FC876996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_RICAH (GTP-binding protein era homolog OS=Rickettsia akari (strain Hartford) GN=era PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.292e-14 Identity = 42/117 (35.90%), Postives = 73/117 (62.39%), Query Frame = 3 Query: 12 QYLMEQAVQRPW--SEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRL 356 +Y+ +A PW +ED +T + M+ I+ E+ RE+L ++ QE+PY + + W+DL+D S++I Q +I ++ S + I++GKNGSKI IG ++ ++ F VHL L V++ Sbjct: 163 EYITGKAQIAPWLYAEDDIT--DLPMRFIAAEITREQLFFNLQQELPYKLTVQTEKWEDLKDKSVKINQVIIVSRASYKTIILGKNGSKIREIGSKSRMQMERFFGFPVHLFLFVKV 277
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_BRUME (GTP-binding protein era homolog OS=Brucella melitensis GN=era PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.292e-14 Identity = 38/116 (32.76%), Postives = 67/116 (57.76%), Query Frame = 3 Query: 12 QYLMEQAVQRPWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 +YL E PW +S+ M+ ++ E+ RE+L +H+E+PY+ W++ +DGS+RIEQ + + SQ+KI++G G + IG A +E+ I ++ VH L V+++ Sbjct: 177 KYLAESVPNGPWYYPEDQISDMPMRQLAAEITREKLYLRLHEELPYASTVETERWEERKDGSVRIEQVIYVERESQKKIVLGHKGETVKAIGQAARKEISEILEQTVHQFLFVKVR 292
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_RICCN (GTP-binding protein era homolog OS=Rickettsia conorii GN=era PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.615e-14 Identity = 40/118 (33.90%), Postives = 74/118 (62.71%), Query Frame = 3 Query: 12 QYLMEQAVQRPW--SEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 +Y+ +A PW +ED +T + M+ I+ E+ RE+L ++ +E+PY + + W+DL+D S++I Q ++ ++ S + I++GKNGSKI IG ++ ++ F VHL L V+++ Sbjct: 209 EYITSKAKISPWLYAEDDIT--DLPMRFIAAEITREQLFLNLQKELPYKLTVQTEKWEDLKDKSVKINQVIVVSRESYKTIILGKNGSKIKEIGAKSRMQMERFFGFPVHLFLFVKVR 324
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERAL_MOUSE (GTP-binding protein era homolog OS=Mus musculus GN=Eral1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.615e-14 Identity = 39/118 (33.05%), Postives = 67/118 (56.78%), Query Frame = 3 Query: 3 TRTQYLMEQAVQRPWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRL 356 T QYL+ QA PW ++ + + I +RE+LL+++ +E+PY ++ + + W++ G L I+Q+L+ K S +IL+G+ G I +I E +L IF DV + L V+L Sbjct: 318 TLKQYLLTQAQPGPWEFHSGVLTSQTPEEICANKIREKLLEYLPEEVPYGVQQKTVIWEEGPSGELVIQQNLLVPKESHVRILIGQKGLLISQIAQEVGRDLMDIFHCDVLIRLSVKL 435
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_RICCK (GTP-binding protein era homolog OS=Rickettsia canadensis (strain McKiel) GN=era PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14 Identity = 39/118 (33.05%), Postives = 73/118 (61.86%), Query Frame = 3 Query: 12 QYLMEQAVQRPW--SEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 +Y+ +A PW +ED +T + M+ I+ E+ RE+L ++ QE+PY + + W++L+D S++I Q ++ + S + I++GKNGSKI IG ++ ++ F +HL L V+++ Sbjct: 165 EYITSKAKIAPWLYAEDDIT--DLPMRFIAAEITREQLFLNLQQELPYKLTVQTEKWEELKDKSVKINQVIVVARESYKTIILGKNGSKIKEIGAKSRMQMEQFFSCPIHLFLFVKVR 280
