FC876942

Overview
NameFC876942
Unique NameFC876942
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig323 contig Ccv1_Contig323:181..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_NEIMA (Guanylate kinase OS=Neisseria meningitidis serogroup A GN=gmk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.218e-16
Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            V GN YGTS E V A+A AG   IL+IDV GA  VR +  +A+ IFI PPS + L  RL   GT++ + I ++L  A+ EIE    S +FD ++ ND L    E+L+ ++
Sbjct:   78 VFGNYYGTSAEGVNALAAAGYDVILEIDVQGAAQVRDALPEAVGIFILPPSFDVLAARLNGRGTDSREVIQRRLSKARHEIE---QSVLFDFVVVNDDLARAEEDLRHIV 184          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_NEIG1 (Guanylate kinase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=gmk PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.901e-16
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENL 322
            V GN YGTS E V A+A AG   IL+IDV GA  VR +  +A+ IFI PPS + L  RL+  GT++ + I ++L  A+ EIE    S +FD ++ ND LE+   +L
Sbjct:   78 VFGNYYGTSTEGVNALAAAGYDVILEIDVQGAAQVRNALPEAVGIFILPPSFDVLAARLKGRGTDSREVIQRRLSKARHEIE---QSVLFDFVVVNDDLEKAEGDL 180          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_SYNJA (Guanylate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=gmk PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.518e-15
Identity = 44/108 (40.74%), Postives = 68/108 (62.96%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT  E V      G+  +L+I++ GAR VR    DAI IF+ PPS+EELE R+R  G ++E  I ++L+ A++E++   +   FD+++ ND LE+  + L+ LL
Sbjct:  103 GNFYGTPREIVFQKLSQGQDVLLEIELAGARQVRQQCPDAIRIFLSPPSLEELERRIRERGQDSEASIQRRLQQARKELD---AKDEFDYVIVNDNLEQALQELEALL 207          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_NEIMB (Guanylate kinase OS=Neisseria meningitidis serogroup B GN=gmk PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.518e-15
Identity = 47/110 (42.73%), Postives = 66/110 (60.00%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            V GN YGT  E V A+A AG   IL+IDV GA  VR +  +A+ IFI PPS + L  RL   GT++ + I ++L  A+ EIE    S +FD ++ ND L    E+L+ ++
Sbjct:   78 VFGNYYGTGAEGVNALAAAGYDVILEIDVQGAAQVRDALPEAVGIFILPPSFDVLAARLNGRGTDSREVIQRRLSKARHEIE---QSVLFDFVVVNDDLARAEEDLRHIV 184          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_GEOKA (Guanylate kinase OS=Geobacillus kaustophilus GN=gmk PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.518e-15
Identity = 43/108 (39.81%), Postives = 69/108 (63.89%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT ++ VE     GK   L+I+V GA  VR +  +A+FIF+ PPS+ ELE+R+   GTE+++ I  +LR A+EE+E       +D+++ ND++E   E +K ++
Sbjct:   80 GNYYGTPIDYVEKTLAEGKDVFLEIEVQGAMKVRRAFPEALFIFLAPPSLTELEKRIMGRGTESKELIENRLRAAKEELE---MMDEYDYVVENDEVELACERIKAIV 184          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_TRIEI (Guanylate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=gmk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT    V    + G+  IL+I++ GAR ++ +  DA+ IFI PPSM ELEERL   G ++E+ I K+L+ A EE+E       FD  L ND +E+  +NL K+L
Sbjct:   77 GNFYGTPRVPVIENIEQGRSMILEIELQGARQIQRTFPDALRIFILPPSMAELEERLWGRGQDSEEAITKRLQRATEELEAATE---FDIQLVNDSIEDTLQNLDKIL 181          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_SYNY3 (Guanylate kinase OS=Synechocystis sp. (strain PCC 6803) GN=gmk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 46/109 (42.20%), Postives = 68/109 (62.39%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLLG 337
