhi GN=gmk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 34/121 (28.10%), Postives = 68/121 (56.20%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLLGLDGSIAATHH 367
            ++ + YGT  E V+ +   G   + DID  G RS++ +  + + IF+ PPS+E LE+RLR   T+ E+ I  ++++AQ EI        +D+++ ND   +  + + +++  + +   ++H
Sbjct:   78 IYNDYYGTPKEYVKMLLKQGLDVLFDIDWQGVRSIKKNTNNVVTIFVLPPSLEILEQRLRNRATDNEETIKLRMQSAQHEISYANE---YDYVVINDDFGQTLKKIHEIIVAERAKNFSYH 195          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_RHIL3 (Guanylate kinase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=gmk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 36/111 (32.43%), Postives = 61/111 (54.95%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRAS-PLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            VHGN YGT  E VE     G+  + DID  GA+ ++     D + IF+ PP+M EL+ RL     ++E+ I  +L N++ EI   +    +D+++ ND L    + ++ ++
Sbjct:   86 VHGNFYGTPREPVEQAMGEGRDMLFDIDWQGAQQLQEKMSADVVSIFVLPPTMTELQSRLHRRAEDSEEVIQTRLANSRAEIAHWRE---YDYVIVNDDLNAALDAVQSIV 193          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_PROM9 (Guanylate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=gmk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 39/108 (36.11%), Postives = 60/108 (55.56%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT + +V      G   +L+I+V GA+ ++    +++ IF+ PP   ELE R+R  GTE E+ I K+L  A  EI    +S  FD  L N  ++E  + + KL+
Sbjct:   78 GNYYGTPLSSVNEKITKGFTVLLEIEVEGAKQIKEKFPESLSIFLLPPDKAELERRIRNRGTEKEEAIKKRLLRASYEI---SASNQFDFELTNHNVDETAKRIIKLI 182          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_PARUW (Guanylate kinase OS=Protochlamydia amoebophila (strain UWE25) GN=gmk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 47/125 (37.60%), Postives = 69/125 (55.20%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLLGLDGSIAATHHTSPK 379
            ++   YGTS E VE     G   IL ID  GA  ++    +A FIFI PPS++EL+ RL    TE+ + I K+L  A+ E+E   ++  +D+ + ND L+E Y+ L+ +L     IA  H  S K
Sbjct:   81 LYDTYYGTSREWVEIQRQLGLHVILVIDTQGALQLQKL-CEATFIFIRPPSLDELKNRLINRQTESLEMIEKRLACAERELE---AAQYYDYEIINDDLQEAYQVLRSIL-----IAEYHRISKK 196          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_MESFL (Guanylate kinase OS=Mesoplasma florum GN=gmk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 39/108 (36.11%), Postives = 62/108 (57.41%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT  + VE   + GK  IL+I+V GA  V  +  + + IF+ PP++ ELE R++   TE++D I  +L  A  EI P K +  +D+++ ND +E     +  +L
Sbjct:   79 GNSYGTPRKYVEEKLNEGKNVILEIEVDGATQVLRNEENVLSIFLMPPTLNELESRIKGRATESDDKIKARLDKALLEI-PLKHN--YDYVVENDSVENAVSKITDIL 183          
The following BLAST results are available for this feature:
BLAST of FC876942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
KGUA_ALHEH5.054e-1136.70Guanylate kinase OS=Alkalilimnicola ehrlichei (str... [more]
KGUA_YERPS6.601e-1137.27Guanylate kinase OS=Yersinia pseudotuberculosis GN... [more]
KGUA_YERPN6.601e-1137.27Guanylate kinase OS=Yersinia pestis bv. Antiqua (s... [more]
KGUA_YERPE6.601e-1137.27Guanylate kinase OS=Yersinia pestis GN=gmk PE=3 SV... [more]
KGUA_YERPA6.601e-1137.27Guanylate kinase OS=Yersinia pestis bv. Antiqua (s... [more]
KGUA_RICTY6.601e-1128.10Guanylate kinase OS=Rickettsia typhi GN=gmk PE=3 S... [more]
KGUA_RHIL36.601e-1132.43Guanylate kinase OS=Rhizobium leguminosarum bv. vi... [more]
KGUA_PROM96.601e-1136.11Guanylate kinase OS=Prochlorococcus marinus (strai... [more]
KGUA_PARUW6.601e-1137.60Guanylate kinase OS=Protochlamydia amoebophila (st... [more]
KGUA_MESFL6.601e-1136.11Guanylate kinase OS=Mesoplasma florum GN=gmk PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1DB06RM1 EHR Citrus clementina cDNA clone KN0AAN1DB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876942 ID=FC876942; Name=FC876942; organism=Citrus clementina; type=EST; length=714bp
CTCTGTTCATGGAAATCTTTATGGAACCAGTGTTGAAGCTGTGGAGGCGG
TAGCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCCAGGGGCG
AGGTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCC
ACCTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAACAGGAACTGAAA
CAGAGGATCATATCCTAAAACAACTCAGAAATGCCCAGGAAGAGATTGAG
CCAGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATCAACT
TGAAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTA
TTGCTGCAACCCATCACACCTCACCCAAAGGGATTGATTTGCCAGCTGAT
CATTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGC
TGAAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCACTGA
AAGGCGGAGCACCTGGACGGACTAGAGGGCTTCAAGTTTATACAGTTGAT
TCATTTTCAGATGGTTTAAATGGGGTCAATAAGTTGAGCTAATAGCTCCC
ATCCTCATCGACGCTAACGTGGTTTCTCATTTAAAATATTTCTCACAGCT
CAACTTATATAATTTAGAAAAAAAAAGAGCCTTGATGAAGCTCTACCTGT
GATTTCGTAAAAAA
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