FC876942

Overview
NameFC876942
Unique NameFC876942
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig323 contig Ccv1_Contig323:181..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_THEMA (Guanylate kinase OS=Thermotoga maritima GN=gmk PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15
Identity = 44/104 (42.31%), Postives = 63/104 (60.58%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYE 316
            VHG+LYGT    VE+  + GK  +LDIDV GA SV+    + +FI++ PPS  +L ER+   GTE E  +L +L NA+ E+        FD+I+ N+ LE+  E
Sbjct:   74 VHGHLYGTLRSFVESHINEGKDVVLDIDVQGALSVKKKYSNTVFIYVAPPSYADLRERILKRGTEKEADVLVRLENAKWEL---MFMDEFDYIVVNENLEDAVE 174          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STAHJ (Guanylate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=gmk PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15
Identity = 39/108 (36.11%), Postives = 68/108 (62.96%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT V+ V+    AG    L+I+V GA+ VR    DA+FIF+ PPS++ L+ERL   GTE+++ I  ++  A++E+E      ++D+++ ND++    E ++ ++
Sbjct:   80 GNYYGTPVQYVKDTMAAGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLKERLVGRGTESDEKIQSRVNEARKEVE---MMNLYDYVVVNDEVHLAKERIQSIV 184          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STAEQ (Guanylate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gmk PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15
Identity = 38/108 (35.19%), Postives = 68/108 (62.96%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT V+ V+   + G    L+I+V GA+ VR    DA+FIF+ PPS+++L ERL   GTE+++ I  ++  A++E+E      ++D+++ ND++E     ++ ++
Sbjct:   80 GNYYGTPVQYVKDTMEEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDDLRERLVGRGTESDEKIQSRVNEARKEVE---MMNLYDYVVVNDEVELAKNRIQSIV 184          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STAAN (Guanylate kinase OS=Staphylococcus aureus (strain N315) GN=gmk PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15
Identity = 39/98 (39.80%), Postives = 62/98 (63.27%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLE 304
            GN YGT V+ V+   D G    L+I+V GA+ VR    DA+FIF+ PPS++ L ERL   GTE+ + I  ++  A++E+E      ++D+++ ND++E
Sbjct:   80 GNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLRERLVGRGTESNEKIQSRINEARKEVE---MMNLYDYVVVNDEVE 174          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STAAM (Guanylate kinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gmk PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15
Identity = 39/98 (39.80%), Postives = 62/98 (63.27%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLE 304
            GN YGT V+ V+   D G    L+I+V GA+ VR    DA+FIF+ PPS++ L ERL   GTE+ + I  ++  A++E+E      ++D+++ ND++E
Sbjct:   80 GNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLRERLVGRGTESNEKIQSRINEARKEVE---MMNLYDYVVVNDEVE 174          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_DESHY (Guanylate kinase OS=Desulfitobacterium hafniense (strain Y51) GN=gmk PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15
Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT   AVE    AG   IL+I++ GA  V+      +FIF+ PPSM+EL +R+   GTE+E+ I K+L+ A  E+E       +D+++ ND++    + LK +L
Sbjct:   79 GNYYGTPQFAVEQAIQAGNDVILEIEIQGALQVKQRFPQGVFIFVVPPSMDELSQRIHKRGTESEEVIQKRLQTAARELEYVSE---YDYVVVNDEIPLAVDKLKSIL 183          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_ANASP (Guanylate kinase OS=Anabaena sp. (strain PCC 7120) GN=gmk PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15
Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT  EAV     +GK  +L+I++ GAR +R S  +A+ IFI PPS EELE R+R  G ++E+ I ++L+ A+EEI+   ++  FD  + ND  E   + ++  L
