FC877252

Overview
NameFC877252
Unique NameFC877252
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUVR5_ARATH (Histone-lysine N-methyltransferase SUVR5 OS=Arabidopsis thaliana GN=SUVR5 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.813e-15
Identity = 53/177 (29.94%), Postives = 88/177 (49.72%), Query Frame = 2
Query:  158 VILPDLTSGAENIPVSLVND-VDDEKGPAH-----FTYLASLKYAQPVDSLE--IFGGCDCRNGCVPGDQICPCIQKNAGYL--------------------PYTSNGVLVTQKSL-VHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKDKGWGLRSWDPIRAGAFICEYAGQVID 601
            V+  D++ G E++P+ +V+D + + + P       FTY+ +      +D ++  +   C CR+       +C  +  +  YL                    PY     ++ ++   V+EC   C C  TC+NRV Q G+R  LEVF+T+ KGWGLR+ + I  G F+CEY G+V+D
Sbjct:  821 VLCKDISFGKESVPICVVDDDLWNSEKPYEMPWECFTYVTNSILHPSMDLVKENLQLRCSCRSS------VCSPVTCDHVYLFGNDFEDARDIYGKSMRCRFPYDGKQRIILEEGYPVYECNKFCGCSRTCQNRVLQNGIRAKLEVFRTESKGWGLRACEHILRGTFVCEYIGEVLD 991          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SETB1_DROPS (Histone-lysine N-methyltransferase eggless OS=Drosophila pseudoobscura pseudoobscura GN=egg PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.813e-15
Identity = 57/187 (30.48%), Postives = 84/187 (44.92%), Query Frame = 2
Query:  170 DLTSGAENIPVSLVNDVDDEKGPAHFTYLASLKYAQ---PVDSL------EIFGGCDCRNGCVPGDQICPCIQKNAGYLPYTS----------------NGVLVTQKSLVHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKDKGWGLRSWDPIRAGAFICEYAGQVIDISKIEELGGENVDDYLFD 655
            D++ G E + + LVN  D+   P         +YA+   P + +      E    CDC + C   +  C C Q     + Y +                 GVL      ++EC   C+C   C NRV Q  L + L+VFKT ++GWGLR  + I  GAF+C YAG ++  +K  E G +  D+Y  D
Sbjct:  953 DISKGQEKMAIPLVNYYDNTLPPP-------CEYAKQRIPTEGVNLNLDEEFLVCCDCEDDCSDKES-CACWQLTVTGVRYCNPKKPIEEIGYQYKRLHEGVLTG----IYECNSRCKCKKNCLNRVVQHSLEMKLQVFKTSNRGWGLRCVNDIPKGAFVCIYAGHLLTEAKANEGGQDAGDEYFAD 1127          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SETB1_DROME (Histone-lysine N-methyltransferase eggless OS=Drosophila melanogaster GN=egg PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.276e-15
Identity = 57/180 (31.67%), Postives = 83/180 (46.11%), Query Frame = 2
Query:  170 DLTSGAENIPVSLVNDVDDEKGPAHFTYLASLKYAQPVDSL------EIFGGCDCRNGCVPGDQICPCIQKNAGYLPYTSNGVLVTQ-----KSL-------VHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKDKGWGLRSWDPIRAGAFICEYAGQVIDISKIEELGGENVDDYLFD 655
            D++ G E + + LVN  D+   P   TY    K   P + +      E    CDC + C    + C C Q     + Y +    + +     K L       ++EC   C+C   C NRV Q  L + L+VFKT ++GWGLR  + I  GAFIC YAG ++  +   E G +  D+Y  D
