FC877076

Overview
NameFC877076
Unique NameFC877076
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length816
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR1_SHEEP (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Ovis aries GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.274e-24
Identity = 77/266 (28.95%), Postives = 127/266 (47.74%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKE-KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 816
            W  +L V  +PA++Q +L+ F PESPR+L +  ++E +A  VL K+   A +  ++  +   + + +R+KK V  L++F+S   R                 IN V YYS +I + AG Q               N   T+V +++++  GR+ L L  LAG+    VL++ A               +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   NW SN IV   F  V +L G    F+I   + VL
Sbjct:   84 WPLLLSVIFIPALLQCILLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTRDLQEMKEESRQMMREKK-VTILELFRSAAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGI---VNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQLPWMSYLSIVAIFG---FVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGP-YVFIIFTVLLVL 341          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR1_RAT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus GN=Slc2a1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.274e-24
Identity = 77/266 (28.95%), Postives = 126/266 (47.37%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKE-KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 816
            W  +L V  +PA++Q +L+ F PESPR+L +  ++E +A  VL K+   A +  ++  +     + +R+KK V  L++F+S   R                 IN V YYS +I + AG Q               N   T+V +++++  GR+ L L  LAG+    VL++ A               +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   NW SN IV   F  V +L G    F+I   + VL
Sbjct:  186 WPLLLSVIFIPALLQCILLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTRDLQEMKEEGRQMMREKK-VTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGI---VNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQLPWMSYLSIVAIFG---FVAFFEVGPGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCFQYVEQLCGP-YVFIIFTVLLVL 443          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR1_BOVIN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Bos taurus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.274e-24
Identity = 77/266 (28.95%), Postives = 127/266 (47.74%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKE-KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 816
            W  +L V  +PA++Q +L+ F PESPR+L +  ++E +A  VL K+   A +  ++  +   + + +R+KK V  L++F+S   R                 IN V YYS +I + AG Q               N   T+V +++++  GR+ L L  LAG+    VL++ A               +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   NW SN IV   F  V +L G    F+I   + VL
Sbjct:  186 WPLLLSVIFIPALLQCILLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTRDLQEMKEESRQMMREKK-VTILELFRSAAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGI---VNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLERLPWMSYLSIVAIFG---FVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGP-YVFIIFTVLLVL 443          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR1_MOUSE (Solute carrier family 2, facilitated glucose transporter member 1 OS=Mus musculus GN=Slc2a1 PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 2.970e-24
Identity = 77/266 (28.95%), Postives = 126/266 (47.37%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKE-KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 816
            W  +L V  +PA++Q +L+ F PESPR+L +  ++E +A  VL K+   A +  ++  +     + +R+KK V  L++F+S   R                 IN V YYS +I + AG Q               N   T+V +++++  GR+ L L  LAG+    VL++ A               +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   NW SN IV   F  V +L G    F+I   + VL
Sbjct:  186 WPLLLSVIFIPALLQCILLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTRDLQEMKEEGRQMMREKK-VTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGI---VNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLERLPWMSYLSIVAIFG---FVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGP-YVFIIFTVLLVL 443          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR1_CHICK (Solute carrier family 2, facilitated glucose transporter member 1 OS=Gallus gallus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.970e-24
