FC877010

Overview
NameFC877010
Unique NameFC877010
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length858
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10414 contig Ccv1_Contig10414:6..863. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877010 vs. ExPASy Swiss-Prot
Match: ADH2_KLUMA (Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus GN=ADH2 PE=3 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 4.158e-24
Identity = 71/249 (28.51%), Postives = 116/249 (46.59%), Query Frame = 2
Query:   29 DVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHDIVGVLTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFSKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDD-----MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 757
            ++   V + G+CH+DLH  K +W  +   P+V GH+  GV+  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP   +  +   HDG+     +     AD      IP G  L   AP+LCAG+TVY  L+   +                    +++KAMG +V  I     K+ E  + LG + F+      D     ++A  G   G+I+   +   +   I   +S G +VL+G P+
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVAMGDNVKGWKIGDLAGIKWLNGSCMNCEECELSNESNCPDADL--SGYTHDGS-----FQQYATADAVQAAHIPAGTDLAQVAPILCAGVTVYKALKTAEMKAGDWVAISGAAGGLGSLAVQYAKAMGFRVLGIDGGEGKE-ELFKSLGGEVFIDFTKSKDIVGEVIKATNGGAHGVINVSVSEKAIESSIEYCRSNGTVVLVGLPK 273          
BLAST of FC877010 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.158e-24
Identity = 70/248 (28.23%), Postives = 119/248 (47.98%), Query Frame = 2
Query:   29 DVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHDIVGVLTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFSKAMGVKVTVISTSPSKKSEAVERLGADSFL-----VSRDQDDMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 754
            ++   V + G+CH+DLH  K +W      P+V GH+  GV+  +G  V  +K+GD  G+  + GSC SC+ C +  E+ CP+  +  +   HDG+     +     AD     +IP G  L   AP+LCAG+TVY  L+   L                    +++KAMG +V  I     +K++  + LG + F+      +  ++ ++A  G   G+I+   +   +      ++S G +VL+G P
Sbjct:   35 ELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNCPEADL--SGYTHDGS-----FQQYATADAVQAAKIPVGTDLAEVAPVLCAGVTVYKALKSANLKAGDWVAISGAAGGLGSLAVQYAKAMGYRVLGIDAG-EEKAKLFKDLGGEYFIDFTKSKNIPEEVIEATKGGAHGVINVSVSEFAIEQSTNYVRSNGTVVLVGLP 274          
BLAST of FC877010 vs. ExPASy Swiss-Prot
Match: ADH_STAES (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=adh PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.210e-23
Identity = 69/268 (25.75%), Postives = 128/268 (47.76%), Query Frame = 2
Query:   41 KVTHCGICHSDLHLIKNEWGNAIYPIVPGHDIVGVLTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFSK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDDMQAAMGT-----MDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIG 826
            K  +CG+CH+DLH+   ++G+ +  +  GH+ +G + ++   V   KVGD+V +  M  +C +C+ C    E  C  V+       + G    G  ++ ++ D ++ V++PE     A + + CAG+T Y  ++  G++ PG                +++K  MG KV     +  K + A E LGAD+ + S + D ++          +D  + T  A  P    + ++K+  ++V +G P   ++L    L+     V GSL+G
Sbjct:   30 KTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGRVIKIADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVL-------NAGYTVDGAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIE-PGQWLGVFGVGGLGNLALQYAKNVMGAKVVAFDINDDKLNFAKE-LGADAIINSTNVDPIEEVNRLTNNKGLDATVITAVAKTPFNQAVDVVKAGARVVAVGLPVDKMDLDIPRLVLDGIEVVGSLVG 287          
BLAST of FC877010 vs. ExPASy Swiss-Prot
Match: ADH1_KLUMA (Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus GN=ADH1 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.210e-23
Identity = 68/248 (27.42%), Postives = 117/248 (47.18%), Query Frame = 2
Query:   29 DVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHDIVGVLTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFSKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDDM-----QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 754
            ++   V + G+CH+DLH  + +W  +   P+V GH+  G++  +G  V+ +++GD  G+  + GSC SC+ C +  E  CPK  +  +   HDG+     +     AD     RIP+   L   AP+LCAG+TVY  L+   +                    +++KAMG +V  I     +K++  + LG + F+      DM     +A  G    +I+   +   +   +   +S G +VL+G P
Sbjct:   33 ELLINVKYSGVCHTDLHAWQGDWPLDTKLPLVGGHEGAGIVVAMGENVTGWEIGDYAGIKWLNGSCMSCEECELSNEPNCPKADL--SGYTHDGS-----FQQYATADAVQAARIPKNVDLAEVAPILCAGVTVYKALKSAHIKAGDWVAISGACGGLGSLAIQYAKAMGYRVLGIDAG-DEKAKLFKELGGEYFIDFTKTKDMVAEVIEATNGVAHAVINVSVSEAAISTSVLYTRSNGTVVLVGLP 272          