            GN YGT  + VE     GK  +L+I+V GAR ++ +   A  IFI PPS+E LEERLR  G+++E  I K+L  AQ+E++   ++  FD+ + ND L++    L KL+G
Sbjct:   83 GNYYGTPRQPVEEQIAQGKTVLLEIEVLGARQIKQTFPSARRIFILPPSVEVLEERLRGRGSDSETAIAKRLAQAQQELQ---AAAEFDYQVVNDDLDQALHRLVKLIG 188          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STAAW (Guanylate kinase OS=Staphylococcus aureus (strain MW2) GN=gmk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLE 304
            GN YGT V+ V+   D G    L+I+V GA+ VR    DA+FIF+ PPS+E L ERL   GTE+++ I  ++  A++E+E      ++D+++ ND++E
Sbjct:   80 GNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQSRINEARKEVE---MMNLYDYVVVNDEVE 174          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STAAS (Guanylate kinase OS=Staphylococcus aureus (strain MSSA476) GN=gmk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLE 304
            GN YGT V+ V+   D G    L+I+V GA+ VR    DA+FIF+ PPS+E L ERL   GTE+++ I  ++  A++E+E      ++D+++ ND++E
Sbjct:   80 GNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQSRINEARKEVE---MMNLYDYVVVNDEVE 174          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STAAC (Guanylate kinase OS=Staphylococcus aureus (strain COL) GN=gmk PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLE 304
            GN YGT V+ V+   D G    L+I+V GA+ VR    DA+FIF+ PPS+E L ERL   GTE+++ I  ++  A++E+E      ++D+++ ND++E
Sbjct:   80 GNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQSRINEARKEVE---MMNLYDYVVVNDEVE 174          
The following BLAST results are available for this feature:
BLAST of FC876942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
KGUA_NEIMA5.218e-1643.64Guanylate kinase OS=Neisseria meningitidis serogro... [more]
KGUA_NEIG18.901e-1645.28Guanylate kinase OS=Neisseria gonorrhoeae (strain ... [more]
KGUA_SYNJA1.518e-1540.74Guanylate kinase OS=Synechococcus sp. (strain JA-3... [more]
KGUA_NEIMB1.518e-1542.73Guanylate kinase OS=Neisseria meningitidis serogro... [more]
KGUA_GEOKA1.518e-1539.81Guanylate kinase OS=Geobacillus kaustophilus GN=gm... [more]
KGUA_TRIEI1.983e-1543.52Guanylate kinase OS=Trichodesmium erythraeum (stra... [more]
KGUA_SYNY31.983e-1542.20Guanylate kinase OS=Synechocystis sp. (strain PCC ... [more]
KGUA_STAAW2.590e-1540.82Guanylate kinase OS=Staphylococcus aureus (strain ... [more]
KGUA_STAAS2.590e-1540.82Guanylate kinase OS=Staphylococcus aureus (strain ... [more]
KGUA_STAAC2.590e-1540.82Guanylate kinase OS=Staphylococcus aureus (strain ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1DB06RM1 EHR Citrus clementina cDNA clone KN0AAN1DB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876942 ID=FC876942; Name=FC876942; organism=Citrus clementina; type=EST; length=714bp
CTCTGTTCATGGAAATCTTTATGGAACCAGTGTTGAAGCTGTGGAGGCGG
TAGCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCCAGGGGCG
AGGTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCC
ACCTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAACAGGAACTGAAA
CAGAGGATCATATCCTAAAACAACTCAGAAATGCCCAGGAAGAGATTGAG
CCAGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATCAACT
TGAAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTA
TTGCTGCAACCCATCACACCTCACCCAAAGGGATTGATTTGCCAGCTGAT
CATTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGC
TGAAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCACTGA
AAGGCGGAGCACCTGGACGGACTAGAGGGCTTCAAGTTTATACAGTTGAT
TCATTTTCAGATGGTTTAAATGGGGTCAATAAGTTGAGCTAATAGCTCCC
ATCCTCATCGACGCTAACGTGGTTTCTCATTTAAAATATTTCTCACAGCT
CAACTTATATAATTTAGAAAAAAAAAGAGCCTTGATGAAGCTCTACCTGT
GATTTCGTAAAAAA
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