FC877020

Overview
NameFC877020
Unique NameFC877020
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALMA_ARBPU (Calmodulin-alpha (Fragment) OS=Arbacia punctulata PE=2 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 3.179e-71
Identity = 130/142 (91.55%), Postives = 139/142 (97.89%), Query Frame = 3
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 440
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEF
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142          
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_HALOK (Calmodulin OS=Halichondria okadai PE=2 SV=3)

HSP 1 Score: 267.7 bits (683), Expect = 4.152e-71
Identity = 130/149 (87.25%), Postives = 142/149 (95.30%), Query Frame = 3
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            M D L+++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    1 MTDALSEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTSK 149          
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_PHYPO (Calmodulin OS=Physarum polycephalum PE=2 SV=3)

HSP 1 Score: 266.929 bits (681), Expect = 7.082e-71
Identity = 129/149 (86.58%), Postives = 143/149 (95.97%), Query Frame = 3
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            M D LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKM DTD+EEE++EAF+VFDKD NGFISAAELRHVMTNLGEKL+DEEVDEMIREADVDGDGQ+NY+EFVK+M++K
Sbjct:    1 MVDSLTEEQIAEFKEAFSLFDKDGDGNITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMADTDTEEEIREAFKVFDKDGNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQVNYDEFVKMMLSK 149          
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_PLAFA (Calmodulin OS=Plasmodium falciparum PE=3 SV=4)

HSP 1 Score: 265.774 bits (678), Expect = 1.578e-70
Identity = 130/149 (87.25%), Postives = 143/149 (95.97%), Query Frame = 3
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MAD+LT++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE+D DGNGTIDFPEFL LMARK+KDTD+EEEL EAFRVFD+D +G+ISA ELRHVMTNLGEKLT+EEVDEMIREAD+DGDGQINYEEFVK+M+AK
Sbjct:    1 MADKLTEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMMIAK 149          
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_PLAF7 (Calmodulin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0323 PE=3 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 1.578e-70
Identity = 130/149 (87.25%), Postives = 143/149 (95.97%), Query Frame = 3
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MAD+LT++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE+D DGNGTIDFPEFL LMARK+KDTD+EEEL EAFRVFD+D +G+ISA ELRHVMTNLGEKLT+EEVDEMIREAD+DGDGQINYEEFVK+M+AK
Sbjct:    1 MADKLTEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMMIAK 149          
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_BLAEM (Calmodulin OS=Blastocladiella emersonii GN=CMD1 PE=3 SV=3)

HSP 1 Score: 265.388 bits (677), Expect = 2.060e-70
Identity = 130/149 (87.25%), Postives = 144/149 (96.64%), Query Frame = 3
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAEL  MINEVDADGNGTIDFPEFL +MARKMKD+DSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKL+++EV+EMIREADVDGDGQINYEEFVK+MM+K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELLVMINEVDADGNGTIDFPEFLTMMARKMKDSDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLSEDEVEEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_PARTE (Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 SV=3)

HSP 1 Score: 262.692 bits (670), Expect = 1.336e-69
Identity = 128/149 (85.91%), Postives = 143/149 (95.97%), Query Frame = 3
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MA+QLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMK+ DSEEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTD+EVDEMIREAD+DGDG INYEEFV++M++K
Sbjct:    1 MAEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVSK 149          
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALL3_HUMAN (Calmodulin-like protein 3 OS=Homo sapiens GN=CALML3 PE=1 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 1.336e-69
Identity = 122/149 (81.88%), Postives = 143/149 (95.97%), Query Frame = 3
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MADQLT++Q++EFKEAFSLFDKDGDGCITT+ELGTVMRSLGQNPTEAEL+DM++E+D DGNGT+DFPEFL +MARKMKDTD+EEE++EAFRVFDKD NGF+SAAELRHVMT LGEKL+DEEVDEMIR AD DGDGQ+NYEEFV+V+++K
Sbjct:    1 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK 149          
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALL3_RAT (Calmodulin-like protein 3 OS=Rattus norvegicus GN=Calml3 PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 3.886e-69
Identity = 122/149 (81.88%), Postives = 142/149 (95.30%), Query Frame = 3
Query:   15 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 461
            MA+QLT++QI+EFKEAFSLFDKDGDGCITT+ELGTVMRSLGQNPTEAELQDM+NE+D DGNGT+DFPEFL +M+RKMKDTDSEEE++EAFRVFDKD NGF+SAAELRHVMT LGEKL+DEEVDEMI+ AD DGDGQ+NYEEFV ++++K
Sbjct:    1 MANQLTEEQIAEFKEAFSLFDKDGDGCITTQELGTVMRSLGQNPTEAELQDMVNEIDKDGNGTVDFPEFLTMMSRKMKDTDSEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIQAADTDGDGQVNYEEFVHMLVSK 149          
BLAST of FC877020 vs. ExPASy Swiss-Prot
Match: CALM_CHLRE (Calmodulin OS=Chlamydomonas reinhardtii PE=1 SV=2)