Identity = 74/271 (27.31%), Postives = 129/271 (47.60%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKE-KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 816
            G    W  +LG   VPA++Q +++ F PESPR+L +  ++E KA  VL K+     +  ++  +   + + +R+KK V  +++F+S   R                 IN V YYS +I + +G +               N   T+V +++++  GR+ L L  LAG+    +L++ A               +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   NW SN IV   F  +A+L G+   F+I   + VL
Sbjct:  180 GNDSLWPLLLGFIFVPALLQCIILPFAPESPRFLLINRNEENKAKSVLKKLRGTTDVSSDLQEMKEESRQMMREKK-VTIMELFRSPMYRQPILIAIVLQLSQQLSGINAVFYYSTSIFEKSGVEQPVYATIGSGV---VNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALTLLDQMPWMSYLSIVAIFG---FVAFFEIGPGPIPWFIVAELFSQGPRPAAFAVAGLSNWTSNFIVGMGFQYIAQLCGS-YVFIIFTVLLVL 442          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: ITR2_SCHPO (Myo-inositol transporter 2 OS=Schizosaccharomyces pombe GN=itr2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.617e-24
Identity = 75/273 (27.47%), Postives = 130/273 (47.62%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKK--KTVRYLDVFKSKEI-------RXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVY-GW--IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAG 804
            WR M G+ A PA+ Q + + + PESPR+L   +  EK   +LS+I+  A+   EI +  +  +E ++    +  ++   F S ++       R                  N + Y+S  I Q  GF+++            TN V TIV    ID  GR+++ L + A +I  L L + A+             GW  + +  + +++A +A G+G +PW   +E++P + R +  G S  +NW+ NLI++ +FLT+ E +    TF + AG
Sbjct:  239 WRIMFGIGAAPALGQLISLFWTPESPRYLLRHNHVEKVYKILSRIHPEAK-PAEIAYKVSLIQEGVKVDFPEGNKFQHFFHSLKVLFTVPSNRRSLFIGCFLQWFQQFSGTNAIQYFSAIIFQSVGFKNS---ISVSIVVGATNFVFTIVAFMFIDRIGRRRILLCTSAVMIAGLALCAIAYHFLPADTTQNTNSGWQYVVLASIIIFLASYASGIGNIPWQ-QAELFPMEVRALGAGFSTAINWVGNLIISASFLTMMESITPTGTFALFAG 506          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR1_HUMAN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Homo sapiens GN=SLC2A1 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.617e-24
Identity = 74/266 (27.82%), Postives = 127/266 (47.74%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKE-KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 816
            W  +L +  +PA++Q +++ F PESPR+L +  ++E +A  VL K+   A +  ++  +   + + +R+KK V  L++F+S   R                 IN V YYS +I + AG Q               N   T+V +++++  GR+ L L  LAG+    +L++ A               +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   NW SN IV   F  V +L G    F+I   + VL
Sbjct:  186 WPLLLSIIFIPALLQCIVLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTHDLQEMKEESRQMMREKK-VTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGI---VNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALALLEQLPWMSYLSIVAIFG---FVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGP-YVFIIFTVLLVL 443          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: PLT5_ARATH (Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24
Identity = 75/282 (26.60%), Postives = 128/282 (45.39%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYD-----IARLEDEIDHLSA-----------AAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLAL-YIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 816
            WR MLG+ AVP++I  + +L MPESPRWL M+     A  VL K  D       RLED I H +             +      +   R L +  +  +R                 I+ V+ +SP I + AG +++                  +V  +L+D  GR+ L L+S+ G+++SL  L  +           ++  +  I   + Y+A F+ G GP+ W  +SE++P + R     M   VN +++ +++ +FL +++ + TG  F +  GIA +
Sbjct:  194 WRLMLGIGAVPSVILAIGVLAMPESPRWLVMQGRLGDAKRVLDKTSDSPTEATLRLED-IKHAAGIPADCHDDVVQVSRRNSHGEGVWRELLIRPTPAVRRVMIAAIGIHFFQQASGIDAVVLFSPRIFKTAGLKTDHQQLLATVAVGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLSLAALGTSLTIIDQSEKKVMWAVVVAIATVMTYVATFSIGAGPITWVYSSEIFPLRLRSQGSSMGVVVNRVTSGVISISFLPMSKAMTTGGAFYLFGGIATV 474          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR2_CHICK (Solute carrier family 2, facilitated glucose transporter member 2 OS=Gallus gallus GN=SLC2A2 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.643e-24
