FC877020

Overview
NameFC877020
Unique NameFC877020
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_HETTR (Calmodulin OS=Heterocapsa triquetra PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 8.938e-74
Identity = 137/149 (91.95%), Postives = 146/149 (97.99%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVD+DGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDSDGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_EPIAK (Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3)

HSP 1 Score: 276.174 bits (705), Expect = 1.167e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQIMTAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_XENLA (Calmodulin OS=Xenopus laevis GN=calm1 PE=1 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 1.991e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_TORCA (Calmodulin OS=Torpedo californica PE=1 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 1.991e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_SHEEP (Calmodulin OS=Ovis aries GN=CALM2 PE=2 SV=3)

HSP 1 Score: 275.404 bits (703), Expect = 1.991e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_RAT (Calmodulin OS=Rattus norvegicus GN=Calm1 PE=1 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 1.991e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_RABIT (Calmodulin OS=Oryctolagus cuniculus GN=CALM PE=1 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 1.991e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_PONAB (Calmodulin OS=Pongo abelii GN=CALM PE=2 SV=3)

HSP 1 Score: 275.404 bits (703), Expect = 1.991e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_PERFV (Calmodulin OS=Perca flavescens GN=calm PE=2 SV=3)

HSP 1 Score: 275.404 bits (703), Expect = 1.991e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_ONCSP (Calmodulin OS=Oncorhynchus sp. GN=calm PE=1 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 1.991e-73
Identity = 134/149 (89.93%), Postives = 145/149 (97.32%), Query Frame = 3 
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
The following BLAST results are available for this feature:
BLAST of FC877020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
CALM_HETTR8.938e-7491.95Calmodulin OS=Heterocapsa triquetra PE=2 SV=1[more]
CALM_EPIAK1.167e-7389.93Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3[more]
CALM_XENLA1.991e-7389.93Calmodulin OS=Xenopus laevis GN=calm1 PE=1 SV=2[more]
CALM_TORCA1.991e-7389.93Calmodulin OS=Torpedo californica PE=1 SV=2[more]
CALM_SHEEP1.991e-7389.93Calmodulin OS=Ovis aries GN=CALM2 PE=2 SV=3[more]
CALM_RAT1.991e-7389.93Calmodulin OS=Rattus norvegicus GN=Calm1 PE=1 SV=2[more]
CALM_RABIT1.991e-7389.93Calmodulin OS=Oryctolagus cuniculus GN=CALM PE=1 S... [more]
CALM_PONAB1.991e-7389.93Calmodulin OS=Pongo abelii GN=CALM PE=2 SV=3[more]
CALM_PERFV1.991e-7389.93Calmodulin OS=Perca flavescens GN=calm PE=2 SV=3[more]
CALM_ONCSP1.991e-7389.93Calmodulin OS=Oncorhynchus sp. GN=calm PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1DH12RM1 EHR Citrus clementina cDNA clone KN0AAN1DH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877020 ID=FC877020; Name=FC877020; organism=Citrus clementina; type=EST; length=692bp
GCACGAGGAGAAAAATGGCGGATCAGCTCACGGACGATCAGATCTCTGAG
TTCAAAGAGGCCTTCAGCTTGTTTGACAAGGATGGCGACGGTTGCATTAC
CACCAAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTG
AGGCTGAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGA
ACTATTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGA
TACCGACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGG
ATCAGAATGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAAC
CTAGGAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGC
TGATGTTGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTA
TGATGGCCAAGTAATGACCCCAACCCACCAATACTTATAAAATGGGTTGA
CTAAATTATAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTAATTTGA
TAGTCATGAGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAATGGTGATGG
GCCTGATGGTGTAGGAAGAATGTTGTCTCCCTCGTCAATATGTCTTGTGA
CTCGCAAAACTTTTCGGTTTTTATTATTTTAGTTGTTCTGCT
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