FC877076

Overview
NameFC877076
Unique NameFC877076
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length816
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR12_XENLA (Solute carrier family 2, facilitated glucose transporter member 12 OS=Xenopus laevis GN=slc2a12 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.208e-11
Identity = 45/168 (26.79%), Postives = 78/168 (46.43%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKE-IRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLV 522
            W++M G+    A +Q V M F+P SPR+L MK   + A  VL K+     + +E+  + ++ + E + K    +LD+F S++ +R                    +++Y+ T+++  GFQS +              V TI  I+L+D  G K       A + +SLV
Sbjct:  190 WKYMFGLITPLAALQAVAMFFLPRSPRFLIMKGYDDAAGKVLQKLRATTDINEELTAIKSSIKAEYQYK----FLDLFCSRDNMRARLLIGLTLSFFVQITGQPNILFYASTVLKSVGFQSTEAASLASTGIGVVKVVSTIPAIFLVDKIGSKTFLCIGSAVMAVSLV 353          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR12_MOUSE (Solute carrier family 2, facilitated glucose transporter member 12 OS=Mus musculus GN=Slc2a12 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.208e-11
Identity = 41/153 (26.80%), Postives = 74/153 (48.37%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKE-IRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRK 477
            W++M G+     ++Q + M F+P SPR+L MK  +E A  VL K+  I+   +E+  + ++ ++E +      + D+F+SK+ +R                    +++Y+ T+++  GFQSN+              V TI    L+DH G K
Sbjct:  200 WKYMFGLVIPLGVLQAIAMYFLPPSPRFLVMKGQEESAGKVLRKLRVISDTTEELTLIKSSLKDEYQ----YSFWDLFRSKDNMRTRILIGLTLVFFVQTTGQPNILFYASTVLKSVGFQSNEAASLASTGVGVVKVVSTIPATLLVDHIGSK 348          

HSP 2 Score: 69.3218 bits (168), Expect = 2.884e-11
Identity = 27/67 (40.30%), Postives = 48/67 (71.64%), Query Frame = 1
Query:  574 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 774
            Y W+++  L +Y+A F+ G+GP+PW + SE++P   RG    +++++NW  NL+++ TFLTV +L+G
Sbjct:  465 YKWLSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGVNLLISLTFLTVTDLIG 531          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: YAAU_ECOLI (Putative metabolite transport protein yaaU OS=Escherichia coli (strain K12) GN=yaaU PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.884e-11
Identity = 58/268 (21.64%), Postives = 108/268 (40.30%), Query Frame = 1
Query:   10 VPGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAV 813
            V G WRWMLG +A+P ++  +    +PESPRWL  K   ++   ++ K++      DE             + +  R+ D+F  +                    +  +  + P IV + G    +              +G I  +  ++  GR+ L + S A + ++L +L              +  W+ V+  A+Y AFF+ G G + W   +E++P   R    G+  +++ I  ++            G   T L+ AGI++
Sbjct:  168 VEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFDE------------EQPQQTRFRDLFNRRHF--PFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLG---------LIPDMGIWLVVMAFAVY-AFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISL 411          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: HXT2_YEAST (High-affinity glucose transporter HXT2 OS=Saccharomyces cerevisiae GN=HXT2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.766e-11
Identity = 68/270 (25.19%), Postives = 105/270 (38.89%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLED-----EIDHLSAAAEEELRKKKTVRYLDVFKSK-EIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA-----FIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVA--QTFLTVAELVGTGATFL 792
            WR  LG++   AI     ML +PESPR+L  K   E A   L+K   +  +ED     E+D + A  E E R      + ++F +K  I                   N   YY  TI    G + +             N   T V +Y +D FGR+K  L   A + I  V+ S       +            G + ++   L+I FFA    P+ + + +E YP + +     ++   NWI   ++     F+T A     G  F+
Sbjct:  226 WRVPLGLNFAFAIFMIAGMLMVPESPRFLVEKGRYEDAKRSLAKSNKVT-IEDPSIVAEMDTIMANVETE-RLAGNASWGELFSNKGAILPRVIMGIMIQSLQQLTGNNYFFYYGTTIFNAVGMKDSFQTSIVLGI---VNFASTFVALYTVDKFGRRKCLLGGSASMAICFVIFSTVGVTSLYPNGKDQPSSKAAGNVMIVFTCLFIFFFAISWAPIAYVIVAESYPLRVKNRAMAIAVGANWIWGFLIGFFTPFITSAIGFSYGYVFM 490          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: KHT2_KLULA (Hexose transporter 2 OS=Kluyveromyces lactis GN=KHT2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.919e-11
Identity = 61/246 (24.80%), Postives = 98/246 (39.84%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMK---SDKEKAILVLSKI-YDIARLEDEIDHLSAAAE-EELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLS-------WAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWI 723
