FC877076

Overview
NameFC877076
Unique NameFC877076
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length816
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: STP4_ARATH (Sugar transport protein 4 OS=Arabidopsis thaliana GN=STP4 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.134e-14
Identity = 60/250 (24.00%), Postives = 107/250 (42.80%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLV----LLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTV 759
            WR  LG++ VPA++  +  L +P++P  L  +   E+A  +L  I     +++E   L  A+EE  + K   + + +      R                 IN + +Y+P + Q  GF S                + T V ++ +D FGR+ L L     +++S +    ++   F              + V  + +Y+A FA   GP+ W + SE+ P + R     ++ +VN     +VAQ FLT+
Sbjct:  200 WRISLGLACVPAVMIMIGALILPDTPNSLIERGYTEEAKEMLQSIRGTNEVDEEFQDLIDASEESKQVKHPWKNIML---PRYRPQLIMTCFIPFFQQLTGINVITFYAPVLFQTLGFGSKASLLSAMVTGI-IELLCTFVSVFTVDRFGRRILFLQGGIQMLVSQIAIGAMIGVKFGVAGTGNIGKSDANLIVALICIYVAGFAWSWGPLGWLVPSEISPLEIRSAAQAINVSVNMFFTFLVAQLFLTM 445          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: RCO3_NEUCR (Probable glucose transporter rco-3 OS=Neurospora crassa GN=rco-3 PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14
Identity = 61/245 (24.90%), Postives = 106/245 (43.27%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKI--YDIAR--LEDEIDHLSAAAEEELRKKKTVRYLDV-FKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVA 741
            +R  +G+    A +  + +  +PE+PR+L  + DK  A L LS++   DI    L +E+  + A  + E+       Y D+ F    +                  +N +MYY  T    AG  +              N   TI G+++++ +GR++L +    G+ I  +L++ AF              + +  +A+YI FFA   GPV W + SE+YP + R     ++   NW  N  +A
Sbjct:  192 YRVPIGLQLTWACVLALGLTVLPETPRYLIKRGDKNAAALSLSRLRRLDITHPALVEELAEIEANHQYEMALGPD-SYKDILFGEPHLGRRTFTGCCLQMLQQLTGVNFIMYYGTTFFNNAGVGN---PFKISLIMQVINTASTIPGLFVVESWGRRRLLMVGAIGMAICQLLIA-AFATASGSNNLSAQNKVLITFVAIYIFFFAASWGPVVWVVTSEIYPLKVRAKSMSITTASNWFLNFGIA 431          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: QAY_NEUAF (Quinate permease OS=Neurospora africana GN=qa-y PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14
Identity = 61/255 (23.92%), Postives = 105/255 (41.18%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLE----DEIDHLSAAAEEELRK--KKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGI-YLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVY-------GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQ 744
            W     V  +PA + F+   ++PESPRWLF    +E+AI VL  I ++   +    +EI ++ A  +   R+  K   +     K  ++R                 IN + YYSPT+ +  G                   V TI+ + +L+D  GR+++      G  + +  +  A+I                  G  A+    L+ AF+ P     PW +NSE++ +  R +    +A  NW  N I+++
Sbjct:  194 WLIPFAVQLIPAGLLFLGSFWIPESPRWLFANGRREEAIKVLCWIRNLEPTDRYIVEEISYIDADLQRYAREVGKGFWKPFLSLKQPKVRWRFFLGGMLFLWQNGSGINAINYYSPTVFRSIGITGTNTGFLTTGIFGVVKMVLTIIWLLWLVDLVGRRRILFVGATGGSLCMWFIG-AYIKIAGPGTTKTEEAKLTSGGIAAIFFFYLWTAFYTPSWNGTPWVINSEMFDQNTRSLGQASAAANNWFWNFIISR 447          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR5_MOUSE (Solute carrier family 2, facilitated glucose transporter member 5 OS=Mus musculus GN=Slc2a5 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14
Identity = 69/272 (25.37%), Postives = 125/272 (45.96%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFK---SKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVG---TIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 816
            W  +LG++ VPA +Q +L+ F PESPR+L + K D+  A   L  I     +  E++ +    E E    K   ++ V+K    + +R                 +N + YY+  I   AG +S+           GT AV    TI+ I++++ +GR+ L L   +  +I+ ++L+ A              +I+++ + +Y+   A G  P+P  L +E++ +  R     +  +V+W+SN  V   F  +   +G   +F+I A I  L
Sbjct:  191 WPVLLGLTGVPAGLQLLLLPFFPESPRYLLIQKKDEAAAERALQTIRGWKDVHLEMEEIRKEDEAE----KAAGFISVWKLFTMQSLRWQLISMIVLMAGQQLSGVNAIYYYADQIYLSAGVKSDD----VQYVTAGTGAVNVFMTILTIFVVELWGRRFLLLVGFSTCLIACLVLTAALALQNTISWMP---YISIVCVIVYVIGHALGPSPIPALLITEIFLQSSRPAAYMIGGSVHWLSNFTVGLIFPFIQMGLGP-YSFIIFATICFL 450          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: PLST2_ARATH (Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana GN=At1g67300 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.753e-14
