FC877010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877010 vs. ExPASy Swiss-Prot
Match: TDH_RHILO (L-threonine 3-dehydrogenase OS=Rhizobium loti GN=tdh PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11 Identity = 58/260 (22.31%), Postives = 107/260 (41.15%), Query Frame = 2 Query: 20 GEKDVTFKVTHCGICHSDLHLIK-NEWGNAIYPI--VPGHDIVGVLTEVGSKVSKFKVGDKV-GVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFSKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD--DMQAAMGTMDGI---IDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLEL 772 G DV K+ IC +D+H+ ++W P+ V GH+ VG + + G+ V+++KVG +V G G +V C C +C + C + G G + + + +H VV IP+ P + A G V++ L F D G ++ +G + VI+ + ++LG + + + D+ +G +G ++ A +I + + GK+ +LG E+ Sbjct: 28 GPNDVLIKIRKTAICGTDVHIYNWDQWAQKTVPVPMVTGHEFVGTVADFGAAVTEYKVGQRVSGEGHIV--CGHCRNCRAGRGHLCRNTLGV-------GVNRPGAFGEYLAIPQHNVVPIPDDVPDEIAAIFDPLGNAVHTALSF---DLVGEDVLVTGAGPIGIMGALVAQCVGARKVVITDINPVRLALAKKLGVQHVVDASKEKLRDVMPVLGMTEGFDVGLEMSGAAPAFRDMIDTMNNGGKIAILGIAPTGFEI 275
BLAST of FC877010 vs. ExPASy Swiss-Prot
Match: TDH_PECCP (L-threonine 3-dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=tdh PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11 Identity = 61/287 (21.25%), Postives = 117/287 (40.77%), Query Frame = 2 Query: 20 GEKDVTFKVTHCGICHSDLHLIK-NEWGNAIYPI--VPGHDIVGVLTEVGSKVSKFKVGDKV-GVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFSKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQ--DDMQAAMGTMDGI---IDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGVEGDSRYD 853 G D+ K+ IC +D+H+ +EW P+ V GH+ VG + +G +V+ F +GD+V G G + +C C +C + C I G G +++ +V + RIP+ + A G V++ L F D G + +G + VI+ + + + ++GA + ++ D+ +G +G ++ A ++ + G++ +LG P +P+ + G I G I G+ G ++ Sbjct: 24 GHNDIMIKIRKSAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEIVAIGQEVNGFHIGDRVSGEGHI--TCGYCRNCRAGRRHLCRNAIGV-------GVNRPGSFAEYLVIPAYNAFRIPDNISDELAAIFDPFGNAVHTALSF---DLVGEDVLIAGAGPIGMMAAAVCRHVGARNVVITDVNAYRLDLARKMGATRAVNVAEERLADVMIELGMTEGFDIGLEMSGAPSAFRAMLKAMNHGGRIAMLGIPHEPMSID-----WGEVIFKGLFIKGIYGREMFE 293
BLAST of FC877010 vs. ExPASy Swiss-Prot
Match: TDH_AGRRK (L-threonine 3-dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=tdh PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11 Identity = 61/260 (23.46%), Postives = 107/260 (41.15%), Query Frame = 2 Query: 20 GEKDVTFKVTHCGICHSDLHLIK-NEWGNAIYPI--VPGHDIVGVLTEVGSKVSKFKVGDKV-GVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFSKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD--DMQAAMGTMDGI---IDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLEL 772 G DV +V IC +D+H+ ++W P+ V GH+ G + E+GS V+K+ VG++V G G +V C C +C + C + G G + + + E VV IP+ P + A G V++ L F D G +K G + VI+ + +LG D + + ++ D+ ++G +G ++ A +I + + GK+ +LG E+ Sbjct: 28 GPNDVLIRVRKSAICGTDVHIWNWDQWAQKTIPVPMVVGHEFCGEIAEIGSAVTKYHVGERVSGEGHIV--CGKCRNCRAGRGHLCRNTLGV-------GVNRPGSFGEFVCIPESNVVPIPDDIPDEVAAIFDPFGNAVHTALSF---DLVGEDVLVTGAGPIGIMGAMVAKRSGARKVVITDINPNRLALAHKLGIDHVVDASKENLADVMKSIGMTEGFDVGLEMSGAAPAFRDMIDKMNNGGKIAILGIAPAGFEI 275 The following BLAST results are available for this feature:
BLAST of FC877010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 133
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877010 ID=FC877010; Name=FC877010; organism=Citrus clementina; type=EST; length=858bpback to top |