Sbjct:  900 DISKGQEKMAIPLVNYYDNTLPPP-CTYA---KQRIPTEGVHLNLDEEFLLCCDCEDDCSDKSK-CACWQLTVAGVRYCNPKKPIEEIGYQYKRLHEHVPTGIYECNSRCKCKKNCLNRVVQFSLEMKLQVFKTSNRGWGLRCVNDIPKGAFICIYAGHLLTETMANEGGQDAGDEYFAD 1074          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUVH3_CHLRE (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Chlamydomonas reinhardtii GN=SUVH3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.890e-15
Identity = 60/192 (31.25%), Postives = 87/192 (45.31%), Query Frame = 2
Query:  164 LPDLTSGAENIPVSLVNDVDDEKGPAHFTYLASLKYAQPV-------------DSLEIFGGCDCRNGC-VPGDQICPCIQKNA---GYLP----------YTSNGVL-VTQKSLVHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKDKGWGLRSWDPIRAGAFICEYAGQVIDISKIEELGGENVDDYLFD 655
            L D++ G E +P+ ++N V+ E+ P  F Y     +A  V             + L+     D    C +  ++    + +     G LP          Y + G L VT    VHECG  C      RN     G+++ LEVF T+ KGWG+R  + + AGAF+C Y GQ+I  +  E   G  VD YLFD
Sbjct:  317 LEDVSGGQEAVPIPVINQVNSERLPTDFAYTREYAWAPGVYQLVAPALRLADEEMLQFSREGDRGGVCGIAFNRHIAALDRRLEQEGRLPQGYEAHLEEQYNAAGCLMVTDPCGVHECGDGCSAKACRRNMQLSAGVQLPLEVFMTESKGWGVRCREEVPAGAFVCCYVGQLITDAMAEVRKG--VDHYLFD 506          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUV91_PONAB (Histone-lysine N-methyltransferase SUV39H1 OS=Pongo abelii GN=SUV39H1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.890e-15
Identity = 48/164 (29.27%), Postives = 80/164 (48.78%), Query Frame = 2
Query:  200 VSLVNDVDDEKGPAHFTYLASLKYAQPVDSLEIFGGCDCRN-------GCVPGDQICPCIQKNAGYLPYTSNGVLVTQKSL-VHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKD-KGWGLRSWDPIRAGAFICEYAGQVIDISKIEELG---GENVDDYLFD 655
            +++ N+VD +  P  F Y+   +  + +   ++  GC+C++       GC PG  +            Y   G +  +  L ++EC   C+C   C NRV Q G+R  L +F+T D +GWG+R+ + IR  +F+ EY G++I   + E  G         YLFD
Sbjct:  145 ITVENEVDLDGPPRAFVYINEYRVGEGITLNQVAVGCECQDCLWAPTGGCCPGASLHK--------FAYNDQGQVRLRAGLPIYECNSRCRCGYDCPNRVVQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQIYDRQGATYLFD 300          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUV91_HUMAN (Histone-lysine N-methyltransferase SUV39H1 OS=Homo sapiens GN=SUV39H1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.890e-15
Identity = 48/164 (29.27%), Postives = 80/164 (48.78%), Query Frame = 2
Query:  200 VSLVNDVDDEKGPAHFTYLASLKYAQPVDSLEIFGGCDCRN-------GCVPGDQICPCIQKNAGYLPYTSNGVLVTQKSL-VHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKD-KGWGLRSWDPIRAGAFICEYAGQVIDISKIEELG---GENVDDYLFD 655
            +++ N+VD +  P  F Y+   +  + +   ++  GC+C++       GC PG  +            Y   G +  +  L ++EC   C+C   C NRV Q G+R  L +F+T D +GWG+R+ + IR  +F+ EY G++I   + E  G         YLFD
