FC877228

Overview
NameFC877228
Unique NameFC877228
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length557
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877228 vs. ExPASy Swiss-Prot
Match: G6PI_ECOHS (Glucose-6-phosphate isomerase OS=Escherichia coli O9:H4 (strain HS) GN=pgi PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.569e-23
Identity = 61/131 (46.56%), Postives = 80/131 (61.07%), Query Frame = 1
Query:  169 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEF-DGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKKFSETIHSGSW 555
            T  W+ L+ H  E+K   + DL + D DR       F D +L+DYS+   T +T+ KL  LA+   L   I  M++GEKIN TENR+VLHVALR   +  I  DGK+V+PEV  VL+K+K FSE I SG W
Sbjct:    9 TAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSATFGDQMLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALRNRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEW 139          
BLAST of FC877228 vs. ExPASy Swiss-Prot
Match: G6PI_ECO8A (Glucose-6-phosphate isomerase OS=Escherichia coli O8 (strain IAI1) GN=pgi PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.569e-23
Identity = 61/131 (46.56%), Postives = 80/131 (61.07%), Query Frame = 1
Query:  169 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEF-DGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKKFSETIHSGSW 555
            T  W+ L+ H  E+K   + DL + D DR       F D +L+DYS+   T +T+ KL  LA+   L   I  M++GEKIN TENR+VLHVALR   +  I  DGK+V+PEV  VL+K+K FSE I SG W
Sbjct:    9 TAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSATFGDQMLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALRNRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEW 139          
BLAST of FC877228 vs. ExPASy Swiss-Prot
Match: G6PI_ECO24 (Glucose-6-phosphate isomerase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=pgi PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.569e-23
Identity = 61/131 (46.56%), Postives = 80/131 (61.07%), Query Frame = 1
Query:  169 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEF-DGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKKFSETIHSGSW 555
            T  W+ L+ H  E+K   + DL + D DR       F D +L+DYS+   T +T+ KL  LA+   L   I  M++GEKIN TENR+VLHVALR   +  I  DGK+V+PEV  VL+K+K FSE I SG W
Sbjct:    9 TAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSATFGDQMLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALRNRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEW 139          
BLAST of FC877228 vs. ExPASy Swiss-Prot
Match: G6PI_DESAA (Glucose-6-phosphate isomerase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=pgi PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.569e-23
Identity = 55/130 (42.31%), Postives = 79/130 (60.77%), Query Frame = 1
Query:  169 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKKFSETIHSGSW 555
            T  W  L+ H ++IK  H+RD    D  R  +  +  D IL+D+S+   T KT++ L  LA  A L   IN M++GE IN TENR+VLH ALR   D  + +DGK+V+P+V  VL++++ FS  I +G W
Sbjct:    9 TRAWLFLEKHYEDIKNRHMRDFFKEDPRRFDNFSLALDDILVDFSKNRITTKTLELLLNLAHEAGLKEMINSMFSGEHINETENRAVLHTALRRQGDEPVLADGKDVMPDVRAVLEQMRVFSGRIITGEW 138          
BLAST of FC877228 vs. ExPASy Swiss-Prot
Match: G6PI_SHEHH (Glucose-6-phosphate isomerase OS=Shewanella halifaxensis (strain HAW-EB4) GN=pgi PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.661e-23
Identity = 56/127 (44.09%), Postives = 82/127 (64.57%), Query Frame = 1
Query:  178 WKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKKFSETIHSGSW 555
            W+ L+ H + +  +H+R+L S +  R   M  +  G+ LDYS+  A+ +TM  L++LA+  QL +KI  M+ GE IN+TE R+VLH ALRAP D  I  DG N+V EV + L K+ +F E++ SGSW
Sbjct:   10 WQALEKHSKTL--SHMRELFSTEPQRFNDMSTQACGLFLDYSKNRASQETMSLLFKLAKDTQLESKIKAMFAGEAINNTEQRAVLHTALRAPADKVIIVDGNNIVAEVQQTLAKMSEFVESLTSGSW 134          
BLAST of FC877228 vs. ExPASy Swiss-Prot
Match: G6PI_SHELP (Glucose-6-phosphate isomerase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=pgi PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.087e-23
Identity = 57/135 (42.22%), Postives = 86/135 (63.70%), Query Frame = 1
Query:  154 TLICDTEPWKDLKNHVQEIKKTHLRDLM-SDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKKFSETIHSGSW 555
            T +   + W  L+   Q  K  H+R+L  +D  R   M +   G+LLDYS+  A  +T+++L++LA++A L++KI+ M++GE IN+TE R+VLH ALRA  D  I  DG+N+VPEV +   K+ KF E + SG W
Sbjct:    2 TKLTQQDAWAQLE--AQAAKLPHMRELFEADPQRFDKMSLSACGLLLDYSKNRADEQTLEQLFKLAKSAGLSDKIHAMFDGEIINNTEKRAVLHTALRAEADEVILVDGQNIVPEVKQTQAKMAKFVEAVTSGEW 134          
BLAST of FC877228 vs. ExPASy Swiss-Prot
