FC877019
|
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSJ (Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CAM1-1 PE=1 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 1.677e-56 Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 1
Query: 1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
GDGCITTKELGT +R + G P + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149 HSP 2 Score: 67.3958 bits (163), Expect = 6.246e-11 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
MA ++ D D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+ +M K
Sbjct: 1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSI (Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1-1 PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 1.677e-56 Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 1
Query: 1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
GDGCITTKELGT +R + G P + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149 HSP 2 Score: 67.3958 bits (163), Expect = 6.246e-11 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
MA ++ D D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+ +M K
Sbjct: 1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM1_DAUCA (Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 1.677e-56 Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 1
Query: 1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
GDGCITTKELGT +R + G P + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149 HSP 2 Score: 67.781 bits (164), Expect = 4.782e-11 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
MA ++ D D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+ +M K
Sbjct: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_CAPAN (Calmodulin OS=Capsicum annuum GN=CCM1 PE=2 SV=3) HSP 1 Score: 217.624 bits (553), Expect = 3.737e-56 Identity = 110/127 (86.61%), Postives = 115/127 (90.55%), Query Frame = 1
Query: 1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
GDGCITTKELGT +R + G P + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct: 24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149 HSP 2 Score: 67.781 bits (164), Expect = 4.782e-11 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
MA ++ D D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+ +M K
Sbjct: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM5_SOLTU (Calmodulin-5/6/7/8 OS=Solanum tuberosum GN=PCM5 PE=1 SV=3) HSP 1 Score: 217.624 bits (553), Expect = 3.737e-56 Identity = 110/127 (86.61%), Postives = 115/127 (90.55%), Query Frame = 1
Query: 1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
GDGCITTKELGT +R + G P + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct: 24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM3_ORYSI (Calmodulin-3 OS=Oryza sativa subsp. indica GN=CAM3 PE=2 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 3.737e-56 Identity = 110/127 (86.61%), Postives = 115/127 (90.55%), Query Frame = 1
Query: 1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
GDGCITTKELGT +R + G P + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct: 24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149 HSP 2 Score: 67.3958 bits (163), Expect = 6.246e-11 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
MA ++ D D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+ +M K
Sbjct: 1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM2_ORYSJ (Calmodulin-2 OS=Oryza sativa subsp. japonica GN=CAM2 PE=2 SV=3) HSP 1 Score: 217.624 bits (553), Expect = 3.737e-56 Identity = 110/127 (86.61%), Postives = 115/127 (90.55%), Query Frame = 1
Query: 1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
GDGCITTKELGT +R + G P + +INEVDADGNGTI FPEFLNLMA+KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM2_ORYSI (Calmodulin-2 OS=Oryza sativa subsp. indica GN=CAM2 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 3.737e-56 Identity = 110/127 (86.61%), Postives = 115/127 (90.55%), Query Frame = 1
Query: 1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
GDGCITTKELGT +R + G P + +INEVDADGNGTI FPEFLNLMA+KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM2_ARATH (Calmodulin-2/3/5 OS=Arabidopsis thaliana GN=CAM2 PE=1 SV=3) HSP 1 Score: 217.624 bits (553), Expect = 3.737e-56 Identity = 110/127 (86.61%), Postives = 115/127 (90.55%), Query Frame = 1
Query: 1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
GDGCITTKELGT +R + G P + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI+EADVDGDGQINYEEFVKVMMAK
Sbjct: 24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMAK 149 HSP 2 Score: 67.781 bits (164), Expect = 4.782e-11 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
MA ++ D D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+ +M K
Sbjct: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM6_ARATH (Calmodulin-6 OS=Arabidopsis thaliana GN=CAM6 PE=1 SV=2) HSP 1 Score: 217.238 bits (552), Expect = 4.881e-56 Identity = 110/127 (86.61%), Postives = 115/127 (90.55%), Query Frame = 1
Query: 1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
GDGCITTKELGT +R + G P + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL+DEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149 HSP 2 Score: 67.781 bits (164), Expect = 4.782e-11 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
MA ++ D D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+ +M K
Sbjct: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76 The following BLAST results are available for this feature:
BLAST of FC877019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877019 ID=FC877019; Name=FC877019; organism=Citrus clementina; type=EST; length=598bpback to top |