FC877028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877028 vs. ExPASy Swiss-Prot
Match: SECY_METTH (Preprotein translocase subunit secY OS=Methanobacterium thermoautotrophicum GN=secY PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.666e-36 Identity = 91/263 (34.60%), Postives = 139/263 (52.85%), Query Frame = 1 Query: 16 GAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVR----SKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 786 G + +LL T Q+ F LP +LA + VFL+VVY + +V +P+ + +RG G YP++ Y SNMP+IL SAL+ N+ ++ + + +LG + V GLAY +TAP S+ + +PF +FY V + C LF+ W+E+S R VA+QL + M +PG R S +K L RYIPT GG +G L +AD G++G GTG+LL V I+Y+ +E +E+ ++ Sbjct: 205 GRITGFLYLLFTGQSP------DFQYYVLP----VLALIAVFLVVVYAESMRVEIPISMGGGKRLSRGAVGKYPLRFIYASNMPVILTSALLLNVQLLANVFQK-----LGYPILGTVSNGQ------AVDGLAYLLTAPRSIDALILDPFRVVFYAVVFIGLCVLFAWLWVEISNIGPRHVARQLYQMGMQIPGFRSSRGQFEKILKRYIPTITILGGAFVGLLAFVADLTGSLGGGTGVLLTVGIVYRLYEEIAQEQLMDM 446
BLAST of FC877028 vs. ExPASy Swiss-Prot
Match: YGMH_SCHPO (Uncharacterized protein C19G7.17 OS=Schizosaccharomyces pombe GN=SPBC19G7.17 PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 3.044e-30 Identity = 72/251 (28.69%), Postives = 129/251 (51.39%), Query Frame = 1 Query: 10 FEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESE-YSGHSIP-VGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFE 756 ++GA++ L + +NK +LR +R + L + VF +Y ++ +P+RS RG + +P+KL YTS +P+I +++S+L + LY + LL ++ + ++ H + VGGL Y++ P L++ +P H + Y + ++ FS W+ + RDV KE Q+V+ G+R++ + KEL + IP AA + L+V+A A G G+L+A ++Y FE Sbjct: 213 YQGALVGFAFNLFSFKNKFSSLRSILFRSEGLSFVQFLVCIAVFATFMYTLNIRIDVPIRSSRVRGVRQNFPLKLLYTSVIPLIYFYSILSHLLVFAYALYSLCPNSLITRLLVQYSPIDTFAEHKLQLVGGLVYFLYPPLGLSEALLHPVHTVIYTITLICITIYFSLLWMNATAGGPRDVLLFFKENQLVIAGYREATMLKELEKIIPIAAKLSAFFVSILSVIAGIF-ASTFGVGVLIASALVYASFE 462
BLAST of FC877028 vs. ExPASy Swiss-Prot
Match: SECY_HALVO (Preprotein translocase subunit secY OS=Halobacterium volcanii GN=secY PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.191e-30 Identity = 78/237 (32.91%), Postives = 128/237 (54.01%), Query Frame = 1 Query: 118 LLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLAD-------MAANP----FHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG-SGTGILLAVTIIYQYFETFEKERASEL 786 L+ T+L+F IVVY + +V +P+ +G +G +P+KL Y S +P+IL AL +N+ F+ + L + G + W SG GGL YY+ S +D +A+P L L+FM+ A+F+ W+E +G + A+Q++ M +PG R + +++ + RYIP GG +G L V+A+ +G IG SGTG+LL V+I Y+ +E +E+ E+ Sbjct: 249 LITTLLIFGIVVYAESVRVEIPLSHARVKGARGRFPVKLIYASVLPMILVRALQANIQFLGRFLNSSWVG------MPAWLGQYTSGQ--VTGGLLYYLAPIQSRSDWMWFLGLTSADPLDIAIRVLIDLIFMIVGGAVFAIFWVETTGMGPKSTAQQIQNSGMQIPGFRRNPQVIERVMERYIPQVTVIGGALVGLLAVMANMLGTIGASGTGLLLTVSITYKLYEEIAEEQLMEM 477
BLAST of FC877028 vs. ExPASy Swiss-Prot