Match: G6PI_METFK (Glucose-6-phosphate isomerase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=pgi PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 6.087e-23
Identity = 54/127 (42.52%), Postives = 83/127 (65.35%), Query Frame = 1
Query:  178 WKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKKFSETIHSGSW 555
            W DL  H QE+    +RD+ + D  R +   +E +G+LLDYS+   T +T+  L++LA  +++    +RM+ GEKIN TENR+VLH ALR   +  +  DGK+V+P+V +VL +++KFS +I SG W
Sbjct:   10 WHDLSAHYQEVLPLQMRDMFTKDGRRFEKFSLEAEGLLLDYSKHRITDETLPLLFKLARDSKVEEWRDRMFAGEKINFTENRAVLHTALRNRSNTPVYVDGKDVMPDVNRVLAQMRKFSTSIRSGEW 136          
BLAST of FC877228 vs. ExPASy Swiss-Prot
Match: G6PI_KLEP7 (Glucose-6-phosphate isomerase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=pgi PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.087e-23
Identity = 59/131 (45.04%), Postives = 82/131 (62.60%), Query Frame = 1
Query:  169 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILL-DYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKKFSETIHSGSW 555
            T  W+ L+ H  E+K   + +L + D+DR       FD ++L D+S+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K FSE I SGSW
Sbjct:    9 TSAWQALQKHFDEMKDVTISELFAKDSDRFSKFSATFDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIVVDGKDVMPEVNAVLEKMKTFSEAIISGSW 139          
BLAST of FC877228 vs. ExPASy Swiss-Prot
Match: G6PI_KLEP3 (Glucose-6-phosphate isomerase OS=Klebsiella pneumoniae (strain 342) GN=pgi PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.087e-23
Identity = 59/131 (45.04%), Postives = 82/131 (62.60%), Query Frame = 1
Query:  169 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILL-DYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKKFSETIHSGSW 555
            T  W+ L+ H  E+K   + +L + D+DR       FD ++L D+S+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K FSE I SGSW
Sbjct:    9 TSAWQALQKHFDEMKDVTISELFAKDSDRFSKFSATFDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIVVDGKDVMPEVNAVLEKMKTFSEAIISGSW 139          
BLAST of FC877228 vs. ExPASy Swiss-Prot
Match: G6PI_STRGG (Glucose-6-phosphate isomerase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=pgi PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.951e-23
Identity = 59/141 (41.84%), Postives = 82/141 (58.16%), Query Frame = 1
Query:  136 LQMASSTLICDTEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINRMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKKFSETIHSGSW 555
            +  AS T +  T  W  L  H +E+    LR+L +   DR  +  +    + LDYS+   T +T+  L +LA A  +      M+ GEKIN+TE+R+VLH ALRAPRDA +  DG+NVVP V  VLDK+  F+E + SG W
Sbjct:    1 MNAASRTKLNQTPEWTALAKHREELGAPRLRELFARQPDRGTAYTLRVGDLHLDYSKHLVTDETLRLLRELAAATGVAELREAMFRGEKINTTEDRAVLHTALRAPRDAVVEVDGENVVPAVHAVLDKMAGFAEKVRSGQW 141          
The following BLAST results are available for this feature:
BLAST of FC877228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 353
Match NameE-valueIdentityDescription
G6PI_ECOHS3.569e-2346.56Glucose-6-phosphate isomerase OS=Escherichia coli ... [more]
G6PI_ECO8A3.569e-2346.56Glucose-6-phosphate isomerase OS=Escherichia coli ... [more]
G6PI_ECO243.569e-2346.56Glucose-6-phosphate isomerase OS=Escherichia coli ... [more]
G6PI_DESAA3.569e-2342.31Glucose-6-phosphate isomerase OS=Desulfatibacillum... [more]
G6PI_SHEHH4.661e-2344.09Glucose-6-phosphate isomerase OS=Shewanella halifa... [more]
G6PI_SHELP6.087e-2342.22Glucose-6-phosphate isomerase OS=Shewanella loihic... [more]
G6PI_METFK6.087e-2342.52Glucose-6-phosphate isomerase OS=Methylobacillus f... [more]
G6PI_KLEP76.087e-2345.04Glucose-6-phosphate isomerase OS=Klebsiella pneumo... [more]
G6PI_KLEP36.087e-2345.04Glucose-6-phosphate isomerase OS=Klebsiella pneumo... [more]
G6PI_STRGG7.951e-2341.84Glucose-6-phosphate isomerase OS=Streptomyces gris... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2BB08RM1 EHR Citrus clementina cDNA clone KN0AAN2BB08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877228 ID=FC877228; Name=FC877228; organism=Citrus clementina; type=EST; length=557bp
GCACGAGGCCTCGTGCCGGCACGAGGGCTTCATGCTTTTTGGTTCTTACG
CTCTCTATATTTCCAATTGCCCGCAATCCACCTCATCCAATTCTTCTACA
AATCTCTCTCTTTCCTTGGTTTCTCCTTCAGGATTTTGCAAATGGCTTCA
TCAACTCTAATTTGTGACACCGAGCCATGGAAGGACTTGAAGAACCATGT
GCAGGAAATTAAAAAGACTCATTTACGTGATTTGATGAGTGACACTGATC
GATGCCAATCAATGATGGTGGAGTTTGACGGGATTCTGTTGGACTACTCA
CGGCAAAATGCCACGCTTAAGACAATGGACAAACTCTATCAACTGGCAGA
GGCTGCTCAACTCAATAATAAGATTAACCGGATGTACAATGGGGAAAAAA
TTAACAGCACAGAGAATAGGTCTGTGCTTCATGTAGCTCTTCGTGCTCCA
AGGGATGCTGCCATAAATAGTGATGGGAAGAATGTGGTTCCAGAAGTTTG
GAAAGTTCTGGACAAGATAAAAAAATTTTCTGAGACAATCCACAGTGGTT
CCTGGGT
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