Sbjct:  145 ITVENEVDLDGPPRAFVYINEYRVGEGITLNQVAVGCECQDCLWAPTGGCCPGASLHK--------FAYNDQGQVRLRAGLPIYECNSRCRCGYDCPNRVVQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQIYDRQGATYLFD 300          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUV91_BOVIN (Histone-lysine N-methyltransferase SUV39H1 OS=Bos taurus GN=SUV39H1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.890e-15
Identity = 48/164 (29.27%), Postives = 80/164 (48.78%), Query Frame = 2
Query:  200 VSLVNDVDDEKGPAHFTYLASLKYAQPVDSLEIFGGCDCRN-------GCVPGDQICPCIQKNAGYLPYTSNGVLVTQKSL-VHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKD-KGWGLRSWDPIRAGAFICEYAGQVIDISKIEELG---GENVDDYLFD 655
            +++ N+VD +  P  F Y+   +  + +   ++  GC+C++       GC PG  +            Y   G +  +  L ++EC   C+C   C NRV Q G+R  L +F+T D +GWG+R+ + IR  +F+ EY G++I   + E  G         YLFD
Sbjct:  145 ITVENEVDLDGPPRAFVYINEYRVGEGITLNQVAVGCECQDCLWAPAGGCCPGASLHK--------FAYNDQGQVRLRAGLPIYECNSRCRCGYDCPNRVVQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQIYDRQGATYLFD 300          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUV91_MOUSE (Histone-lysine N-methyltransferase SUV39H1 OS=Mus musculus GN=Suv39h1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.535e-14
Identity = 47/163 (28.83%), Postives = 78/163 (47.85%), Query Frame = 2
Query:  200 VSLVNDVDDEKGPAHFTYLASLKYAQPVDSLEIFGGCDCRN-------GCVPGDQICPCIQKNAGYLPYTSNGVLVTQKSLVHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKD-KGWGLRSWDPIRAGAFICEYAGQVIDISKIEELG---GENVDDYLFD 655
            +++ N+VD +  P  F Y+   +  + +   ++  GC+C++       GC PG  +      + G        V +     ++EC   C C   C NRV Q G+R  L +F+T D +GWG+R+ + IR  +F+ EY G++I   + E  G         YLFD
Sbjct:  145 ITVENEVDLDGPPRSFVYINEYRVGEGITLNQVAVGCECQDCLLAPTGGCCPGASLHKFAYNDQGQ-------VRLKAGQPIYECNSRCCCGYDCPNRVVQKGIRYDLCIFRTNDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQIYDRQGATYLFD 300          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUV39_DROPS (Histone-lysine N-methyltransferase Su(var)3-9 OS=Drosophila pseudoobscura pseudoobscura GN=Su(var)3-9 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13
Identity = 47/162 (29.01%), Postives = 75/162 (46.30%), Query Frame = 2
Query:  197 PVSLVNDVDDEKGPAHFTYLASLKYAQPVDSLEI-FGGCDCRNG----CVPGDQICPCIQKNAGYLPYTSNGVLVTQKSLVHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKD-KGWGLRSWDPIRAGAFICEYAGQVIDISKIEELG---GENVDDYLFD 655
            P+ + N+ D +   + F Y+      + V   +    GC CR+     C      C  +         T+  + +   S ++EC   C C  +C NRV Q G +  L +FKT +  GWG+R+  P++ G F+CEY G++I   +  E G    +N   YLFD
Sbjct:  371 PIRVENNWDLDTIDSGFKYIQKNIIGEGVPKPQAGLVGCMCRHQSGEQCTASSMCCGRMAGEIFAYDRTTGRLRLRPGSAIYECNSRCSCDESCTNRVVQNGRKHPLVLFKTSNGSGWGVRTPQPLKKGVFVCEYIGEIITCEEANERGKAYDDNGRTYLFD 532          
BLAST of FC877252 vs. ExPASy Swiss-Prot
