FC877020

Overview
NameFC877020
Unique NameFC877020
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSJ (Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CAM1-1 PE=1 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 6.390e-80
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLTDDQI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSI (Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1-1 PE=2 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 6.390e-80
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLTDDQI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_MEDSA (Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2)

HSP 1 Score: 296.59 bits (758), Expect = 8.346e-80
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLTD+QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_HELAN (Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3)

HSP 1 Score: 296.59 bits (758), Expect = 8.346e-80
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLT+DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM6_ARATH (Calmodulin-6 OS=Arabidopsis thaliana GN=CAM6 PE=1 SV=2)

HSP 1 Score: 296.59 bits (758), Expect = 8.346e-80
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL+DEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM3_PETHY (Calmodulin-related protein OS=Petunia hybrida GN=CAM53 PE=2 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 1.090e-79
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 458
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148

HSP 2 Score: 70.8626 bits (172), Expect = 7.448e-12
Identity = 39/101 (38.61%), Postives = 55/101 (54.46%), Query Frame = 3 
Query:    9 RKMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG 311
            RKM D    D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M    +    EE  +       +  NG
Sbjct:   75 RKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMANRRRRRIEESKRSVNSNISRSNNG 172

HSP 3 Score: 67.781 bits (164), Expect = 6.305e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 3 
Query:  231 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM3_ORYSI (Calmodulin-3 OS=Oryza sativa subsp. indica GN=CAM3 PE=2 SV=2)

HSP 1 Score: 295.819 bits (756), Expect = 1.424e-79
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLTDDQI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM5_SOLTU (Calmodulin-5/6/7/8 OS=Solanum tuberosum GN=PCM5 PE=1 SV=3)

HSP 1 Score: 295.434 bits (755), Expect = 1.859e-79
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLT+DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:    1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_MALDO (Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2)

HSP 1 Score: 294.278 bits (752), Expect = 4.142e-79
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:    1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEPLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM3_ORYSJ (Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CAM3 PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 4.142e-79
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLTDDQI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV+EMIREADVDGDGQINY+EFVKVMMAK
Sbjct:    1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYDEFVKVMMAK 149
The following BLAST results are available for this feature:
BLAST of FC877020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
CALM1_ORYSJ6.390e-8099.33Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM1_ORYSI6.390e-8099.33Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1... [more]
CALM_MEDSA8.346e-8099.33Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2[more]
CALM_HELAN8.346e-8099.33Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3[more]
CALM6_ARATH8.346e-8099.33Calmodulin-6 OS=Arabidopsis thaliana GN=CAM6 PE=1 ... [more]
CALM3_PETHY1.090e-79100.00Calmodulin-related protein OS=Petunia hybrida GN=C... [more]
CALM3_ORYSI1.424e-7998.66Calmodulin-3 OS=Oryza sativa subsp. indica GN=CAM3... [more]
CALM5_SOLTU1.859e-7998.66Calmodulin-5/6/7/8 OS=Solanum tuberosum GN=PCM5 PE... [more]
CALM_MALDO4.142e-7999.33Calmodulin OS=Malus domestica GN=CAM PE=3 SV=2[more]
CALM3_ORYSJ4.142e-7997.99Calmodulin-3 OS=Oryza sativa subsp. japonica GN=CA... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1DH12RM1 EHR Citrus clementina cDNA clone KN0AAN1DH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877020 ID=FC877020; Name=FC877020; organism=Citrus clementina; type=EST; length=692bp
GCACGAGGAGAAAAATGGCGGATCAGCTCACGGACGATCAGATCTCTGAG
TTCAAAGAGGCCTTCAGCTTGTTTGACAAGGATGGCGACGGTTGCATTAC
CACCAAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTG
AGGCTGAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGA
ACTATTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGA
TACCGACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGG
ATCAGAATGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAAC
CTAGGAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGC
TGATGTTGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTA
TGATGGCCAAGTAATGACCCCAACCCACCAATACTTATAAAATGGGTTGA
CTAAATTATAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTAATTTGA
TAGTCATGAGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAATGGTGATGG
GCCTGATGGTGTAGGAAGAATGTTGTCTCCCTCGTCAATATGTCTTGTGA
CTCGCAAAACTTTTCGGTTTTTATTATTTTAGTTGTTCTGCT
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