FC876942

Overview
NameFC876942
Unique NameFC876942
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig323 contig Ccv1_Contig323:181..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_MYXXD (Guanylate kinase OS=Myxococcus xanthus (strain DK 1622) GN=gmk PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14
Identity = 39/110 (35.45%), Postives = 67/110 (60.91%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            V+G+ YG+    V+         I DIDV G ++++    DA+ IF+ PPSMEELE RLR   T++++ I +++  A+ EIE G +S  +D+++ ND  E  + +L+ ++
Sbjct:   81 VYGHFYGSPQSVVDEARARKSAAIFDIDVQGGQAIKRKHPDAVTIFVLPPSMEELERRLRDRQTDSDETIRRRMLAARSEIERGIAS--YDYVVVNDDFERAFSDLRSVV 188          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_PROMT (Guanylate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=gmk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14
Identity = 40/113 (35.40%), Postives = 69/113 (61.06%), Query Frame = 2
Query:    2 SVHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLLGL 340
            S   N YGT  + V+   + G   +L+I++ GAR +R S  +A  IF+ PP++ ELE+R+R  GTETE+ I  +L  A++E+   K    FD ++ N+ +E+ ++ ++  +GL
Sbjct:   75 SFSNNFYGTPKKIVKEKIEKGTNVLLEIELEGARQIRKSFPEAFQIFLAPPNLYELEKRIRGRGTETEESIRDRLSIAEKELIAQKE---FDAVVINEDIEKAFKEIEGFMGL 184          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STRA5 (Guanylate kinase OS=Streptococcus agalactiae serotype V GN=gmk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT +  V    D G    L+I+V GA  V++   D +FIF+ PP +EELEERL   GT++ + I +++  A+EEI   +    +D+ + NDQ+    E +K+++
Sbjct:   79 GNYYGTPLSYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFIFLTPPDLEELEERLVGRGTDSPEVIAQRIERAKEEIALMRE---YDYAVVNDQVSLAAERVKRVI 183          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STRA3 (Guanylate kinase OS=Streptococcus agalactiae serotype III GN=gmk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT +  V    D G    L+I+V GA  V++   D +FIF+ PP +EELEERL   GT++ + I +++  A+EEI   +    +D+ + NDQ+    E +K+++
Sbjct:   79 GNYYGTPLSYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFIFLTPPDLEELEERLVGRGTDSPEVIAQRIERAKEEIALMRE---YDYAVVNDQVSLAAERVKRVI 183          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STRA1 (Guanylate kinase OS=Streptococcus agalactiae serotype Ia GN=gmk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT +  V    D G    L+I+V GA  V++   D +FIF+ PP +EELEERL   GT++ + I +++  A+EEI   +    +D+ + NDQ+    E +K+++
Sbjct:   79 GNYYGTPLSYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFIFLTPPDLEELEERLVGRGTDSPEVIAQRIERAKEEIALMRE---YDYAVVNDQVSLAAERVKRVI 183          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_LACS1 (Guanylate kinase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=gmk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 39/107 (36.45%), Postives = 66/107 (61.68%), Query Frame = 2
Query:   14 NLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            N YGT ++ V  + D+GK   L+I+V GA  VR    D +FIF+ PP + EL +R+   GT+  D I K+++ A +EIE  ++   +D+ + ND++E+  E +K ++
Sbjct:   80 NYYGTPLKYVNEMLDSGKDVFLEIEVKGAMQVREKAPDGLFIFLTPPDLMELRQRIINRGTDDIDTINKRMKKAVDEIEMMQN---YDYAVVNDEVEKAAEKIKTII 183          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_AGRT5 (Guanylate kinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=gmk PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 41/111 (36.94%), Postives = 65/111 (58.56%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRAS-PLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            VHGN YGT  E VEA   AG+  + DID  GA  ++     D + IFI PP+M EL+ RL     ++E+ I  +L N++ EIE  +    +D+++ ND L+  +E ++ ++
