FC876942

Overview
NameFC876942
Unique NameFC876942
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig323 contig Ccv1_Contig323:181..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_CLOAB (Guanylate kinase OS=Clostridium acetobutylicum GN=gmk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 38/110 (34.55%), Postives = 66/110 (60.00%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            V+GN YGT  ++V    D G+  IL+ID+ GA  V+ +  + +FIFI PPSMEEL++R+   G+ETE  ++ + ++A +EI        +++ + ND +E     +  ++
Sbjct:   75 VYGNYYGTPKKSVCEKIDNGENVILEIDIQGALKVKENYPEGVFIFILPPSMEELKKRIIGRGSETEKSLMTRFKSAYKEINYVSK---YNYAIINDTVENAVTKINSII 181          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_RICBR (Guanylate kinase OS=Rickettsia bellii (strain RML369-C) GN=gmk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.400e-13
Identity = 38/110 (34.55%), Postives = 65/110 (59.09%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            ++ N YGT  + VE + + G   + DID  GARS++ + ++A+ IFI PP++E LE+RLR    + E+ I  ++ +AQ EI     S  +DHI+ ND   +  + +  ++
Sbjct:   77 IYDNYYGTPKKHVENLLNQGLDVLFDIDWQGARSIKQNAVNAVSIFILPPNLEVLEQRLRNRAADNEEAIQLRMASAQAEI---SHSNEYDHIITNDDFNDTIQQIHTII 183          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_RUBXD (Guanylate kinase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=gmk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = 2
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GNLYGT    VE   ++G   IL+I++ GAR VR    DA+ IF+  PS+EE   RL    TE+ED + ++L  A EE+    +   FD  + ND  E   E + +++
Sbjct:   77 GNLYGTPAHRVEEYLESGLSVILEIELQGARKVRRKRPDAVMIFVRAPSLEETRRRLEGRATESEDAVQRRLATAVEEV---AARDEFDCEVVNDDYERAREEMIEIM 181          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_NITMU (Guanylate kinase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=gmk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 40/110 (36.36%), Postives = 69/110 (62.73%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            ++GN YGTS + +     +G+  +L+ID  GAR VRA    A+ IF+ PPS+E LE RLR    ++ + I ++L  A+EE+     +G +++I+ ND+L+   ++LK ++
Sbjct:   77 LYGNFYGTSKKWINETMTSGRDILLEIDSQGARQVRAVFPVAVGIFVLPPSLEVLEMRLRQRAQDSLEAISRRLAAAREEL---SHAGEYNYIIINDKLDRALQDLKCII 183          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_IDILO (Guanylate kinase OS=Idiomarina loihiensis GN=gmk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            V GN YGTS + VE++   GK   LDID  GA+ VR    +   +FI PPS+E LEERLR  G ++++ I +++  AQ E+        FD++L ND       +L+ ++
Sbjct:   81 VFGNYYGTSRKVVESLLAEGKDVFLDIDWQGAQQVREHHPEVRSVFIVPPSLEILEERLRVRGQDSDEVIAERMAKAQAEMSHYHE---FDYLLVNDDFNNSLASLEHIV 187          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_BRUSU (Guanylate kinase OS=Brucella suis GN=gmk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 41/114 (35.96%), Postives = 64/114 (56.14%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRAS-PLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLLGLD 343
            VHGN YGT  E  E     G+  + DID  GA  ++A  P D + IFI PP+M EL++RL     +T + I  +L+NA+ EI+       +D+I+ N+ L+  Y  +K ++  +
Sbjct:   86 VHGNFYGTLRETAEIALADGQDMLFDIDWQGADQLQAKMPADVVSIFILPPTMRELQQRLNRRAEDTAEVIETRLQNARFEIQKWVK---YDYIVINEDLDRSYAAIKSIINAE 196          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_BRUME (Guanylate kinase OS=Brucella melitensis GN=gmk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 41/114 (35.96%), Postives = 64/114 (56.14%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRAS-PLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLLGLD 343
            VHGN YGT  E  E     G+  + DID  GA  ++A  P D + IFI PP+M EL++RL     +T + I  +L+NA+ EI+       +D+I+ N+ L+  Y  +K ++  +