BLAST of FC877010 vs. ExPASy Swiss-Prot
Match: ADH2_YEAST (Alcohol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=ADH2 PE=1 SV=3)

HSP 1 Score: 110.153 bits (274), Expect = 1.580e-23
Identity = 72/248 (29.03%), Postives = 116/248 (46.77%), Query Frame = 2
Query:   29 DVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHDIVGVLTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFSKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDDMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 754
            ++   V + G+CH+DLH    +W      P+V GH+  GV+  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP   +  +   HDG+     + +   AD      IP+G  L   AP+LCAGITVY  L+   L                    +++KAMG +V  I   P K+ E    LG + F+    + D+ +A+     G   GII+   +   +       ++ G +VL+G P
Sbjct:   33 ELLINVKYSGVCHTDLHAWHGDWPLPTKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL--SGYTHDGS-----FQEYATADAVQAAHIPQGTDLAEVAPILCAGITVYKALKSANLRAGHWAAISGAAGGLGSLAVQYAKAMGYRVLGIDGGPGKE-ELFTSLGGEVFIDFTKEKDIVSAVVKATNGGAHGIINVSVSEAAIEASTRYCRANGTVVLVGLP 272          
BLAST of FC877010 vs. ExPASy Swiss-Prot
Match: ADH4_KLULA (Alcohol dehydrogenase 4, mitochondrial OS=Kluyveromyces lactis GN=ADH4 PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.695e-23
Identity = 73/249 (29.32%), Postives = 119/249 (47.79%), Query Frame = 2
Query:   29 DVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHDIVGVLTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGM-XXXXXXXXXXXXXXXKFSKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDDM-----QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 754
            ++   V + G+CH+DLH  K +W   +  P+V GH+  G++   G  V  F++GD  G+  + GSC SC+ C    E+ C +  +  +   HDG+     +     AD     +IP+G  L   AP+LCAG+TVY  L+   L KPG                 +++KAMG++V  I     K+ E  ++ G + F+  R   DM     +A  G   G+I+   +   +      ++  G +VL+G P
Sbjct:   60 EILINVKYSGVCHTDLHAWKGDWPLPVKLPLVGGHEGAGIVVAKGENVKNFEIGDYAGIKWLNGSCMSCELCEQGYESNCLQADL--SGYTHDGS-----FQQYATADAVQAAQIPKGTDLAEIAPILCAGVTVYKALKTADL-KPGQWVAISGAAGGLGSLAVQYAKAMGLRVLGIDGGDGKE-ELFKQCGGEVFIDFRKSKDMVADIQEATNGGPHGVINVSVSEAAISMSTEYVRPTGVVVLVGLP 299          
BLAST of FC877010 vs. ExPASy Swiss-Prot
Match: ADH5_YEAST (Alcohol dehydrogenase 5 OS=Saccharomyces cerevisiae GN=ADH5 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.005e-23
Identity = 71/248 (28.63%), Postives = 119/248 (47.98%), Query Frame = 2
Query:   29 DVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHDIVGVLTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFSKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDD-----MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 754
            ++   V + G+CHSDLH    +W   + +P++ GH+  GV+ ++GS V  +KVGD  G+  + G+C SC+ C +  E+ CP +  T  +  HDGT     + +   AD      IP    L   AP+LCAGITVY  L+   +                    +++ AMG +V  I    +K+ +  E+LG + F+   ++ D     ++A  G   G+I+   +   +       +  G +VL+G P
Sbjct:   36 EILVHVKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLDGTGFT--HDGT-----FQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKALKRANVIPGQWVTISGACGGLGSLAIQYALAMGYRVIGIDGGNAKR-KLFEQLGGEIFIDFTEEKDIVGAIIKATNGGSHGVINVSVSEAAIEASTRYCRPNGTVVLVGMP 275          
BLAST of FC877010 vs. ExPASy Swiss-Prot
Match: ADH5_SACPS (Alcohol dehydrogenase 5 OS=Saccharomyces pastorianus GN=ADH5 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.005e-23
Identity = 71/248 (28.63%), Postives = 119/248 (47.98%), Query Frame = 2
Query:   29 DVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHDIVGVLTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFSKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDD-----MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 754
            ++   V + G+CHSDLH    +W   + +P++ GH+  GV+ ++GS V  +KVGD  G+  + G+C SC+ C +  E+ CP +  T  +  HDGT     + +   AD      IP    L   AP+LCAGITVY  L+   +                    +++ AMG +V  I    +K+ +  E+LG + F+   ++ D     ++A  G   G+I+   +   +       +  G +VL+G P
Sbjct:   36 EILVHVKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLDGTGFT--HDGT-----FQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKALKRANVIPGQWVTISGACGGLGSLAIQYALAMGYRVIGIDGGNAKR-KLFEQLGGEIFIDFTEEKDIVGAIIKATNGGSHGVINVSVSEAAIEASTRYCRPNGTVVLVGMP 275          