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_RICB8 (GTP-binding protein era homolog OS=Rickettsia bellii (strain OSU 85-389) GN=era PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14 Identity = 36/116 (31.03%), Postives = 72/116 (62.07%), Query Frame = 3 Query: 12 QYLMEQAVQRPWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 +Y+ +A PW + +++ M+ I+ E+ RE+L + QE+PY + + W++L+D S++I Q ++ ++ S + I++GKNGSKI +G ++ +++ F VHL L V+++ Sbjct: 165 EYITSKAKIAPWLYEEDDITDLPMRFIAAEITREQLFLGLQQELPYKLTVQTEKWEELKDKSVKINQIIVVSRESYKTIILGKNGSKIKELGAKSRMQMQQFFGFPVHLFLFVKVR 280
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_RHILO (GTP-binding protein era homolog OS=Rhizobium loti GN=era PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14 Identity = 40/115 (34.78%), Postives = 65/115 (56.52%), Query Frame = 3 Query: 15 YLMEQAVQRPWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 YL + PW +S+ M+ ++ E+ RE+L +HQE+PYS W++ DGS+RI+Q + + SQ+KI++G G I IG A E+ I ++ VHL L V+++ Sbjct: 177 YLAQALPAGPWYYPEDQISDLPMRQLAAEITREKLYLRLHQELPYSSHIETEKWEEKPDGSVRIDQTIYVERDSQKKIVLGHKGETIRAIGQAARMEIAGILEQKVHLFLFVKVR 291
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_RICBR (GTP-binding protein era homolog OS=Rickettsia bellii (strain RML369-C) GN=era PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.578e-14 Identity = 36/116 (31.03%), Postives = 72/116 (62.07%), Query Frame = 3 Query: 12 QYLMEQAVQRPWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 +Y+ +A PW + +++ M+ I+ E+ RE+L + QE+PY + + W++L+D S++I Q ++ ++ S + I++GKNGSKI +G ++ +++ F VHL L V+++ Sbjct: 165 EYITSKAKIAPWLYEEDDITDLPMRFIAAEITREQLFLGLQQELPYKLTVQTEKWEELKDKSVKINQIIVVSRESYKTIILGKNGSKIKELGAKSRMQMQQFFGFPVHLFLFVKVQ 280
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_BRAJA (GTP-binding protein era homolog OS=Bradyrhizobium japonicum GN=era PE=3 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 1.251e-13 Identity = 36/98 (36.73%), Postives = 62/98 (63.27%), Query Frame = 3 Query: 66 MSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 MS+ M++++ E+ RE++ +HQE+PY W++ +D S+RIEQ + + SQRKI++GK G+ I IG ++ +E+ I VHL L V+++ Sbjct: 191 MSDAPMRHLAAEITREKIYRKLHQELPYQSTVETDKWEERKDKSVRIEQTIFVERESQRKIVLGKGGATIKSIGADSRKEISEILGVPVHLFLFVKVR 288
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_RICFE (GTP-binding protein era homolog OS=Rickettsia felis GN=era PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.134e-13 Identity = 40/118 (33.90%), Postives = 73/118 (61.86%), Query Frame = 3 Query: 12 QYLMEQAVQRPW--SEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 +Y+ +A PW +ED +T + M+ I+ E+ RE+L ++ QE+PY + + W+ L+D S++I Q ++ ++ S + I++GKNGSKI IG ++ ++ F VHL L V+++ Sbjct: 163 EYITGKAKISPWLYAEDDIT--DLPMRFIAAEITREQLFFNLQQELPYKLTVQTEKWEVLKDKSIKINQVIVVSRESYKTIILGKNGSKIKEIGAKSRMQMERFFGFPVHLFLFVKVR 278 The following BLAST results are available for this feature:
BLAST of FC876996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876996 ID=FC876996; Name=FC876996; organism=Citrus clementina; type=EST; length=774bpback to top |