FC877076

Overview
NameFC877076
Unique NameFC877076
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length816
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR3_RABIT (Solute carrier family 2, facilitated glucose transporter member 3 (Fragment) OS=Oryctolagus cuniculus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.742e-22
Identity = 69/262 (26.34%), Postives = 123/262 (46.95%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEE--LRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILA 801
            W  +LG + +PAI+Q   + F PESPR+L +  ++++A  +L  +  +   +D    +    EE   +R++K V  L++F++   R                 IN V YYS  I + AG +               N + TIV ++L++  GR+ L L  L G+ +  VL++ + +  X      +   + +  + +Y AFF  G GP+PW + + ++ +  R     ++   NW SN +V   F + A  +G    F+I A
Sbjct:   87 WPVLLGFTIIPAILQSAALPFCPESPRFLLINKEEDEAKQILQILQRLWGTQDVAQDIQEMKEESARMRQEKQVTVLELFRAPSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGVRE---PIYATIGAGVVNTIFTIVSVFLVERAGRRTLHLIGLGGMALCSVLMTVSLLLKXKYDTMSL---VCIAAILIYAAFFEIGPGPIPWLIVTGLFSQDPRPAAMAVAGCSNWTSNFLVGLLFPSAAYYLG-AYVFVIFA 341          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: YFIG_BACSU (Putative metabolite transport protein yfiG OS=Bacillus subtilis GN=yfiG PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.194e-22
Identity = 68/265 (25.66%), Postives = 121/265 (45.66%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 816
            WR+ML ++ +PA++ +  ML +PESPRWL  K     A+ VL +I + ++ + EI  +  A E   +K         F+   IR                 +N++MYY   I++ AGFQ+ +            + +  I GI+L+    R+ + +    G + +L+L+    I            ++ +    L++AF    +  V W + SE++P   RG+  G+S    W +N ++  TF  +   +G  ATF I   + +L
Sbjct:  183 WRYMLVIATLPAVVLWFGMLIVPESPRWLAAKGRMGDALRVLRQIREDSQAQQEIKEIKHAIEGTAKKAG----FHDFQEPWIRRILFIGIGIAIVQQITGVNSIMYYGTEILREAGFQT-EAALIGNIANGVISVIAVIFGIWLLGKVRRRPMLIIGQIGTMTALLLIG---ILSIVLEGTPALPYVVLSLTILFLAFQQTAISTVTWLMLSEIFPMHVRGLGMGISTFCLWTANFLIGFTFPILLNHIGMSATFFIFVAMNIL 439          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR3_SHEEP (Solute carrier family 2, facilitated glucose transporter member 3 OS=Ovis aries GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.194e-22
Identity = 70/262 (26.72%), Postives = 123/262 (46.95%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELR--KKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVI---GLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 774
            G    W  +LG + +PAIIQ   + F PESPR+L + + ++EKA  +L +++     ED    +    +E +R  ++K V  L++F++   R                 IN V YYS  I + AG Q               N + T+V ++L++  GR+ L L  L G+    +L++ + +          Y W++ I    + +++AFF  G GP+PW + +E++ +  R     ++   NW SN +V   F +    +G
Sbjct:  179 GTEDLWPLLLGFTILPAIIQCAALPFCPESPRFLLINRKEEEKAKEILQRLWGT---EDVAQDIQEMKDESMRMSQEKQVTVLELFRAPNYRQPIIISIMLQLSQQLSGINAVFYYSTGIFKDAGVQEPVYATIGAGV---VNTIFTVVSVFLVERAGRRTLHLIGLGGMAFCSILMTISLLLKDN------YSWMSFICIGAILVFVAFFEIGPGPIPWFIVAELFGQGPRPAAMAVAGCSNWTSNFLVGLLFPSATFYLG 428          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR4_HUMAN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Homo sapiens GN=SLC2A4 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.089e-22
Identity = 76/273 (27.84%), Postives = 127/273 (46.52%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKE----KAILVLSKIYDI----ARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILA 801
            G    W  +LG++ +PA++Q VL+ F PESPR+L++  + E    K++  L+   D+    A L+DE        + +L +++ +  L +  S+  R                 IN V YYS +I + AG                 N V T+V + L++  GR+ L L  LAG+    +L++ A +             +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   NW SN I+   F  VAE +G    FL+ A
Sbjct:  197 GTASLWPLLLGLTVLPALLQLVLLPFCPESPRYLYIIQNLEGPARKSLKRLTGWADVSGVLAELKDE--------KRKLERERPLSLLQLLGSRTHRQPLIIAVVLQLSQQLSGINAVFYYSTSIFETAGVGQPAYATIGAGV---VNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLERVPAMSYVSIVAIFG---FVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTSNFIIGMGFQYVAEAMGP-YVFLLFA 454          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.089e-22