Match: SECY_ARCFU (Preprotein translocase subunit secY OS=Archaeoglobus fulgidus GN=secY PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.191e-30 Identity = 84/247 (34.01%), Postives = 134/247 (54.25%), Query Frame = 1 Query: 109 ITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLAD------------MAANP-----FHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG--SGTGILLAVTIIYQYFETFEKERASEL 786 I L+ T + L+VV+F+G +V +P+ ARG +G +PIKL Y S +P+I AL +N+ + Q+L+ + V + G++ + V GL +++ +S D AA P H L + ++ +F+ W+E SG AR VA Q+ + M +PG R S L++ L+RYIP GG IG LT++A+ +G IG SGTG+LLAV+I Y+++E KE+ +E+ Sbjct: 246 ILALITTAAIILLVVFFEGTRVEIPLAHAVARGARGRFPIKLIYASVLPMIFVRALQANVVALGQVLHAR-----GVTIFGEFVNGK------AVSGLMFFLQPVSSPYDWIPSLVKSQGAAFAAIPDWMIYLHLLIDALILVVGGIIFAWFWVETSGMDARTVASQIAKSGMQVPGFRKSPQVLERVLSRYIPKVTILGGAIIGILTLVANMLGTIGNVSGTGLLLAVSIAYRFYEDLAKEQLTEM 481
BLAST of FC877028 vs. ExPASy Swiss-Prot
Match: SSH1_YEAST (Sec sixty-one protein homolog OS=Saccharomyces cerevisiae GN=SSH1 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.577e-29 Identity = 74/245 (30.20%), Postives = 126/245 (51.43%), Query Frame = 1 Query: 13 EGAVIALFHLLITKQNK-VGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFIS----QLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAV 732 +GA+I L L +K +G + AF R LPN+T + + + +IV Y Q +V LP+RS ARG YPIKL YT + ++ ++ ++ + QL+ + + ++G + E+ + ++P L+ + + P + Y F+L F+ W +SGSSARDVA + K+Q + + G R+ N+ KELN+ IP AA G + +TV+ + +G G GI++ + Sbjct: 214 QGALINLIQGLRSKHKTFIGGIISAFNRDYLPNLTTTIIVLAIAIIVCYLQSVRVELPIRSTRARGTNNVYPIKLLYTGCLSVLFSYTILFYIHIFAFVLIQLVAKNEPTHIICKIMGHY-ENANNLLAVPTFPLSLLAPPTSFFKGVTQQPLTFITYSAFILVTGIWFADKWQAISGSSARDVALEFKDQGITLMGRREQNVAKELNKVIPIAAVTGASVLSLITVIGESLGLKGKAAGIVVGI 457
BLAST of FC877028 vs. ExPASy Swiss-Prot
Match: SECY_HALMA (Preprotein translocase subunit secY OS=Haloarcula marismortui GN=secY PE=3 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 7.496e-29 Identity = 85/278 (30.58%), Postives = 136/278 (48.92%), Query Frame = 1 Query: 7 GFEGAVIALFHLLITKQNKVGALREAFYRQNL---PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADM------AANPFHALFY-----LVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG--SGTGILLAVTIIYQYFETFEKERASEL 786 G +I ++L IT + G + A Q + + L TVL+F +VVY + +V +P+ + +G +G +P+KL Y S +P+IL AL +N+ F+ ++L + LG + + P GGL Y++ S D A P + L ML A+F+ W+E + AKQ+ M +PG R + ++K L RYIP GG +G L V+A+ +G IG SGTG+LL V+I Y+ +E +E+ E+ Sbjct: 209 GNSEGIIYTWYLFITGERGTGPVLAADGLQTVLLQGELLGLFTTVLIFAVVVYAESVRVEIPLSNARVKGARGRFPVKLIYASVLPMILVRALQANIQFLGRILNAQLGS--MPAFLGTYANGQ------PTGGLFYFLAPIQSRGDWMWWLEGTAQPVWQILTRVGIDLFVMLVGGAVFAVFWVETTDMGPEATAKQIHNSGMQIPGFRQNVGVIEKVLERYIPQVTVIGGALVGLLAVMANMLGTIGGVSGTGLLLTVSITYKLYEEIAEEQLMEM 478
BLAST of FC877028 vs. ExPASy Swiss-Prot
Match: SECY_HALSA (Preprotein translocase subunit secY OS=Halobacterium salinarium GN=secY PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.846e-27 Identity = 75/241 (31.12%), Postives = 125/241 (51.87%), Query Frame = 1 Query: 109 ITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPAS-------LADMAANPFHALFY----LVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG--SGTGILLAVTIIYQYFETFEKERASEL 786 I LL T+ ++++VVY + +V +P+ +G +G +P+KL Y S +P+IL AL +N+ F+ Q+L N + + W Y G+ GGL YY+ S + A + L L FM+ A+F+ W+E + A+Q++ M +PG R + ++K + RYIP GG +G L V+A+ +G IG SGTG+LL ++I Y+ +E +E+ E+ Sbjct: 246 ILGLLTTLFIYVVVVYAESVRVEIPLSHARVKGARGRFPVKLIYASVLPMILVRALQANIQFLGQIL------NSTLASMPTWL-GVYGGNGQVTGGLFYYLAPIYSPNAWMWWTSGATAARWQVLIRIAIDLSFMIIGGAIFAIFWVETADMGPDATARQIQNSGMQIPGFRKNQGVIEKVMERYIPQVTVIGGALVGLLAVMANMLGTIGNVSGTGLLLTISITYKLYEEIAEEQMMEM 479