Identity = 60/255 (23.53%), Postives = 107/255 (41.96%), Query Frame = 1
Query:   10 VPGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 774
            + G WR    +S +PA +  + M    ESP+WLF +    +A     ++   + ++  +  L     ++  +   V   ++   +  R                 IN V Y+S T+ + AG  S+            +N +G+++ + L+D  GRK L L S  G+  ++ L   A               ++V G  +++  FA G GPVP  L  E++P + R        +V+W+ N  V   FL + E +G
Sbjct:  205 ITGWWRVCFWLSTIPAALLALGMFLCAESPQWLFKQGKIAEAEAEFERLLGGSHVKTAMAELYKLDLDKTDEPDVVSLSELLYGRHSRVVFIGSTLFALQQLSG-INAVFYFSSTVFKSAGVPSDLGNIFVGV----SNLLGSVIAMVLMDKVGRKLLLLWSFIGMAAAMALQVGATSSYLPHFSALC---LSVGGTLVFVLTFALGAGPVPGLLLPEIFPSRIRAKAMAFCMSVHWVINFFVGLLFLRLLEKLG 451          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: STP3_ARATH (Sugar transport protein 3 OS=Arabidopsis thaliana GN=STP3 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14
Identity = 58/247 (23.48%), Postives = 113/247 (45.75%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKS-DKEKAILVLSKIYDIARLEDEI-DHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGF-QSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXV--YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 747
            WR  L  +A+PA I  +  LF+PE+P  +   + D  K  L+L ++     ++DE+ D + A++  +      ++ L     ++ R                 IN V +Y+P + +  GF +S            GT++  T++ + ++D  GRK L L     +++S V +    +            YG+  V+ + +Y+A F    GP+ W + SE++P + R +   ++  V+++    VAQ+
Sbjct:  205 WRISLATAAIPASILTLGSLFLPETPNSIIQTTGDVHKTELMLRRVRGTNDVQDELTDLVEASSGSDTDSNAFLKLLQ----RKYRPELVMALVIPFFQQVTGINVVAFYAPVLYRTVGFGESGSLMSTLVTGIVGTSS--TLLSMLVVDRIGRKTLFLIGGLQMLVSQVTIGVIVMVADVHDGVIKEGYGYAVVVLVCVYVAGFGWSWGPLGWLVPSEIFPLEIRSVAQSVTVAVSFVFTFAVAQS 445          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: RGT2_YEAST (High-affinity glucose transporter RGT2 OS=Saccharomyces cerevisiae GN=RGT2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14
Identity = 67/251 (26.69%), Postives = 108/251 (43.03%), Query Frame = 1
Query:   13 PGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIA----RLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXX----INTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVA 741
            P ++R  +G+  V + I  V M+F+PESPR+  +K +  KA   LS +  +     RL +E+  + A  + E     +   LD FK+ E R                     IN + YY        G  ++             N   +I G+YL+D  GR+ + L+   GVI+++  L  A +         V   I +  + L+IA F+   G V W +++E+YP   R  C  + A  NW+ N   A
Sbjct:  262 PSSYRIPIGLQYVWSSILAVGMIFLPESPRYYVLKDELNKAAKSLSFLRGLPIEDPRLLEELVEIKATYDYEASFGPST-LLDCFKTSENRPKQILRIFTGIAIQAFQQASGINFIFYYGVNFFNNTGVDNSYLVSFISY---AVNVAFSIPGMYLVDRIGRRPVLLAG--GVIMAIANLVIAIVGVSEGKTV-VASKIMIAFICLFIAAFSATWGGVVWVVSAELYPLGVRSKCTAICAAANWLVNFTCA 505          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: QAY_NEUTR (Quinate permease OS=Neurospora terricola GN=qa-y PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14
Identity = 59/255 (23.14%), Postives = 106/255 (41.57%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLE----DEIDHLSAAAEEELRK--KKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGI-YLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVY-------GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQ 744
            W     V  +PA + F+   ++PESPRWLF    +E+A+ VL  + ++   +    +E+ ++ A  E   R+  K   +     K ++++                 IN + YYSPT+ +  G                   V TIV + +L+D  GR+++      G  + +  +  A+I                  G  A+    L+ AF+ P     PW +NSE++ +  R +    +A  NW  N I+++
Sbjct:  194 WLIPFAVQLIPAGLLFLGSFWIPESPRWLFANGKREEAMKVLCWMRNLEPTDRYIVEEVSYIDADLERYAREVGKGFWKPFLSLKQRKVQWRFFLGGMLFLWQNGSGINAINYYSPTVFRSIGITGTNTGFLTTGIFGVVKMVLTIVWLLWLVDLVGRRRMLFIGATGGSLCMWFIG-AYIKIAGPGSTKAEDAKLTSGGIAAIFFFYLWTAFYTPSWNGTPWVINSEMFDQNTRSLGQASAAANNWFWNFIISR 447          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: ERD6_ARATH (Sugar transporter ERD6 OS=Arabidopsis thaliana GN=ERD6 PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14