Identity = 71/250 (28.40%), Postives = 118/250 (47.20%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLF---MKSDKEKAILVLSKIY-DIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-IXXXXXXXXXVYGWIA---VIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 747
            WR +  +  +P  +    + F+PESPRWL    M  + E ++ VL     DI    +EI    A++     K+ TVR++D+ K +                    IN V++YS TI + AG  S+               V T +  +L+D  GR+ L   S  G+ ISLV+++ AF +         +Y W++   V+G+   + FF+ GMGP+PW + SE+ P   +G+ G ++   NW  + ++  T
Sbjct:  199 WRILAVLGILPCTLLIPGLFFIPESPRWLAKMGMTDEFETSLQVLRGFETDITVEVNEIKRSVASST----KRNTVRFVDL-KRRRYYFPLMVGIGLLVLQQLGGINGVLFYSSTIFESAGVTSSNAATFGVG---AIQVVATAISTWLVDKAGRRLLLTISSVGMTISLVIVAAAFYLKEFVSPDSDMYSWLSILSVVGVVAMVVFFSLGMGPIPWLIMSEILPVNIKGLAGSIATLANWFFSWLITMT 440          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: STP11_ARATH (Sugar transport protein 11 OS=Arabidopsis thaliana GN=STP11 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.243e-21
Identity = 73/269 (27.14%), Postives = 122/269 (45.35%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLV----LLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 816
            WR  LG++ VPA++  V   F+P++P  +  + +KEKA  +L KI     +E E + L  A   E  KK    + ++ +++  R                 IN +M+Y+P + +  GF  N             N + TIV IY +D FGR+ L L     +I++ +    ++ W F          V   I +  + LY+A FA   GP+ W + SE+ P + R     ++ +VN      + Q FLT+   +  G  F   AG+ ++
Sbjct:  203 WRLSLGLAGVPAVMMLVGCFFLPDTPNSILERGNKEKAKEMLQKIRGTMEVEHEFNELCNAC--EAAKKVKHPWTNIMQAR-YRPQLTFCTFIPFFQQLTGINVIMFYAPVLFKTIGF-GNDASLISAVITGLVNVLSTIVSIYSVDKFGRRALFLQGGFQMIVTQIAVGSMIGWKFGFNGEGNLSGVDADIILALICLYVAGFAWSWGPLGWLVPSEICPLEIRSAGQSLNVSVNMFFTFFIGQFFLTMLCHMKFG-LFYFFAGMVLI 466          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR4_RAT (Solute carrier family 2, facilitated glucose transporter member 4 OS=Rattus norvegicus GN=Slc2a4 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.848e-21
Identity = 71/266 (26.69%), Postives = 124/266 (46.62%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKE-KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILA 801
            G    W  +L ++ +PA++Q +L+ F PESPR+L++  + E  A   L ++   A + D +  L    + +L +++ +  L +  S+  R                 IN V YYS +I ++AG +               N V T+V + L++  GR+ L L  LAG+    +L++ A +             +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   NW  N IV   F  VA+ +G    FL+ A
Sbjct:  197 GTATLWPLLLAITVLPALLQLLLLPFCPESPRYLYIIRNLEGPARKSLKRLTGWADVSDALAELKDE-KRKLERERPLSLLQLLGSRTHRQPLIIAVVLQLSQQLSGINAVFYYSTSIFELAGVEQPAYATIGAGV---VNTVFTLVSVLLVERAGRRTLHLLGLAGMCGCAILMTVALLLLERVPSMSYVSIVAIFG---FVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTCNFIVGMGFQYVADAMGP-YVFLLFA 454          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR4_BOVIN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Bos taurus GN=SLC2A4 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 8.944e-21
Identity = 70/269 (26.02%), Postives = 125/269 (46.47%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKE----KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILA 801
            G    W  +LG++ +PA++Q VL+   PESPR+L++  + E    K++  L+   D++ +  E+       + +L +++ +  L +  S   R                 IN V YYS +I + AG +               N V T+V ++L++  GR+ L L  LAG+    +L++ A +             +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   NW  N I+   F  VA+ +G    FL+ A
Sbjct:  197 GTATLWPLLLGITVLPALLQMVLLPLCPESPRYLYIIRNLEGPARKSLKRLTGWADVSEVLAELKE----EKRKLERERPLSLLQLLGSHTHRQPLVIAIVLQLSQQLSGINAVFYYSTSIFESAGVEKPAYATIGAGV---VNTVFTLVSVFLVERAGRRTLHLLGLAGMCGCAILMTVALLLLERVPAMSYVSIVAIFG---FVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTCNFIIGMGFQYVADAMGP-YVFLLFA 454          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GLCP_SYNY3 (Glucose transport protein OS=Synechocystis sp. (strain PCC 6803) GN=gtr PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 8.944e-21
