FC877019

Overview
NameFC877019
Unique NameFC877019
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length598
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig445 contig Ccv1_Contig445:153..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_WHEAT (Calmodulin OS=Triticum aestivum PE=1 SV=3)

HSP 1 Score: 216.853 bits (551), Expect = 6.374e-56
Identity = 110/127 (86.61%), Postives = 115/127 (90.55%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQ+GFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQDGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM3_PETHY (Calmodulin-related protein OS=Petunia hybrida GN=CAM53 PE=2 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 6.374e-56
Identity = 110/126 (87.30%), Postives = 114/126 (90.48%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 378
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148          

HSP 2 Score: 67.781 bits (164), Expect = 4.782e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1
Query:  151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_MAIZE (Calmodulin OS=Zea mays GN=CALM1 PE=2 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 8.325e-56
Identity = 110/127 (86.61%), Postives = 114/127 (89.76%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPE LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPELLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM3_ORYSJ (Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CAM3 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.087e-55
Identity = 109/127 (85.83%), Postives = 115/127 (90.55%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV+EMIREADVDGDGQINY+EFVKVMMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYDEFVKVMMAK 149          

HSP 2 Score: 67.3958 bits (163), Expect = 6.246e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1
Query:  151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM1_ARATH (Calmodulin-1/4 OS=Arabidopsis thaliana GN=CAM1 PE=1 SV=3)

HSP 1 Score: 215.698 bits (548), Expect = 1.420e-55
Identity = 108/127 (85.04%), Postives = 115/127 (90.55%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMA+KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV+EMIREADVDGDGQINYEEFVK+MMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEEFVKIMMAK 149          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_MALDO (Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 2.422e-55
Identity = 110/127 (86.61%), Postives = 114/127 (89.76%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPE LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEPLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM2_SOLTU (Calmodulin-2/4 (Fragment) OS=Solanum tuberosum GN=PCM2 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 9.204e-55
Identity = 108/125 (86.40%), Postives = 113/125 (90.40%), Query Frame = 1
Query:    7 GCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GCITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:    1 GCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 124          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_FAGSY (Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3)

HSP 1 Score: 210.305 bits (534), Expect = 5.966e-54
Identity = 109/127 (85.83%), Postives = 113/127 (88.98%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVD DGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD EVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDRDGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD-EVDEMIREADVDGDGQINYEEFVKVMMAK 148          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_SOLLC (Calmodulin OS=Solanum lycopersicum GN=CALM1 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 2.267e-53
Identity = 103/127 (81.10%), Postives = 114/127 (89.76%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +I+EVDAD NGTI FPEFLNLMARKMKDTDSEEELKEAF+VFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M+AK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMISEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVRMMLAK 149          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_MOUSC (Calmodulin OS=Mougeotia scalaris PE=2 SV=3)

HSP 1 Score: 207.608 bits (527), Expect = 3.867e-53
Identity = 104/127 (81.89%), Postives = 113/127 (88.98%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDG ITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAF+VFDKDQNG+ISAA+ RHVMTNLGEKLTDEEVDEMIREADVDGDGQ+NYEEFVK+MMAK
Sbjct:   24 GDGSITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADWRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVKMMMAK 149          
The following BLAST results are available for this feature:
BLAST of FC877019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 381
Match NameE-valueIdentityDescription
CALM_WHEAT6.374e-5686.61Calmodulin OS=Triticum aestivum PE=1 SV=3[more]
CALM3_PETHY6.374e-5687.30Calmodulin-related protein OS=Petunia hybrida GN=C... [more]
CALM_MAIZE8.325e-5686.61Calmodulin OS=Zea mays GN=CALM1 PE=2 SV=2[more]
CALM3_ORYSJ1.087e-5585.83Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM1_ARATH1.420e-5585.04Calmodulin-1/4 OS=Arabidopsis thaliana GN=CAM1 PE=... [more]
CALM_MALDO2.422e-5586.61Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2[more]
CALM2_SOLTU9.204e-5586.40Calmodulin-2/4 (Fragment) OS=Solanum tuberosum GN=... [more]
CALM_FAGSY5.966e-5485.83Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3[more]
CALM_SOLLC2.267e-5381.10Calmodulin OS=Solanum lycopersicum GN=CALM1 PE=2 S... [more]
CALM_MOUSC3.867e-5381.89Calmodulin OS=Mougeotia scalaris PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1DH11RM1 EHR Citrus clementina cDNA clone KN0AAN1DH11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877019 ID=FC877019; Name=FC877019; organism=Citrus clementina; type=EST; length=598bp
GGCGACGGTTGCATTACCACCAAGGAGCTTGGCACTGCTGTGAGGTGCAC
TGCGGGCGTAACCCCACTGAGGCGGAGCTCCCGGACAGTGATCAATGAAG
TGGATGCTGATGGTAATGGAACTATTGGTTTTCCTGAATTCCTAAACCTC
ATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGCTGAAAGAGGC
CTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCAGCTGCTGAGC
TGCGCCATGTGATGACAAACCTAGGAGAGAAACTTACTGATGAAGAAGTT
GATGAGATGATAAGGGAAGCTGATGTTGATGGTGATGGCCAGATAAATTA
TGAGGAATTTGTCAAGGTTATGATGGCCAAGTAATGACCCCAACCCACCA
ATACTTATAAAATGGGTTGACTAAATTATAAAGGGATTCCTAGTTTTCTC
TTTTACAATTTTTAATTTGATAGTCATGAGGGTCAGGCTAAAGGAAGCAA
TGGTCTTTTAATGGTGATGGGCCTGATGGTGTAGGACAAATGTTGTCTCC
CTCGTCAATATGTCTTGTGACTCGCAACACTTTTCGGTTTTTATTATT
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