FC876942

Overview
NameFC876942
Unique NameFC876942
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig323 contig Ccv1_Contig323:181..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_HAEI8 (Guanylate kinase OS=Haemophilus influenzae (strain 86-028NP) GN=gmk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGTS+ A+E     G    LDID  GA+ +R        IFI PPS+ ELE RL   G ++E+ I +++  A  EI        +D+++ ND  E+  ++L+ +L
Sbjct:   80 GNYYGTSLPAIEENLAKGIDVFLDIDWQGAQQIRKKVPSVKSIFILPPSLPELERRLIGRGQDSEEVIAERMSKAISEISHYDE---YDYVIVNDDFEKTLKDLQSIL 184          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_GLUOX (Guanylate kinase OS=Gluconobacter oxydans GN=gmk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 39/111 (35.14%), Postives = 58/111 (52.25%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRAS-PLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            V G  YGT    VE   DAG   + DID  G R +RA+ P D + +F+ PPS+EELE RL    ++  + I ++++ A +EI        FDH + N  L+      + +L
Sbjct:   79 VFGRGYGTPRAPVEEALDAGHDMVFDIDWQGHRLLRAALPDDVVSLFVLPPSLEELERRLNKRASDHPEEIARRMKAALDEISHWSE---FDHTIINSDLDTAISQARSVL 186          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_PSEU2 (Guanylate kinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=gmk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11
Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKL 331
            V GNLYGTS   ++   D G   IL+ID  GAR VRA    A  IFI PP+ + L +RL   G ++++ I  ++R A  E+        +++++ ND      E+LK +
Sbjct:   85 VFGNLYGTSQSHLQQTLDEGHDLILEIDWQGARQVRAQMPQARSIFILPPTQQALRQRLTNRGQDSDEIIEARMREAVSEMSHYSE---YEYVVVNDDFAGALEDLKAI 190          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_PSESM (Guanylate kinase OS=Pseudomonas syringae pv. tomato GN=gmk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11
Identity = 39/109 (35.78%), Postives = 58/109 (53.21%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKL 331
            V GNLYGTS   ++   D G   IL+ID  GAR VR     A  IFI PPS + L +RL   G ++++ I  ++R A  E+        +++++ ND      E+LK +
Sbjct:   85 VFGNLYGTSQSHLQQTLDEGHDLILEIDWQGARQVRTQMPQARSIFILPPSQQALRQRLTNRGQDSDEIIEARMREAVSEMSHYNE---YEYVVVNDDFAGALEDLKSI 190          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_PSE14 (Guanylate kinase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=gmk PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11
Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKL 331
            V GNLYGTS   ++   D G   IL+ID  GAR VRA    A  IFI PP+ + L +RL   G ++++ I  ++R A  E+        +++++ ND      E+LK +
Sbjct:   85 VFGNLYGTSQSHLQQTLDEGHDLILEIDWQGARQVRAQMPQARSIFILPPTQQALRQRLTNRGQDSDEIIEARMREAVSEMSHYNE---YEYVVVNDDFAGALEDLKAI 190          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_MYCGA (Guanylate kinase OS=Mycoplasma gallisepticum GN=gmk PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11
Identity = 36/107 (33.64%), Postives = 59/107 (55.14%), Query Frame = 2
Query:   14 NLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            N YGT +  V+ + D  +  IL+I+  G   V       + IF+ PPS +EL  RL+  GTE ++ I  +L  A +E    +   ++DH + ND LE+  E++K+L+
Sbjct:   87 NYYGTPLSLVKEILDKNENLILEIEYQGVIQVLRKGFRTLSIFVLPPSEDELVARLKKRGTENDEVIKHRLEQAVKEYAHRE---LYDHTIINDDLEKTIEDIKQLI 190          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_HAES1 (Guanylate kinase OS=Haemophilus somnus (strain 129Pt) GN=gmk PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11
Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGTS+  +E    AG    LDID  GAR +R    D   IFI PPS+  LE+RL   G +++D I K++  A +EI        +D+++ N   ++   +L+ +L
Sbjct:   80 GNYYGTSLLNIEKNLAAGIDVFLDIDWQGARQIREKRPDVKSIFILPPSISALEKRLIGRGQDSQDIIAKRMEKAADEISHYDE---YDYVIINADFDQALVDLEHIL 184          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_FUSNN (Guanylate kinase OS=Fusobacterium nucleatum subsp. nucleatum GN=gmk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11
Identity = 37/111 (33.33%), Postives = 64/111 (57.66%), Query Frame = 2
Query:    2 SVHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            +VHGN YGT    VE     G++ +L+IDV G   V+    +A  IF    + EELE+RLR   T++E+ I  +L+N+ +E+E       +D ++ N+++E+   +L  ++
Sbjct:   73 NVHGNYYGTLKSEVEERLKRGEKVLLEIDVQGGVQVKNKFPEANLIFFKTANKEELEKRLRGRNTDSEEVIQARLKNSLKELE---YESKYDRVIINNEIEQACNDLISII 180          
The following BLAST results are available for this feature:
BLAST of FC876942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
KGUA_HAEI86.601e-1136.11Guanylate kinase OS=Haemophilus influenzae (strain... [more]
KGUA_GLUOX6.601e-1135.14Guanylate kinase OS=Gluconobacter oxydans GN=gmk P... [more]
KGUA_PSEU28.621e-1135.78Guanylate kinase OS=Pseudomonas syringae pv. syrin... [more]
KGUA_PSESM8.621e-1135.78Guanylate kinase OS=Pseudomonas syringae pv. tomat... [more]
KGUA_PSE148.621e-1135.78Guanylate kinase OS=Pseudomonas syringae pv. phase... [more]
KGUA_MYCGA8.621e-1133.64Guanylate kinase OS=Mycoplasma gallisepticum GN=gm... [more]
KGUA_HAES18.621e-1136.11Guanylate kinase OS=Haemophilus somnus (strain 129... [more]
KGUA_FUSNN8.621e-1133.33Guanylate kinase OS=Fusobacterium nucleatum subsp.... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1DB06RM1 EHR Citrus clementina cDNA clone KN0AAN1DB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876942 ID=FC876942; Name=FC876942; organism=Citrus clementina; type=EST; length=714bp
CTCTGTTCATGGAAATCTTTATGGAACCAGTGTTGAAGCTGTGGAGGCGG
TAGCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCCAGGGGCG
AGGTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCC
ACCTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAACAGGAACTGAAA
CAGAGGATCATATCCTAAAACAACTCAGAAATGCCCAGGAAGAGATTGAG
CCAGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATCAACT
TGAAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTA
TTGCTGCAACCCATCACACCTCACCCAAAGGGATTGATTTGCCAGCTGAT
CATTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGC
TGAAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCACTGA
AAGGCGGAGCACCTGGACGGACTAGAGGGCTTCAAGTTTATACAGTTGAT
TCATTTTCAGATGGTTTAAATGGGGTCAATAAGTTGAGCTAATAGCTCCC
ATCCTCATCGACGCTAACGTGGTTTCTCATTTAAAATATTTCTCACAGCT
CAACTTATATAATTTAGAAAAAAAAAGAGCCTTGATGAAGCTCTACCTGT
GATTTCGTAAAAAA
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