Identity = 71/270 (26.30%), Postives = 117/270 (43.33%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKE-IRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF----IXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 816
            WRWM     +PA++  V    +PESPR+L  +   EKA  +L K+ +   +   I+ + A    + +     R+ D+   +  +                  IN + YYS  + +  GF   +            N + T+V I  +D FGRK L L    G+ I+L +LS  F    +           G IA++   LY+  F    GP+ W L  E++  + R     ++A V WI+N I++ TF  + + VG G  + + A  A +
Sbjct:  185 WRWMFWTELIPALLYGVCAFLIPESPRYLVAQGQGEKAAAILWKV-EGGDVPSRIEEIQATVSLDHKP----RFSDLLSRRGGLLPIVWIGMGLSALQQFVGINVIFYYSSVLWRSVGFTEEKSLLITVITGF-INILTTLVAIAFVDKFGRKPLLLMGSIGMTITLGILSVVFGGATVVNGQPTLTGAAGIIALVTANLYVFSFGFSWGPIVWVLLGEMFNNKIRAAALSVAAGVQWIANFIISTTFPPLLDTVGLGPAYGLYATSAAI 448          
BLAST of FC877076 vs. ExPASy Swiss-Prot
Match: GTR3_HUMAN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Homo sapiens GN=SLC2A3 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.168e-20
Identity = 64/265 (24.15%), Postives = 122/265 (46.04%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIQFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAV 813
            W  +LG + +PAI+Q   + F PESPR+L + + ++E A  +L +++    +  +I  +   +   + ++K V  L++F+    R                 IN V YYS  I + AG Q               N + T+V ++L++  GR+ L +  L G+     L++ + +            ++ +  + +++AFF  G GP+PW + +E++ +  R     ++   NW SN +V   F + A  +G    F+I  G  +
Sbjct:  184 WPLLLGFTILPAILQSAALPFCPESPRFLLINRKEEENAKQILQRLWGTQDVSQDIQEMKDESAR-MSQEKQVTVLELFRVSSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGVQE---PIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKDNYNGM---SFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAHYLG-AYVFIIFTGFLI 440          
The following BLAST results are available for this feature:
BLAST of FC877076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
GTR3_RABIT4.742e-2226.34Solute carrier family 2, facilitated glucose trans... [more]
YFIG_BACSU6.194e-2225.66Putative metabolite transport protein yfiG OS=Baci... [more]
GTR3_SHEEP6.194e-2226.72Solute carrier family 2, facilitated glucose trans... [more]
GTR4_HUMAN8.089e-2227.84Solute carrier family 2, facilitated glucose trans... [more]
ERDL6_ARATH8.089e-2228.40Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]
STP11_ARATH5.243e-2127.14Sugar transport protein 11 OS=Arabidopsis thaliana... [more]
GTR4_RAT6.848e-2126.69Solute carrier family 2, facilitated glucose trans... [more]
GTR4_BOVIN8.944e-2126.02Solute carrier family 2, facilitated glucose trans... [more]
GLCP_SYNY38.944e-2126.30Glucose transport protein OS=Synechocystis sp. (st... [more]
GTR3_HUMAN1.168e-2024.15Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2AB11RM1 EHR Citrus clementina cDNA clone KN0AAN2AB11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877076 ID=FC877076; Name=FC877076; organism=Citrus clementina; type=EST; length=816bp
GCACGAGGGGTCCCTGGAACATGGAGATGGATGCTTGGAGTATCAGCTGT
GCCAGCTATCATTCAGTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCTA
GATGGCTTTTCATGAAGAGTGACAAAGAAAAAGCCATTTTGGTTCTTTCT
AAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAGC
TGCTGCAGAGGAAGAACTCCGAAAAAAGAAAACTGTCAGATACTTGGATG
TTTTTAAATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACTT
CAGGCATTTCAGCAGTTCACTGGTATCAACACAGTCATGTACTACAGCCC
GACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCAGCTAGCGCTTCTCC
TATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAATT
TATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAGC
TGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGAT
CATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCAGTCATCGGGTTA
GCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGAC
TCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGTA
TGTCAGCTACTGTGAACTGGATCTCAAATTTGATCGTGGCCCAAACCTTC
CTGACGGTTGCTGAACTAGTGGGCACTGGAGCCACTTTCTTGATTCTTGC
TGGCATTGCTGTACTT
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