Sbjct:   86 VHGNFYGTLRETAEIALADGQDMLFDIDWQGADQLQAKMPADVVSIFILPPTMRELQQRLNRRAEDTAEVIETRLQNARFEIQKWVK---YDYIVINEDLDRSYAAIKSIINAE 196          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_BRUAB (Guanylate kinase OS=Brucella abortus GN=gmk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 41/114 (35.96%), Postives = 64/114 (56.14%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRAS-PLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLLGLD 343
            VHGN YGT  E  E     G+  + DID  GA  ++A  P D + IFI PP+M EL++RL     +T + I  +L+NA+ EI+       +D+I+ N+ L+  Y  +K ++  +
Sbjct:   86 VHGNFYGTLRETAEIALADGQDMLFDIDWQGADQLQAKMPADVVSIFILPPTMRELQQRLNRRAEDTAEVIETRLQNARFEIQKWVK---YDYIVINEDLDRSYAAIKSIINAE 196          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_BRUA2 (Guanylate kinase OS=Brucella abortus (strain 2308) GN=gmk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 41/114 (35.96%), Postives = 64/114 (56.14%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRAS-PLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLLGLD 343
            VHGN YGT  E  E     G+  + DID  GA  ++A  P D + IFI PP+M EL++RL     +T + I  +L+NA+ EI+       +D+I+ N+ L+  Y  +K ++  +
Sbjct:   86 VHGNFYGTLRETAEIALADGQDMLFDIDWQGADQLQAKMPADVVSIFILPPTMRELQQRLNRRAEDTAEVIETRLQNARFEIQKWVK---YDYIVINEDLDRSYAAIKSIINAE 196          
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_THICR (Guanylate kinase OS=Thiomicrospira crunogena (strain XCL-2) GN=gmk PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = 2
Query:    5 VHGNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKL 331
            V  N YGTS   VE+     K  IL+ID  GA+ VR    DA+ +FI PPS++ELE+RLR  GT++ED I +++ +A  E+   K    FD+++ N+  +     L  +
Sbjct:   74 VFDNYYGTSKSVVESKLAEDKDVILEIDWQGAQQVRKLIPDAVSVFILPPSLKELEKRLRGRGTDSEDVIERRMSDAVNEM---KHFNEFDYLVINNHFDTALSELHSI 179          
The following BLAST results are available for this feature:
BLAST of FC876942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
KGUA_CLOAB4.135e-1334.55Guanylate kinase OS=Clostridium acetobutylicum GN=... [more]
KGUA_RICBR5.400e-1334.55Guanylate kinase OS=Rickettsia bellii (strain RML3... [more]
KGUA_RUBXD7.053e-1337.96Guanylate kinase OS=Rubrobacter xylanophilus (stra... [more]
KGUA_NITMU7.053e-1336.36Guanylate kinase OS=Nitrosospira multiformis (stra... [more]
KGUA_IDILO7.053e-1338.18Guanylate kinase OS=Idiomarina loihiensis GN=gmk P... [more]
KGUA_BRUSU7.053e-1335.96Guanylate kinase OS=Brucella suis GN=gmk PE=3 SV=1[more]
KGUA_BRUME7.053e-1335.96Guanylate kinase OS=Brucella melitensis GN=gmk PE=... [more]
KGUA_BRUAB7.053e-1335.96Guanylate kinase OS=Brucella abortus GN=gmk PE=3 S... [more]
KGUA_BRUA27.053e-1335.96Guanylate kinase OS=Brucella abortus (strain 2308)... [more]
KGUA_THICR9.211e-1338.53Guanylate kinase OS=Thiomicrospira crunogena (stra... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1DB06RM1 EHR Citrus clementina cDNA clone KN0AAN1DB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876942 ID=FC876942; Name=FC876942; organism=Citrus clementina; type=EST; length=714bp
CTCTGTTCATGGAAATCTTTATGGAACCAGTGTTGAAGCTGTGGAGGCGG
TAGCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCCAGGGGCG
AGGTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCC
ACCTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAACAGGAACTGAAA
CAGAGGATCATATCCTAAAACAACTCAGAAATGCCCAGGAAGAGATTGAG
CCAGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATCAACT
TGAAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTA
TTGCTGCAACCCATCACACCTCACCCAAAGGGATTGATTTGCCAGCTGAT
CATTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGC
TGAAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCACTGA
AAGGCGGAGCACCTGGACGGACTAGAGGGCTTCAAGTTTATACAGTTGAT
TCATTTTCAGATGGTTTAAATGGGGTCAATAAGTTGAGCTAATAGCTCCC
ATCCTCATCGACGCTAACGTGGTTTCTCATTTAAAATATTTCTCACAGCT
CAACTTATATAATTTAGAAAAAAAAAGAGCCTTGATGAAGCTCTACCTGT
GATTTCGTAAAAAA
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