BLAST of FC877010 vs. ExPASy Swiss-Prot
Match: ADH2_CAEEL (Alcohol dehydrogenase 2 OS=Caenorhabditis elegans GN=sodh-2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.005e-23
Identity = 67/275 (24.36%), Postives = 130/275 (47.27%), Query Frame = 2
Query:   23 EKDVTFKVTHCGICHSDLHLIKNEWGNA-IYPIVPGHDIVGVLTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFSKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDDMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP-EKPLELPAFPLLTGRKIVGGSLIG 826
            E ++  K+ + GICHSDLH  + ++  A I P++ GH+  G +  +GSKV  + +GD+ G+  +  +C +C+ C    E  C  +        + G   +G + + +   +   +++     L A AP+LC G+T Y  L+   +    +               +++KAMG++  V++     K +    LGA+ F+ + D  D+ A +     G   G++   +A  P+   +  ++ +G +V +G P +  + L    L+     V GS++G
Sbjct:   34 ENELLVKIEYSGICHSDLHTWEGDFEYASICPLIGGHEGAGTVVTIGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLCDHI-------QNYGIDRHGTFQEYLTIRDIDAIKVSNDTNLAAAAPVLCGGVTAYKSLKATNVKPGQIVVLTGAGGGLGSFGIQYAKAMGMR--VVAVDHISKEDHCRNLGAEWFVDAFDTPDIVAHIRKLTNGGAHGVVSFAAAKKPMEYALEYVRKRGTVVFVGLPKDGTIPLDTLSLICNEITVKGSIVG 299          
BLAST of FC877010 vs. ExPASy Swiss-Prot
Match: ADH_STAAW (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=adh PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.338e-22
Identity = 72/278 (25.90%), Postives = 126/278 (45.32%), Query Frame = 2
Query:   11 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHDIVGVLTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFSK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDDMQAAMGT-----MDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIG 826
            RA    +   +  +CG+CH+DLH+   ++G+ +  +  GH+ +G + EV   V   K+GD+V +  M  SC  C+ C    E  C  V        + G    G  ++ ++    + V++PE     A + + CAG+T Y  ++   + KPG                +++K  MG K+     +  K + A E LGAD+ + S+D D +   M       +D  + T  A  P    + ++K+  ++V +G P   + L    L+     V GSL+G
Sbjct:   20 RALKPGEALVQTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSV-------KNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKE-LGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVAKTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVLDGIEVVGSLVG 287          
The following BLAST results are available for this feature:
BLAST of FC877010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
ADH2_KLUMA4.158e-2428.51Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus... [more]
ADH1_KLULA4.158e-2428.23Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]
ADH_STAES1.210e-2325.75Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH1_KLUMA1.210e-2327.42Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus... [more]
ADH2_YEAST1.580e-2329.03Alcohol dehydrogenase 2 OS=Saccharomyces cerevisia... [more]
ADH4_KLULA2.695e-2329.32Alcohol dehydrogenase 4, mitochondrial OS=Kluyvero... [more]
ADH5_YEAST6.005e-2328.63Alcohol dehydrogenase 5 OS=Saccharomyces cerevisia... [more]
ADH5_SACPS6.005e-2328.63Alcohol dehydrogenase 5 OS=Saccharomyces pastorian... [more]
ADH2_CAEEL6.005e-2324.36Alcohol dehydrogenase 2 OS=Caenorhabditis elegans ... [more]
ADH_STAAW1.338e-2225.90Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3CD08RM1 EHR Citrus clementina cDNA clone KN0AAN3CD08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877010 ID=FC877010; Name=FC877010; organism=Citrus clementina; type=EST; length=858bp
GCACGAGGGAAGAGCAACGGGAGAGAAGGATGTGACATTCAAAGTAACTC
ACTGTGGGATATGCCATTCAGATCTTCACTTGATCAAAAATGAATGGGGC
AATGCCATTTACCCAATCGTCCCCGGACATGATATTGTGGGCGTACTGAC
AGAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAGTGGGAG
TAGGATGCATGGTGGGATCATGCCGCTCTTGTGATAGCTGCGCCATTGAT
CTTGAGAACTACTGCCCCAAAGTTATAATGACCTATGCCAGCAAGTACCA
TGATGGAACCATCACATACGGAGGCTACTCTGACACTATGGTTGCCGATG
AGCACTTTGTGGTCCGTATTCCTGAAGGCGCACCACTTGACGCCACTGCC
CCTCTCCTCTGTGCTGGTATCACAGTCTACAGTCCGTTGAGATTCTATGG
ACTCGACAAGCCTGGTATGCATGTGGGTGTTGTCGGCTTGGGCGGTCTAG
GCCATGTCGCTGTCAAATTCTCAAAGGCTATGGGGGTTAAGGTGACTGTG
ATCAGTACCTCCCCTAGCAAGAAGAGTGAAGCCGTTGAACGTCTTGGCGC
TGATTCCTTTTTGGTCAGTCGTGATCAAGATGACATGCAAGCTGCCATGG
GCACAATGGATGGTATCATCGATACAGTATCTGCAGTTCACCCGCTAATG
CCGTTGATTGGACTGTTGAAATCTCAAGGAAAGCTTGTACTTCTTGGTGC
ACCCGAGAAGCCACTAGAGCTACCAGCTTTCCCCCTGCTCACGGGGAGGA
AGATAGTTGGTGGCAGTCTCATTGGGGGGGTAGAAGGAGACTCAAGATAT
GATTGATT
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