FC877185
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF6_ORYSJ (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.580e-59 Identity = 105/137 (76.64%), Postives = 129/137 (94.16%), Query Frame = 3 Query: 102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 512 MAN+ASGMAV D+CKLKF ELK+KR++RFI FKI+E+ +QVVV++LG+P D+Y++FTAS+PA ECRYAV+DFDFVTDENCQKSKI FI+WSPDTSKVRSKM+YASSKDRFKRELDGIQVELQATDP+EM +D++++R Sbjct: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMPASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKAR 137
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF3_ARATH (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana GN=ADF3 PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.282e-58 Identity = 106/139 (76.26%), Postives = 124/139 (89.21%), Query Frame = 3 Query: 102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 518 MANAASGMAV DDCKLKF+ELK KRT+RFI++KIEE QKQV+VEK+GEP ++E+ ASLPADECRYA++DFDFV+ E +S+I F+AWSPDT++VRSKMIYASSKDRFKRELDGIQVELQATDPTEM LDV +SR N Sbjct: 1 MANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLPADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFKSRAN 139
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF7_ARATH (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 2.981e-58 Identity = 106/137 (77.37%), Postives = 127/137 (92.70%), Query Frame = 3 Query: 102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 512 MANAASGMAV+D+CKLKFLELK+KR YRFI+F+I+ +Q VVVEKLG P ++Y++FTASLPA+ECRYAV+DFDF+TDENCQKSKI FIAWSPD+S+VR KM+YASSKDRFKRELDGIQVELQATDP+EM D+++SR Sbjct: 1 MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQ--VVVEKLGNPDETYDDFTASLPANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSR 135
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF12_ARATH (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana GN=ADF12 PE=2 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 4.028e-55 Identity = 104/137 (75.91%), Postives = 122/137 (89.05%), Query Frame = 3 Query: 102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 512 MANAASGMAV+D+CKLKFLELKAKR YRFI+F+I+ +Q VVVEKLG P ++Y++FT LP +ECRYAVYDFDF T EN QKSKI FIAWSPD+S+VR KM+YASSKDRFKRELDGIQVELQATDP+EM LD+++SR Sbjct: 1 MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQ--VVVEKLGSPQENYDDFTNYLPPNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSLDIIKSR 135
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF9_ORYSJ (Actin-depolymerizing factor 9 OS=Oryza sativa subsp. japonica GN=ADF9 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.410e-54 Identity = 95/139 (68.35%), Postives = 122/139 (87.77%), Query Frame = 3 Query: 102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 518 MAN+ASG+AV+D+CK KF ELK +R +RFIVFKI++K ++ VE+LG+ ++ YE+F A+LPADECRYAVYD DFVTDENCQKSKI F +WSPDT++ RSKM+YASSKDRF+RELDGIQ E+QATDP+EM LD++R+R + Sbjct: 1 MANSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLPADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIIRARAH 139
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF2_MAIZE (Actin-depolymerizing factor 2 OS=Zea mays GN=ADF2 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 9.922e-54 Identity = 93/139 (66.91%), Postives = 122/139 (87.77%), Query Frame = 3 Query: 102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 518 MAN++SG+AV D+CK+KF +LKA+R++RFIVF+I++K ++ V++LGEP+ Y +FT SLPADECRYA+YD DF T ENCQKSKI F +WSPDT++ RSKM+YASSKDRF+RELDGIQ E+QATDP+EM LD+++SRTN Sbjct: 1 MANSSSGLAVSDECKVKFRDLKARRSFRFIVFRIDDKDMEIKVDRLGEPNQGYGDFTDSLPADECRYAIYDLDFTTVENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVKSRTN 139
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF1_MAIZE (Actin-depolymerizing factor 1 OS=Zea mays GN=ADF1 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.210e-53 Identity = 93/139 (66.91%), Postives = 122/139 (87.77%), Query Frame = 3 Query: 102 MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 518 MAN++SG+AV+D+CK+KF ELK++RT+RFIVF+I++ ++ V++LGEP+ Y +FT SLPA+ECRYA+YD DF T ENCQKSKI F +WSPDT++ RSKM+YASSKDRF+RELDGIQ E+QATDP+EM LD++RSRTN Sbjct: 1 MANSSSGLAVNDECKVKFRELKSRRTFRFIVFRIDDTDMEIKVDRLGEPNQGYGDFTDSLPANECRYAIYDLDFTTIENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVRSRTN 139
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF_BRANA (Actin-depolymerizing factor (Fragment) OS=Brassica napus PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.287e-50 Identity = 95/127 (74.80%), Postives = 115/127 (90.55%), Query Frame = 3 Query: 132 DDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSR 512 +D+CKLKFLELK KR +RFI+F+I+ +Q VVVEKLG P ++Y++FTASLPADECRYAV+DFDF T+ENCQKSKI FIAWSPD+S+VR KM+YASSKDRFKRELDGIQVELQATDP+EM D+++SR Sbjct: 1 EDNCKLKFLELK-KRIFRFIIFRIDGQQ--VVVEKLGNPQETYDDFTASLPADECRYAVFDFDFTTNENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSR 124
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF_VITVI (Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 8.692e-50 Identity = 88/137 (64.23%), Postives = 117/137 (85.40%), Query Frame = 3 Query: 108 NAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 518 NA+SGM V D K FLELK K+ +R+++FKI+EK+K+VVVEK G P++S++ F A+LP ++CRYAVYDFDFVT ENCQKSKI FIAWSPD+S++R+KM+YA+SK+RF+RELDG+ E+QATDPTEM L+V+R R + Sbjct: 7 NASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQATDPTEMDLEVLRERAH 143
BLAST of FC877185 vs. ExPASy Swiss-Prot
Match: ADF2_ORYSJ (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.063e-47 Identity = 87/143 (60.84%), Postives = 117/143 (81.82%), Query Frame = 3 Query: 90 FLQKMANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVMRSRTN 518 F++ +NA+SGM V D + FLEL+ K+ +R+++FKIEEKQKQVVVEK G ++SY++F ASLP ++CRYA+YDFDFVT EN QKSKI FIAWSP TS++R+KM+Y++SKDR K+ELDG E+QATDPTE+ L+V+R R + Sbjct: 3 FMRSHSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTEVDLEVLRERAH 145 The following BLAST results are available for this feature:
BLAST of FC877185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877185 ID=FC877185; Name=FC877185; organism=Citrus clementina; type=EST; length=680bpback to top |