FC876942

Overview
NameFC876942
Unique NameFC876942
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig323 contig Ccv1_Contig323:181..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STAA8 (Guanylate kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=gmk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLE 304
            GN YGT V+ V+   D G    L+I+V GA+ VR    DA+FIF+ PPS+E L ERL   GTE+++ I  ++  A++E+E      ++D+++ ND++E
Sbjct:   80 GNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQSRINEARKEVE---MMNLYDYVVVNDEVE 174          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STAA3 (Guanylate kinase OS=Staphylococcus aureus (strain USA300) GN=gmk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLE 304
            GN YGT V+ V+   D G    L+I+V GA+ VR    DA+FIF+ PPS+E L ERL   GTE+++ I  ++  A++E+E      ++D+++ ND++E
Sbjct:   80 GNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQSRINEARKEVE---MMNLYDYVVVNDEVE 174          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_GEOSL (Guanylate kinase OS=Geobacter sulfurreducens GN=gmk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            VHGN YGTS+  +E    AG   ILDID+ GAR ++      ++IFI PPS EEL  RL    +++++ I +++  A  EI   + S  +D+I+ NDQ     E LK ++
Sbjct:   76 VHGNCYGTSIRTLEENRAAGVDLILDIDIQGARQLQERFAGGVYIFILPPSFEELRRRLNGRSSDSDEVISRRINAAAGEI---RESRWYDYIIVNDQFSRAVEELKSVI 182          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_CHRVO (Guanylate kinase OS=Chromobacterium violaceum GN=gmk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLE 304
            V+GN YGTS   +    +AG+  +L+ID  GA  VR    DAI IFI PPS+EELE RLR   T+TE+ IL++L +A+ EI+       +D+I+ ND  E
Sbjct:   77 VYGNCYGTSAPWIRGRLEAGRDILLEIDWQGAEQVRKVFPDAIGIFIAPPSIEELERRLRGRDTDTEEVILRRLASARAEID---KIAEYDYIVVNDDFE 173          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_CARHZ (Guanylate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=gmk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 44/110 (40.00%), Postives = 69/110 (62.73%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            V+GN YGT  + V      G+  IL+ID+ GAR V+ +  + +F+FI PPS+  LEERLR  GT+ E+ I+K+++ A EEI    +   +D+++ ND LE    +L+ +L
Sbjct:   75 VYGNYYGTPKKPVFEALARGQDVILEIDIKGARQVKKTYPEGVFVFILPPSISILEERLRKRGTDKEEIIVKRMQMAWEEI---ANCDWYDYLILNDDLETAVNDLEAVL 181          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_SYMTH (Guanylate kinase OS=Symbiobacterium thermophilum GN=gmk PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.382e-15
Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            V+GN YGT    VE V   G+  ILDID  GAR+VR    DA+ +F+ PPSME L +R+ A GTE+ + + ++L  A E I  G +   +D+++ ND L      L+ ++
Sbjct:   78 VYGNYYGTPRGYVEEVTAQGQDVILDIDRVGARAVREQYPDAVSVFVIPPSMEALRQRIAARGTESPEAVARRLAEAPEWIREGLT---YDYVIVNDDLARAVAELRAII 184          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_BACHK (Guanylate kinase OS=Bacillus thuringiensis subsp. konkukian GN=gmk PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.382e-15
Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT ++ VE     GK   L+I+V GA  V+ +  + +FIF+ PPS+ EL+ R+   GTETED I  +L  A+EEI+       +D+++ NDQ+E   E +K ++
Sbjct:   80 GNYYGTPIDYVEKTLQEGKDVFLEIEVQGAIQVKKAFPEGVFIFLAPPSLSELKNRIVGRGTETEDVIENRLTVAKEEID---MMDAYDYVVENDQVELACERIKAIV 184          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_BACCZ (Guanylate kinase OS=Bacillus cereus (strain ZK / E33L) GN=gmk PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.382e-15
Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT ++ VE     GK   L+I+V GA  V+ +  + +FIF+ PPS+ EL+ R+   GTETED I  +L  A+EEI+       +D+++ NDQ+E   E +K ++
Sbjct:   80 GNYYGTPIDYVEKTLQEGKDVFLEIEVQGAIQVKKAFPEGVFIFLAPPSLSELKNRIVGRGTETEDVIENRLTVAKEEID---MMDAYDYVVENDQVELACERIKAIV 184          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_BACCR (Guanylate kinase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=gmk PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.382e-15
Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT ++ VE     GK   L+I+V GA  V+ +  + +FIF+ PPS+ EL+ R+   GTETED I  +L  A+EEIE       +D+++ NDQ+E   + +K ++
Sbjct:   80 GNYYGTPIDYVEKTLQEGKDVFLEIEVQGAIQVKKAFPEGVFIFLAPPSLSELKSRIVGRGTETEDVIENRLTVAKEEIE---MMDAYDYVVENDQVELACDRIKAIV 184          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_BACC1 (Guanylate kinase OS=Bacillus cereus (strain ATCC 10987) GN=gmk PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.382e-15
Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT ++ VE     GK   L+I+V GA  V+ +  + +FIF+ PPS+ EL+ R+   GTETED I  +L  A+EEI+       +D+++ NDQ+E   E +K ++
Sbjct:   80 GNYYGTPIDYVEKTLQEGKDVFLEIEVQGAIQVKKAFPEGVFIFLAPPSLSELKNRIVGRGTETEDVIENRLTVAKEEID---MMDAYDYVVENDQVELACERIKAIV 184          
The following BLAST results are available for this feature:
BLAST of FC876942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
KGUA_STAA82.590e-1540.82Guanylate kinase OS=Staphylococcus aureus (strain ... [more]
KGUA_STAA32.590e-1540.82Guanylate kinase OS=Staphylococcus aureus (strain ... [more]
KGUA_GEOSL2.590e-1539.09Guanylate kinase OS=Geobacter sulfurreducens GN=gm... [more]
KGUA_CHRVO2.590e-1546.00Guanylate kinase OS=Chromobacterium violaceum GN=g... [more]
KGUA_CARHZ2.590e-1540.00Guanylate kinase OS=Carboxydothermus hydrogenoform... [more]
KGUA_SYMTH3.382e-1540.00Guanylate kinase OS=Symbiobacterium thermophilum G... [more]
KGUA_BACHK3.382e-1539.81Guanylate kinase OS=Bacillus thuringiensis subsp. ... [more]
KGUA_BACCZ3.382e-1539.81Guanylate kinase OS=Bacillus cereus (strain ZK / E... [more]
KGUA_BACCR3.382e-1539.81Guanylate kinase OS=Bacillus cereus (strain ATCC 1... [more]
KGUA_BACC13.382e-1539.81Guanylate kinase OS=Bacillus cereus (strain ATCC 1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1DB06RM1 EHR Citrus clementina cDNA clone KN0AAN1DB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876942 ID=FC876942; Name=FC876942; organism=Citrus clementina; type=EST; length=714bp
CTCTGTTCATGGAAATCTTTATGGAACCAGTGTTGAAGCTGTGGAGGCGG
TAGCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCCAGGGGCG
AGGTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCC
ACCTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAACAGGAACTGAAA
CAGAGGATCATATCCTAAAACAACTCAGAAATGCCCAGGAAGAGATTGAG
CCAGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATCAACT
TGAAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTA
TTGCTGCAACCCATCACACCTCACCCAAAGGGATTGATTTGCCAGCTGAT
CATTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGC
TGAAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCACTGA
AAGGCGGAGCACCTGGACGGACTAGAGGGCTTCAAGTTTATACAGTTGAT
TCATTTTCAGATGGTTTAAATGGGGTCAATAAGTTGAGCTAATAGCTCCC
ATCCTCATCGACGCTAACGTGGTTTCTCATTTAAAATATTTCTCACAGCT
CAACTTATATAATTTAGAAAAAAAAAGAGCCTTGATGAAGCTCTACCTGT
GATTTCGTAAAAAA
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