Sbjct:   93 GNYYGTPREAVLNQVQSGKLVVLEIELAGARQIRTSFPEALSIFILPPSFEELENRIRGRGQDSEEAIARRLQRAKEEIQ---AADEFDIQIVNDDFEAALQAIEVAL 197          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_AZOSE (Guanylate kinase OS=Azoarcus sp. (strain EbN1) GN=gmk PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.285e-14
Identity = 43/106 (40.57%), Postives = 68/106 (64.15%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENL 322
            VHGN Y TS   ++     G+  +L+ID  GA+ VR S  DA+ +FI PPS+EELE RLR  GT+++D I+++L  A+ E+   +  G FD+++ N+ L+   ++L
Sbjct:   74 VHGNYYATSKVWLKQQIATGRDILLEIDWQGAQQVRKSFPDAVGVFILPPSLEELEARLRGRGTDSDDVIMRRLLGARGEM---RHVGEFDYVILNNDLQCALDDL 176          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_PROMM (Guanylate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=gmk PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14
Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLLGL 340
            GN YGT  + VE     G+  +L+I++ GAR VR S  +A  IF+ PPS EELE R+R   T+ E+ I ++L  A+EE+   +    FD ++ ND L+     L+ L+GL
Sbjct:   81 GNRYGTPRQPVEQQLSLGRPVLLEIELEGARQVRRSFPEAFQIFLAPPSFEELERRIRGRATDPEEAIQRRLARAREELMAQQE---FDAVVINDNLQVAVIELESLMGL 187          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_PROMA (Guanylate kinase OS=Prochlorococcus marinus GN=gmk PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14
Identity = 44/108 (40.74%), Postives = 64/108 (59.26%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT     +     GK+ +L+I++ GAR VR +  +   IFI PPS EELE+R+R  GT++E  I  +L  A+EE+    +   FD I+ NDQL+     +KKL+
Sbjct:   78 GNFYGTPRAQAQEKISVGKKVLLEIELDGARQVRKTFPEGFQIFIAPPSFEELEKRIRTRGTDSELAIQSRLNRAKEEL---LAKNEFDAIVINDQLDIALLEIKKLI 182          
The following BLAST results are available for this feature:
BLAST of FC876942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
KGUA_THEMA9.841e-1542.31Guanylate kinase OS=Thermotoga maritima GN=gmk PE=... [more]
KGUA_STAHJ9.841e-1536.11Guanylate kinase OS=Staphylococcus haemolyticus (s... [more]
KGUA_STAEQ9.841e-1535.19Guanylate kinase OS=Staphylococcus epidermidis (st... [more]
KGUA_STAAN9.841e-1539.80Guanylate kinase OS=Staphylococcus aureus (strain ... [more]
KGUA_STAAM9.841e-1539.80Guanylate kinase OS=Staphylococcus aureus (strain ... [more]
KGUA_DESHY9.841e-1538.89Guanylate kinase OS=Desulfitobacterium hafniense (... [more]
KGUA_ANASP9.841e-1540.74Guanylate kinase OS=Anabaena sp. (strain PCC 7120)... [more]
KGUA_AZOSE1.285e-1440.57Guanylate kinase OS=Azoarcus sp. (strain EbN1) GN=... [more]
KGUA_PROMM1.679e-1440.00Guanylate kinase OS=Prochlorococcus marinus (strai... [more]
KGUA_PROMA2.192e-1440.74Guanylate kinase OS=Prochlorococcus marinus GN=gmk... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1DB06RM1 EHR Citrus clementina cDNA clone KN0AAN1DB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876942 ID=FC876942; Name=FC876942; organism=Citrus clementina; type=EST; length=714bp
CTCTGTTCATGGAAATCTTTATGGAACCAGTGTTGAAGCTGTGGAGGCGG
TAGCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCCAGGGGCG
AGGTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCC
ACCTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAACAGGAACTGAAA
CAGAGGATCATATCCTAAAACAACTCAGAAATGCCCAGGAAGAGATTGAG
CCAGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATCAACT
TGAAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTA
TTGCTGCAACCCATCACACCTCACCCAAAGGGATTGATTTGCCAGCTGAT
CATTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGC
TGAAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCACTGA
AAGGCGGAGCACCTGGACGGACTAGAGGGCTTCAAGTTTATACAGTTGAT
TCATTTTCAGATGGTTTAAATGGGGTCAATAAGTTGAGCTAATAGCTCCC
ATCCTCATCGACGCTAACGTGGTTTCTCATTTAAAATATTTCTCACAGCT
CAACTTATATAATTTAGAAAAAAAAAGAGCCTTGATGAAGCTCTACCTGT
GATTTCGTAAAAAA
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