Match: SUV39_DROME (Histone-lysine N-methyltransferase Su(var)3-9 OS=Drosophila melanogaster GN=Su(var)3-9 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13
Identity = 48/161 (29.81%), Postives = 77/161 (47.83%), Query Frame = 2
Query:  197 PVSLVNDVDDEKGPAHFTYLASLKYAQPVDSLEI-FGGCDCRNGCVPGDQICPCIQKNAGYL---PYTSNGVLVTQKSLVHECGPSCQCPPTCRNRVSQGGLRVHLEVFKTKD-KGWGLRSWDPIRAGAFICEYAGQVIDISKIEELG---GENVDDYLFD 655
            P+ + N++D +   ++F Y+      + V   E    GC C            C  + AG L     ++  + +   S ++EC   C C  +C NR+ Q G +V L +FKT +  GWG+R+   +R G F+CEY G++I   +  E G    +N   YLFD
Sbjct:  374 PIRVENNIDLDTIDSNFMYIHDNIIGKDVPKPEAGIVGCKCTEDTEECTASTKCCARFAGELFAYERSTRRLRLRPGSAIYECNSRCSCDSSCSNRLVQHGRQVPLVLFKTANGSGWGVRAATALRKGEFVCEYIGEIITSDEANERGKAYDDNGRTYLFD 534          
The following BLAST results are available for this feature:
BLAST of FC877252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
SUVR5_ARATH1.813e-1529.94Histone-lysine N-methyltransferase SUVR5 OS=Arabid... [more]
SETB1_DROPS1.813e-1530.48Histone-lysine N-methyltransferase eggless OS=Dros... [more]
SETB1_DROME5.276e-1531.67Histone-lysine N-methyltransferase eggless OS=Dros... [more]
SUVH3_CHLRE6.890e-1531.25Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUV91_PONAB6.890e-1529.27Histone-lysine N-methyltransferase SUV39H1 OS=Pong... [more]
SUV91_HUMAN6.890e-1529.27Histone-lysine N-methyltransferase SUV39H1 OS=Homo... [more]
SUV91_BOVIN6.890e-1529.27Histone-lysine N-methyltransferase SUV39H1 OS=Bos ... [more]
SUV91_MOUSE1.535e-1428.83Histone-lysine N-methyltransferase SUV39H1 OS=Mus ... [more]
SUV39_DROPS2.216e-1329.01Histone-lysine N-methyltransferase Su(var)3-9 OS=D... [more]
SUV39_DROME2.216e-1329.81Histone-lysine N-methyltransferase Su(var)3-9 OS=D... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2BD09RM1 EHR Citrus clementina cDNA clone KN0AAN2BD09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877252 ID=FC877252; Name=FC877252; organism=Citrus clementina; type=EST; length=677bp
TGGTCTTTATAAAATCCAGGAGTCATGGACTGAGAAAGGAAAGTCAGGCT
GCAATGTATTCAAATATAAGTTTATTAGGGTACATGGGCAGCCTGAAGCA
TTTATGACATGGAAACTGATTCAGCAATGGAAGGATGGTATCTCTTTGAG
AGTTGGGGTCATATTACCAGATCTTACTTCCGGGGCAGAAAACATACCTG
TTTCTCTTGTAAATGATGTTGATGATGAGAAAGGGCCTGCACATTTTACA
TATTTGGCTAGTCTCAAGTATGCTCAACCAGTTGATTCACTTGAAATTTT
TGGTGGCTGTGACTGCCGCAATGGATGTGTCCCTGGTGATCAAATTTGTC
CATGCATTCAAAAAAATGCTGGCTATCTTCCGTATACTTCAAATGGTGTT
CTTGTGACTCAAAAATCCTTAGTGCATGAGTGTGGTCCTTCTTGTCAGTG
TCCTCCTACCTGCCGGAACCGAGTGTCTCAAGGTGGCCTGAGAGTACATT
TGGAGGTGTTTAAAACTAAGGATAAAGGCTGGGGTCTTAGGTCTTGGGAT
CCCATCCGTGCTGGGGCTTTCATATGTGAATATGCAGGGCAGGTTATTGA
CATTTCGAAGATAGAGGAACTTGGAGGTGAAAATGTAGATGATTATCTTT
TTGATGCTACCCGTACATATCANCCTG
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