BLAST of FC877028 vs. ExPASy Swiss-Prot
Match: SECY_AERPE (Preprotein translocase subunit secY OS=Aeropyrum pernix GN=secY PE=3 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.197e-26 Identity = 68/229 (29.69%), Postives = 119/229 (51.97%), Query Frame = 1 Query: 103 PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASE 783 P++T T+ +++VY Q +V +P+ S+ +G + P++ Y +N+PI+L LVS+L + +LL + LG + Y +S + YY++ P + A+P ++ +F W+E++G + R+ A++L + + +PG R L++ L RYI + + AL ++AD GA G+GTG+LLAV II QY+ +ERA E Sbjct: 229 PDLTGFFTTLAAIILLVYLQAMRVEIPITSERFKGIRSRVPLQFIYVTNIPILLVGILVSDLLLVQRLL---------ADYLGV-ESRAYQIYS----SIVYYLSPPRGVVQSIADPVKTAVFIASWTVLSIVFGYMWVEIAGLNPREQAERLIKGGLAIPGMRSDPRVLERVLRRYIYPLTFLSSLIVAALVIVADIFGAYGTGTGLLLAVGIINQYYAMITRERALE 443
BLAST of FC877028 vs. ExPASy Swiss-Prot
Match: SECY_SULSO (Preprotein translocase subunit secY OS=Sulfolobus solfataricus GN=secY PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.051e-22 Identity = 68/234 (29.06%), Postives = 113/234 (48.29%), Query Frame = 1 Query: 103 PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYV----TAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 786 P++ L+ T+ + +I +Y + +PV S+ RG + P+ Y S++P+I + L S++ + L Y N+L V G+ ++ P S+ + +P AL Y V + LF W++V+G A+QL E + +PG R++ ++ L RYI A F + +G + V A +GA G+G GILLAVTI QY+ ER+ E+ Sbjct: 240 PDLVGLVTTIALIIITIYLTTMTIEIPVTSQKLRGIRRTIPLNFLYVSSIPVIFVAVLGSDIQLFASLA--SYVSPSASNILNT------------VSGVFFFPPPNSAIPHSIYAVVLDPLGALEYAVVFIVLSILFGILWVDVAGLDPATQAQQLVEAGIEIPGVRNNPKIIEGILARYIYPLAFFSSIIVGLIAVFATLLGAYGTGIGILLAVTIAIQYYSLLAYERSLEM 459
BLAST of FC877028 vs. ExPASy Swiss-Prot
Match: SECY_SULAC (Preprotein translocase subunit secY OS=Sulfolobus acidocaldarius GN=secY PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.729e-20 Identity = 60/230 (26.09%), Postives = 109/230 (47.39%), Query Frame = 1 Query: 103 PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 786 P++ L+ATV + +++VY + +PV ++ RG + P+ Y S++P+I S L +++ + L N N + P G+ P S+ + +P A Y + +F WI+V+G + A+Q+ + +PG R + ++ L++YI F + +G + V+A F+G G+G G+LLA+TI QY+ ER E+ Sbjct: 236 PDLIGLIATVGLTILIVYLVNTNIYIPVTTQRLRGIRTTVPLNFLYVSSIPVIFVSVLGADIQLFASL------ANSISNSASGILTDIANAFFFPPQGV------PHSVYALVVDPVGAAIYAAVFIVLSIVFGMLWIDVAGLDPKTQAEQMIRSGIEIPGMRTNPRIIEGILSKYIYALGFFSSLIVGLIAVVATFLGTYGTGVGLLLAITIAMQYYNLLAYERTLEM 453 The following BLAST results are available for this feature:
BLAST of FC877028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877028 ID=FC877028; Name=FC877028; organism=Citrus clementina; type=EST; length=869bpback to top |