Identity = 66/277 (23.83%), Postives = 113/277 (40.79%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKI----YDIAR----LEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIV------GIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA 810
            WR +  V  VP +     + F+PESPRWL      ++    L ++     DI+R    + D ID      E ++ +    RY                            + V YY+ ++    GF S            GT+ + TI+         L+D  GR+ L ++S + + +S +LLS ++          +      IG+  +I  FA GMG +PW + +E++P   +   G +    NW+   I+  TF  + E   +G  FLI + ++
Sbjct:  209 WRLLTVVGLVPCVFHVFCLFFIPESPRWLAKLGRDKECRSSLQRLRGSDVDISREANTIRDTIDMTENGGETKMSELFQRRYA---------YPLIIGVGLMFLQQLCGSSGVTYYASSLFNKGGFPS----------AIGTSVIATIMVPKAMLATVLVDKMGRRTLLMASCSAMGLSALLLSVSYGFQSFGILPELTPIFTCIGVLGHIVSFAMGMGGLPWIIMAEIFPMNVKVSAGTLVTVTNWLFGWIITYTFNFMLEWNASG-MFLIFSMVS 465          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: STA_RICCO (Sugar carrier protein A OS=Ricinus communis GN=STA PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.059e-13
Identity = 68/268 (25.37%), Postives = 111/268 (41.42%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAV---GTIVGIYLIDHFGRKKLALSS----LAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAG 804
            WR  LG++A PA++  +  L +PE+P  L  +   EK   VL KI     ++ E   +  A+E     K   R +     K  R                 IN +++Y+P + Q  GF  N            T AV    T + I  +D  GR+ L +S     +   +I  ++L   F           +  + VI + L++  F    GP+ WT+ SE++P + R     ++  VN     ++AQ+F ++      G  FL  AG
Sbjct:  203 WRLSLGLAAAPALLMTIGGLLLPETPNSLIEQGLHEKGRNVLEKIRGTKHVDAEFQDMLDASELANSIKHPFRNI---LEKRNRPQLVMAIFMPTFQILTGINIILFYAPPLFQSMGFGGNAALYSSAV----TGAVLCSSTFISIATVDRLGRRFLLISGGIQMITCQVIVAIILGVKF--GDNQQLSKSFSVLVVIMICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQSFPSLLCAFKFG-IFLFFAG 460          
The following BLAST results are available for this feature:
BLAST of FC877076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
STP4_ARATH2.134e-1424.00Sugar transport protein 4 OS=Arabidopsis thaliana ... [more]
RCO3_NEUCR2.787e-1424.90Probable glucose transporter rco-3 OS=Neurospora c... [more]
QAY_NEUAF2.787e-1423.92Quinate permease OS=Neurospora africana GN=qa-y PE... [more]
GTR5_MOUSE2.787e-1425.37Solute carrier family 2, facilitated glucose trans... [more]
PLST2_ARATH4.753e-1423.53Probable plastidic glucose transporter 2 OS=Arabid... [more]
STP3_ARATH6.208e-1423.48Sugar transport protein 3 OS=Arabidopsis thaliana ... [more]
RGT2_YEAST6.208e-1426.69High-affinity glucose transporter RGT2 OS=Saccharo... [more]
QAY_NEUTR6.208e-1423.14Quinate permease OS=Neurospora terricola GN=qa-y P... [more]
ERD6_ARATH8.108e-1423.83Sugar transporter ERD6 OS=Arabidopsis thaliana GN=... [more]
STA_RICCO1.059e-1325.37Sugar carrier protein A OS=Ricinus communis GN=STA... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2AB11RM1 EHR Citrus clementina cDNA clone KN0AAN2AB11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877076 ID=FC877076; Name=FC877076; organism=Citrus clementina; type=EST; length=816bp
GCACGAGGGGTCCCTGGAACATGGAGATGGATGCTTGGAGTATCAGCTGT
GCCAGCTATCATTCAGTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCTA
GATGGCTTTTCATGAAGAGTGACAAAGAAAAAGCCATTTTGGTTCTTTCT
AAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAGC
TGCTGCAGAGGAAGAACTCCGAAAAAAGAAAACTGTCAGATACTTGGATG
TTTTTAAATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACTT
CAGGCATTTCAGCAGTTCACTGGTATCAACACAGTCATGTACTACAGCCC
GACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCAGCTAGCGCTTCTCC
TATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAATT
TATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAGC
TGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGAT
CATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCAGTCATCGGGTTA
GCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGAC
TCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGTA
TGTCAGCTACTGTGAACTGGATCTCAAATTTGATCGTGGCCCAAACCTTC
CTGACGGTTGCTGAACTAGTGGGCACTGGAGCCACTTTCTTGATTCTTGC
TGGCATTGCTGTACTT
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