Identity = 72/256 (28.12%), Postives = 117/256 (45.70%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKK-----KTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 774
            W  +LG+S V A++QF L+L  PESPR+L++K  K     V      + RL    D +   AE E  K+     K V    +F S + R                 IN + YYS  I Q AG                 N V T++ ++L++  GR+ L L+ L G++IS V ++   +            +++++ + L++ FF  G GP+PW + +E++ +  R     ++   NW  N IV   F  +A+L G
Sbjct:  230 WPLLLGLSGVAALLQFFLLLLCPESPRYLYIKLGK-----VEEAKKSLKRLRGNCDPMKEIAEMEKEKQEAASEKRVSIGQLFSSSKYRQAVIVALMVQISQQFSGINAIFYYSTNIFQRAGVGQPVYATIGVGV---VNTVFTVISVFLVEKAGRRSLFLAGLMGMLISAVAMTVGLVLLSQFAWM---SYVSMVAIFLFVIFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFCNWACNFIVGMCFQYIADLCG 474          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR1_RABIT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Oryctolagus cuniculus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.129e-23
Identity = 76/266 (28.57%), Postives = 126/266 (47.37%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKE-KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 816
            W  +L V  VPA++Q +++   PESPR+L +  ++E +A  VL K+   A +  ++  +   + + +R+KK V  L++F+S   R                 IN V YYS +I + AG Q               N   T+V +++++  GR+ L L  LAG+    VL++ A               +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   NW SN IV   F  V +L G    F+I   + VL
Sbjct:  186 WPLLLSVIFVPALLQCIVLPLCPESPRFLLINRNEENRAKSVLKKLRGNADVTRDLQEMKEESRQMMREKK-VTILELFRSPAYRQPILSAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGI---VNTAFTVVSLFVVERAGRRTLHLIGLAGMAACAVLMTIALALLEQLPWMSYLSIVAIFG---FVAFFEVGPGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCFQYVEQLCGP-YVFIIFTVLLVL 443          
The following BLAST results are available for this feature:
BLAST of FC877076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
GTR1_SHEEP2.274e-2428.95Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RAT2.274e-2428.95Solute carrier family 2, facilitated glucose trans... [more]
GTR1_BOVIN2.274e-2428.95Solute carrier family 2, facilitated glucose trans... [more]
GTR1_MOUSE2.970e-2428.95Solute carrier family 2, facilitated glucose trans... [more]
GTR1_CHICK2.970e-2427.31Solute carrier family 2, facilitated glucose trans... [more]
ITR2_SCHPO6.617e-2427.47Myo-inositol transporter 2 OS=Schizosaccharomyces ... [more]
GTR1_HUMAN6.617e-2427.82Solute carrier family 2, facilitated glucose trans... [more]
PLT5_ARATH8.643e-2426.60Polyol transporter 5 OS=Arabidopsis thaliana GN=PL... [more]
GTR2_CHICK8.643e-2428.13Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RABIT1.129e-2328.57Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2AB11RM1 EHR Citrus clementina cDNA clone KN0AAN2AB11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877076 ID=FC877076; Name=FC877076; organism=Citrus clementina; type=EST; length=816bp
GCACGAGGGGTCCCTGGAACATGGAGATGGATGCTTGGAGTATCAGCTGT
GCCAGCTATCATTCAGTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCTA
GATGGCTTTTCATGAAGAGTGACAAAGAAAAAGCCATTTTGGTTCTTTCT
AAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAGC
TGCTGCAGAGGAAGAACTCCGAAAAAAGAAAACTGTCAGATACTTGGATG
TTTTTAAATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACTT
CAGGCATTTCAGCAGTTCACTGGTATCAACACAGTCATGTACTACAGCCC
GACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCAGCTAGCGCTTCTCC
TATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAATT
TATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAGC
TGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGAT
CATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCAGTCATCGGGTTA
GCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGAC
TCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGTA
TGTCAGCTACTGTGAACTGGATCTCAAATTTGATCGTGGCCCAAACCTTC
CTGACGGTTGCTGAACTAGTGGGCACTGGAGCCACTTTCTTGATTCTTGC
TGGCATTGCTGTACTT
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