FC876994
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876994 vs. ExPASy Swiss-Prot
Match: S39A1_MOUSE (Zinc transporter ZIP1 OS=Mus musculus GN=Slc39a1 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.712e-11 Identity = 64/261 (24.52%), Postives = 115/261 (44.06%), Query Frame = 3 Query: 69 LLLGTQFAGGVFLGTSMMHFLSDS----NETFKDL-TSKSYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGT-DGNPVFFRTS----SIGDT---------ILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLNGVGVI 794 L L + FAGGVFL T ++ L D +E + L + +P + + G+ L + + I +Q S EE +GT +G P + G T +L+ +L HSVFEG+A+G+ + A + LHK A+++ + LL+ + + A F+ +P+G+G+G A+ A + G + ++ G+A G F+Y+ ++ PQ + K + +L G ++ Sbjct: 69 LSLVSCFAGGVFLATCLLDLLPDYLAAIDEALEALHVTLQFPLQEFILAMGFFLVLVMEQITLAYKEQSSPPHP-----EETRALLGTVNGGPQHWHDGPGIPQAGGTPAAPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILAVSLSLRLLQSHLR--VQVVAGCGILFSCMTPLGIGLGAAL-AESAGPLHQLAQSVLEGMAAGTFLYITFLEIL-----PQELATSEQRILKVILLLAGFALL 316
BLAST of FC876994 vs. ExPASy Swiss-Prot
Match: IRT1_ARATH (Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.712e-11 Identity = 70/298 (23.49%), Postives = 129/298 (43.29%), Query Frame = 3 Query: 9 LVSTFAGGVSPYFYRWNESFL-------LLGTQFAGGVFLGTSMMHFLSDSNETFKDLTSK-----SYPFAFMLASAGYLLTMFGDCIINFVIK---------------QGSKKETRVDVEEEKSEEVGTDGNPVFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLAC--GVFIYVAINHLIAKGFK-PQNKCYFDAPFFKFLAVLNGVGVIAVVMIW 812 L+++ G +P F R N SFL + FA G+ LGT MH L DS E + + +PF+ LA L+T+ D + + G + + ++E+ S N R I ++L L + HSV G+++G ++ + + H++F + +G +L+ + + +F FA+++P G+ +GIA+ Q + + + + AC G+ IY+A+ L+A F P+ + F +A L G G ++++ W Sbjct: 52 LIASMIGVGAPLFSR-NVSFLQPDGNIFTIIKCFASGIILGTGFMHVLPDSFEMLSSICLEENPWHKFPFSGFLAMLSGLITLAIDSMATSLYTSKNAVGIMPHGHGHGHGPANDVTLPIKEDDS------SNAQLLRYRVI--AMVLELGIIVHSVVIGLSLGATSDTCTIKGLIAALCFHQMFEGMGLGGCILQ--AEYTNMKKFVMAFFFAVTTPFGIALGIALSTVYQDNSPKALITVGLLNACSAGLLIYMALVDLLAAEFMGPKLQGSIKMQFKCLIAALLGCGGMSIIAKW 338
BLAST of FC876994 vs. ExPASy Swiss-Prot
Match: S39A3_HUMAN (Zinc transporter ZIP3 OS=Homo sapiens GN=SLC39A3 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.814e-11 Identity = 64/252 (25.40%), Postives = 113/252 (44.84%), Query Frame = 3 Query: 57 NESFLLLGTQFAGGVFLGTSMMHFLSDSNETFKDLTS-----KSYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEE-EKSEEVGTD------------GNPVFFRTSSIGDTIL--------------LILALCFHSVFEGIAIGVSATKGEAWRNLWT-ISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAK 713 ++ L L F GGVFL T L E + + S YP A + G+ +T+F + +I K+ K + +D+E +VG+D G+ ++ G ++ L AL HSVFEG+A+G+ +GE +L+ +++H+ A+A+GI++ R P A + + P+G+G+G+ I+ + QG + GLA G F+++ ++AK Sbjct: 40 SKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTDYPLAETILLLGFFMTVFLEQLILTFRKE---KPSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPHGHGPSLSVQGLSRASPVRLLSLAFALSAHSVFEGLALGLQ-EEGEKVVSLFVGVAVHETLVAVALGISMAR--SAMPLRDAAKLAVTVSAMIPLGIGLGLGIE-SAQGVPGSVASVLLQGLAGGTFLFITFLEILAK 284
BLAST of FC876994 vs. ExPASy Swiss-Prot
Match: S39A3_BOVIN (Zinc transporter ZIP3 OS=Bos taurus GN=SLC39A3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.814e-11 Identity = 65/251 (25.90%), Postives = 111/251 (44.22%), Query Frame = 3 Query: 57 NESFLLLGTQFAGGVFLGTSMMHFLSDSNETFKDLT-----SKSYPFAFMLASAGYLLTMFGDCIINFVIKQ----------GSKKETRVDVEEEKSEEVGTDGNPVF--------------FRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWT-ISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISS--PIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAK 713 ++ L L F GGVFL T L E K++ S YP A + G+ +T+F + ++ K+ + + D E E G G+ ++ SS + L+ AL HSVFEG+A+G+ +GE +L+ +++H+ A+A+GI + R L A A +S+ P+G+ +G+ I+ + QG + + GLA G F++V ++AK Sbjct: 40 SKKILSLCNTFGGGVFLATCFNALLPAVREKLKEVLTLAHISTDYPLAETIMLLGFFMTVFLEQLVLTFRKERPAFIDLETFNASSDAGSDSEYESPFMGGPRGHALYAEPHGHSHGLSVQELSRSSPLRLLSLVFALSAHSVFEGLALGLQ-EEGEKVVSLFVGVAIHETLVAVALGINMAR----SAMALRDAAKLAVTVSAMIPLGISLGLGIE-SAQGMPSSVASVLLQGLAGGTFLFVTFFEILAK 284
BLAST of FC876994 vs. ExPASy Swiss-Prot
Match: ZIP7_ARATH (Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.497e-11 Identity = 70/275 (25.45%), Postives = 119/275 (43.27%), Query Frame = 3 Query: 90 AGGVFLGTSMMHFLSDSNETFKDLTSK--------SYPFA-FMLASAGYLLTMFGDCIINFVIKQGSKKE--------------TRVDVEE--------EKSEEVGTDGNPVFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLAC--GVFIYVAINHLIA-KGFKPQNKCYFDAPFFKFLAVLNGVGVIAVVMIW 812 A GV L T MH L DS F DLTSK +PFA F+ + L+ M + ++ SK+E T+ D++ EK E+V D R I +L L + HSV G+A+G S K + + H++F + +G ++L+ K T F F++++P G+ +G+AI + + + AC G+ IY+A+ +L+A + F P+ + ++A G ++++ W Sbjct: 97 ASGVILATGFMHVLPDS---FDDLTSKCLPEDPWQKFPFATFITMISALLVLMIESFAMCAYARRTSKREGEVVPLENGSNSVDTQNDIQTLENGSSYVEKQEKVNEDKTSELLRNKVIAQ--ILELGIVVHSVVIGLAMGASDNKCTVQSLIAALCFHQLFEGMGLGGSILQAQFKSKTNWTMV--FFFSVTTPFGIVLGMAIQKIYDETSPTALIVVGVLNACSAGLLIYMALVNLLAHEFFGPKIQGNIKLHVLGYVATFTGAAGMSLMAKW 364 The following BLAST results are available for this feature:
BLAST of FC876994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876994 ID=FC876994; Name=FC876994; organism=Citrus clementina; type=EST; length=824bpback to top |