Sbjct:   86 VHGNFYGTPREPVEAAMAAGRDMLFDIDWQGAEQLQDKMKADVVSIFILPPTMTELQSRLHRRAEDSEEVIKTRLLNSRAEIEHWRD---YDYVILNDDLQAAFEGIEAIV 193          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_THETN (Guanylate kinase OS=Thermoanaerobacter tengcongensis GN=gmk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 37/110 (33.64%), Postives = 66/110 (60.00%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            V+ + YGT  E V    + G   +L+ID+ GA  V+    + +FIFI PPSMEEL  R++  GTE+E+ I+K+ ++A EE+        +++++ ND ++   E ++ ++
Sbjct:   78 VYDHYYGTPKEFVLKNLEEGNDVVLEIDIQGALKVKEKFPEGVFIFILPPSMEELRNRIKKRGTESEEEIIKRFKSAYEELNYVSK---YNYVVINDDVDRAVEKIRAII 184          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_SYNAS (Guanylate kinase OS=Syntrophus aciditrophicus (strain SB) GN=gmk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 42/126 (33.33%), Postives = 74/126 (58.73%), Query Frame = 2
Query:    8 HGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLLGLDGSIAATHHTSPKGI 385
            +G  YGTS + +  V + G+  ILDI+  GA++++ +    I++F+ PPS+ EL+ RLR  G E+E  I K+L   +EEI   +    +D++++ND LE+  E L+ +   + S A+      +G+
Sbjct:   82 YGRYYGTSGKVMTRVLEQGRDMILDIEPRGAKTLKKNYQGGIYVFVLPPSLAELKARLRKRG-ESEAEIRKRLDKVREEIAEARG---YDYVIFNDSLEKAVERLQVIYQAEKSRASRMSKQIQGV 203          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_SPHAL (Guanylate kinase OS=Sphingopyxis alaskensis GN=gmk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSV--RASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            V G+ YGT    VE +  AGK  + DID  GA+ +   A P D + +F+ PP+MEELE RLRA GT++++ I  ++  A  EI        +D++L ND + ECY  +  +L
Sbjct:   82 VFGHRYGTPRAPVEELLAAGKDVLFDIDWQGAQQLYQEAGP-DVVRVFVLPPTMEELERRLRARGTDSDEVIAARMARAANEISHWDG---YDYVLINDHVGECYGEVMAIL 189          
The following BLAST results are available for this feature:
BLAST of FC876942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
KGUA_MYXXD2.192e-1435.45Guanylate kinase OS=Myxococcus xanthus (strain DK ... [more]
KGUA_PROMT3.740e-1435.40Guanylate kinase OS=Prochlorococcus marinus (strai... [more]
KGUA_STRA51.088e-1337.04Guanylate kinase OS=Streptococcus agalactiae serot... [more]
KGUA_STRA31.088e-1337.04Guanylate kinase OS=Streptococcus agalactiae serot... [more]
KGUA_STRA11.088e-1337.04Guanylate kinase OS=Streptococcus agalactiae serot... [more]
KGUA_LACS11.088e-1336.45Guanylate kinase OS=Lactobacillus salivarius subsp... [more]
KGUA_AGRT51.088e-1336.94Guanylate kinase OS=Agrobacterium tumefaciens (str... [more]
KGUA_THETN1.421e-1333.64Guanylate kinase OS=Thermoanaerobacter tengcongens... [more]
KGUA_SYNAS1.421e-1333.33Guanylate kinase OS=Syntrophus aciditrophicus (str... [more]
KGUA_SPHAL1.421e-1339.29Guanylate kinase OS=Sphingopyxis alaskensis GN=gmk... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1DB06RM1 EHR Citrus clementina cDNA clone KN0AAN1DB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876942 ID=FC876942; Name=FC876942; organism=Citrus clementina; type=EST; length=714bp
CTCTGTTCATGGAAATCTTTATGGAACCAGTGTTGAAGCTGTGGAGGCGG
TAGCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCCAGGGGCG
AGGTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCC
ACCTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAACAGGAACTGAAA
CAGAGGATCATATCCTAAAACAACTCAGAAATGCCCAGGAAGAGATTGAG
CCAGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATCAACT
TGAAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTA
TTGCTGCAACCCATCACACCTCACCCAAAGGGATTGATTTGCCAGCTGAT
CATTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGC
TGAAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCACTGA
AAGGCGGAGCACCTGGACGGACTAGAGGGCTTCAAGTTTATACAGTTGAT
TCATTTTCAGATGGTTTAAATGGGGTCAATAAGTTGAGCTAATAGCTCCC
ATCCTCATCGACGCTAACGTGGTTTCTCATTTAAAATATTTCTCACAGCT
CAACTTATATAATTTAGAAAAAAAAAGAGCCTTGATGAAGCTCTACCTGT
GATTTCGTAAAAAA
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