FC876942

Overview
NameFC876942
Unique NameFC876942
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig323 contig Ccv1_Contig323:181..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STRPM (Guanylate kinase OS=Streptococcus pyogenes serotype M28 GN=gmk PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 36/108 (33.33%), Postives = 65/108 (60.19%), Query Frame = 2 
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT +  V    D G    L+I+V GA  V++   D +F+F+ PP ++ELE+RL   GT++++ I +++  A+EEI   +    +D+ + ND++    E +K+++
Sbjct:   79 GNYYGTPLTYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKRII 183
[Close]
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STRPF (Guanylate kinase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=gmk PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 36/108 (33.33%), Postives = 65/108 (60.19%), Query Frame = 2 
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT +  V    D G    L+I+V GA  V++   D +F+F+ PP ++ELE+RL   GT++++ I +++  A+EEI   +    +D+ + ND++    E +K+++
Sbjct:   79 GNYYGTPLTYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKRII 183
[Close]
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STRPD (Guanylate kinase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=gmk PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 36/108 (33.33%), Postives = 65/108 (60.19%), Query Frame = 2 
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT +  V    D G    L+I+V GA  V++   D +F+F+ PP ++ELE+RL   GT++++ I +++  A+EEI   +    +D+ + ND++    E +K+++
Sbjct:   79 GNYYGTPLTYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKRII 183
[Close]
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STRPC (Guanylate kinase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=gmk PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 36/108 (33.33%), Postives = 65/108 (60.19%), Query Frame = 2 
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT +  V    D G    L+I+V GA  V++   D +F+F+ PP ++ELE+RL   GT++++ I +++  A+EEI   +    +D+ + ND++    E +K+++
Sbjct:   79 GNYYGTPLTYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKRII 183
[Close]
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STRPB (Guanylate kinase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=gmk PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 36/108 (33.33%), Postives = 65/108 (60.19%), Query Frame = 2 
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT +  V    D G    L+I+V GA  V++   D +F+F+ PP ++ELE+RL   GT++++ I +++  A+EEI   +    +D+ + ND++    E +K+++
Sbjct:   79 GNYYGTPLTYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKRII 183
[Close]
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STRP8 (Guanylate kinase OS=Streptococcus pyogenes serotype M18 GN=gmk PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 36/108 (33.33%), Postives = 65/108 (60.19%), Query Frame = 2 
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT +  V    D G    L+I+V GA  V++   D +F+F+ PP ++ELE+RL   GT++++ I +++  A+EEI   +    +D+ + ND++    E +K+++
Sbjct:   79 GNYYGTPLTYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKRII 183
[Close]
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STRP6 (Guanylate kinase OS=Streptococcus pyogenes serotype M6 GN=gmk PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 36/108 (33.33%), Postives = 65/108 (60.19%), Query Frame = 2 
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT +  V    D G    L+I+V GA  V++   D +F+F+ PP ++ELE+RL   GT++++ I +++  A+EEI   +    +D+ + ND++    E +K+++
Sbjct:   79 GNYYGTPLTYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKRII 183
[Close]
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STRP3 (Guanylate kinase OS=Streptococcus pyogenes serotype M3 GN=gmk PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 36/108 (33.33%), Postives = 65/108 (60.19%), Query Frame = 2 
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT +  V    D G    L+I+V GA  V++   D +F+F+ PP ++ELE+RL   GT++++ I +++  A+EEI   +    +D+ + ND++    E +K+++
Sbjct:   79 GNYYGTPLTYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKRII 183
[Close]
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_STRP1 (Guanylate kinase OS=Streptococcus pyogenes serotype M1 GN=gmk PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 36/108 (33.33%), Postives = 65/108 (60.19%), Query Frame = 2 
Query:   11 GNLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            GN YGT +  V    D G    L+I+V GA  V++   D +F+F+ PP ++ELE+RL   GT++++ I +++  A+EEI   +    +D+ + ND++    E +K+++
Sbjct:   79 GNYYGTPLTYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKRII 183
[Close]
BLAST of FC876942 vs. ExPASy Swiss-Prot
Match: KGUA_OCEIH (Guanylate kinase OS=Oceanobacillus iheyensis GN=gmk PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 35/107 (32.71%), Postives = 67/107 (62.62%), Query Frame = 2 
Query:   14 NLYGTSVEAVEAVADAGKRCILDIDVPGARSVRASPLDAIFIFICPPSMEELEERLRATGTETEDHILKQLRNAQEEIEPGKSSGIFDHILYNDQLEECYENLKKLL 334
            N YGT    VE   + G+   L+I+V GA  V+ +  + +FIF+ PPS++EL+ R+ + GTE+++ +L +L+ A+ EIE       +D+++ ND+++   + +K ++
Sbjct:   80 NYYGTPRNYVEETLENGQDVFLEIEVQGALQVKENFPEGVFIFLFPPSLDELKNRIVSRGTESQELVLNRLKEARNEIE---MMDAYDYVVVNDKVQHAVDKVKTII 183
The following BLAST results are available for this feature:
BLAST of FC876942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
KGUA_STRPM9.211e-1333.33Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_STRPF9.211e-1333.33Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_STRPD9.211e-1333.33Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_STRPC9.211e-1333.33Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_STRPB9.211e-1333.33Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_STRP89.211e-1333.33Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_STRP69.211e-1333.33Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_STRP39.211e-1333.33Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_STRP19.211e-1333.33Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_OCEIH9.211e-1332.71Guanylate kinase OS=Oceanobacillus iheyensis GN=gm... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1DB06RM1 EHR Citrus clementina cDNA clone KN0AAN1DB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876942 ID=FC876942; Name=FC876942; organism=Citrus clementina; type=EST; length=714bp
CTCTGTTCATGGAAATCTTTATGGAACCAGTGTTGAAGCTGTGGAGGCGG
TAGCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCCAGGGGCG
AGGTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCC
ACCTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAACAGGAACTGAAA
CAGAGGATCATATCCTAAAACAACTCAGAAATGCCCAGGAAGAGATTGAG
CCAGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATCAACT
TGAAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTA
TTGCTGCAACCCATCACACCTCACCCAAAGGGATTGATTTGCCAGCTGAT
CATTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGC
TGAAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCACTGA
AAGGCGGAGCACCTGGACGGACTAGAGGGCTTCAAGTTTATACAGTTGAT
TCATTTTCAGATGGTTTAAATGGGGTCAATAAGTTGAGCTAATAGCTCCC
ATCCTCATCGACGCTAACGTGGTTTCTCATTTAAAATATTTCTCACAGCT
CAACTTATATAATTTAGAAAAAAAAAGAGCCTTGATGAAGCTCTACCTGT
GATTTCGTAAAAAA
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