            WR  LG+    AI     MLF+PESPR+L  K    + +++I   +K+ Y+   ++ E+D + A  E E L    +++ L   K+K  +                  N   YY  TI    G   +             N   T V IY++D FGR+K  L   A +   +V+ +       W              G   ++    YI  FA    P+ + + +E YP + +  C  ++   NWI
Sbjct:  232 WRVPLGLCFAWAIFMITGMLFVPESPRFLVEKDRIDEAKRSIAKSNKVSYEDPAVQAEVDLICAGVEAERLAGSASIKELFSTKTKVFQRLIMGMLIQSFQQLTGN-NYFFYYGTTIFNSVGMDDSFETSIVLGI---VNFASTFVAIYVVDKFGRRKCLLWGAAAMTACMVVFASVGVTRLWPDGANHPETASKGAGNCMIVFACFYIFCFATSWAPIAYVVVAESYPLRVKAKCMAIATASNWI 473          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR10_XENLA (Solute carrier family 2, facilitated glucose transporter member 10 OS=Xenopus laevis GN=slc2a10 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.919e-11
Identity = 28/82 (34.15%), Postives = 47/82 (57.32%), Query Frame = 1
Query:  571 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 816
            +  WI ++ +  +++ F+ G GP+ W + SE+YP   RG       + NW +NL++  TFL V   +G G TFL+  G+ +L
Sbjct:  414 ILNWITLLSMMAFVSAFSIGFGPMTWLVLSEIYPADIRGRAFAFCNSFNWAANLLITLTFLEVIGSIGLGWTFLLYGGVGLL 495          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GHT4_SCHPO (High-affinity hexose transporter ght4 OS=Schizosaccharomyces pombe GN=ght4 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.424e-11
Identity = 57/255 (22.35%), Postives = 104/255 (40.78%), Query Frame = 1
Query:   19 TWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIAR----LEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVG-IYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVY---------GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVA 741
            +WR   G++ +  I   V +LF+PESPR+L  K   E+A+ ++ +  ++      ++   + + +  E E+   K  R+ +VF  KE+R                  N   YY+  + +  G               G    GT  G +Y ID+ GR+   +   A   I        FI         +Y         G + ++   L++  +    GP+ W +  E +P +YR  C  ++ + NW+ N +V+
Sbjct:  177 SWRTSFGINILWGIFLMVGVLFLPESPRYLIYKGRDEEALRIMCQTAELDPESEIIQTNFNTIKSDIEMEMAGGKA-RWPEVF-GKEVRYRTVLGFLTMLLRELIGNNYYFYYATQVFKGTGMTD----IFLPAVILGAINFGTTFGALYTIDNLGRRNPLIFGAAFQSICF------FIYAAVGDRKLIYKNGTSDHRAGAVMIVFSCLFLFSYCCSWGPMGWVIVGETFPIRYRSKCAAVATSGNWLGNFMVS 419          
The following BLAST results are available for this feature:
BLAST of FC877076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
GTR12_XENLA2.208e-1126.79Solute carrier family 2, facilitated glucose trans... [more]
GTR12_MOUSE2.208e-1126.80Solute carrier family 2, facilitated glucose trans... [more]
YAAU_ECOLI2.884e-1121.64Putative metabolite transport protein yaaU OS=Esch... [more]
HXT2_YEAST3.766e-1125.19High-affinity glucose transporter HXT2 OS=Saccharo... [more]
KHT2_KLULA4.919e-1124.80Hexose transporter 2 OS=Kluyveromyces lactis GN=KH... [more]
GTR10_XENLA4.919e-1134.15Solute carrier family 2, facilitated glucose trans... [more]
GHT4_SCHPO6.424e-1122.35High-affinity hexose transporter ght4 OS=Schizosac... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2AB11RM1 EHR Citrus clementina cDNA clone KN0AAN2AB11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877076 ID=FC877076; Name=FC877076; organism=Citrus clementina; type=EST; length=816bp
GCACGAGGGGTCCCTGGAACATGGAGATGGATGCTTGGAGTATCAGCTGT
GCCAGCTATCATTCAGTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCTA
GATGGCTTTTCATGAAGAGTGACAAAGAAAAAGCCATTTTGGTTCTTTCT
AAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAGC
TGCTGCAGAGGAAGAACTCCGAAAAAAGAAAACTGTCAGATACTTGGATG
TTTTTAAATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACTT
CAGGCATTTCAGCAGTTCACTGGTATCAACACAGTCATGTACTACAGCCC
GACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCAGCTAGCGCTTCTCC
TATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAATT
TATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAGC
TGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGAT
CATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCAGTCATCGGGTTA
GCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGAC
TCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGTA
TGTCAGCTACTGTGAACTGGATCTCAAATTTGATCGTGGCCCAAACCTTC
CTGACGGTTGCTGAACTAGTGGGCACTGGAGCCACTTTCTTGATTCTTGC
TGGCATTGCTGTACTT
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