HSP 1 Score: 258.07 bits (658), Expect = 3.290e-68
Identity = 125/144 (86.81%), Postives = 140/144 (97.22%), Query Frame = 3
Query:   21 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 452
            +QLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMI+EVDADGNGTIDFPEFL LMARKMK+TD E+EL+EAF+VFDKD NGFISAAELRHVMTNLGEKL++EEVDEMIREADVDGDGQ+NYEEFV++M
Sbjct:    6 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMISEVDADGNGTIDFPEFLMLMARKMKETDHEDELREAFKVFDKDGNGFISAAELRHVMTNLGEKLSEEEVDEMIREADVDGDGQVNYEEFVRMM 149          

HSP 2 Score: 68.1662 bits (165), Expect = 4.828e-11
Identity = 34/81 (41.98%), Postives = 50/81 (61.73%), Query Frame = 3
Query:    9 RKMADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKD 251
            RKM +    D   E +EAF +FDKDG+G I+  EL  VM +LG+  +E E+ +MI E D DG+G +++ EF+ +M     D
Sbjct:   78 RKMKET---DHEDELREAFKVFDKDGNGFISAAELRHVMTNLGEKLSEEEVDEMIREADVDGDGQVNYEEFVRMMTSGATD 155          
The following BLAST results are available for this feature:
BLAST of FC877020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
CALMA_ARBPU3.179e-7191.55Calmodulin-alpha (Fragment) OS=Arbacia punctulata ... [more]
CALM_HALOK4.152e-7187.25Calmodulin OS=Halichondria okadai PE=2 SV=3[more]
CALM_PHYPO7.082e-7186.58Calmodulin OS=Physarum polycephalum PE=2 SV=3[more]
CALM_PLAFA1.578e-7087.25Calmodulin OS=Plasmodium falciparum PE=3 SV=4[more]
CALM_PLAF71.578e-7087.25Calmodulin OS=Plasmodium falciparum (isolate 3D7) ... [more]
CALM_BLAEM2.060e-7087.25Calmodulin OS=Blastocladiella emersonii GN=CMD1 PE... [more]
CALM_PARTE1.336e-6985.91Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 S... [more]
CALL3_HUMAN1.336e-6981.88Calmodulin-like protein 3 OS=Homo sapiens GN=CALML... [more]
CALL3_RAT3.886e-6981.88Calmodulin-like protein 3 OS=Rattus norvegicus GN=... [more]
CALM_CHLRE3.290e-6886.81Calmodulin OS=Chlamydomonas reinhardtii PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1DH12RM1 EHR Citrus clementina cDNA clone KN0AAN1DH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877020 ID=FC877020; Name=FC877020; organism=Citrus clementina; type=EST; length=692bp
GCACGAGGAGAAAAATGGCGGATCAGCTCACGGACGATCAGATCTCTGAG
TTCAAAGAGGCCTTCAGCTTGTTTGACAAGGATGGCGACGGTTGCATTAC
CACCAAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTG
AGGCTGAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGTAATGGA
ACTATTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGA
TACCGACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGG
ATCAGAATGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAAC
CTAGGAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGC
TGATGTTGATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTA
TGATGGCCAAGTAATGACCCCAACCCACCAATACTTATAAAATGGGTTGA
CTAAATTATAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTAATTTGA
TAGTCATGAGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAATGGTGATGG
GCCTGATGGTGTAGGAAGAATGTTGTCTCCCTCGTCAATATGTCTTGTGA
CTCGCAAAACTTTTCGGTTTTTATTATTTTAGTTGTTCTGCT
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