FC877257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877257 vs. ExPASy Swiss-Prot
Match: SC61A_YARLI (Protein transport protein SEC61 subunit alpha OS=Yarrowia lipolytica GN=SEC61 PE=3 SV=2) HSP 1 Score: 282.337 bits (721), Expect = 2.167e-75 Identity = 137/254 (53.94%), Postives = 182/254 (71.65%), Query Frame = 1 Query: 10 FEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 771 FEGA++A HLL T+++K A+ EAF RQ+LPN++ L+ TV +F V+Y QGF+V +PV+S RG G +PIKLFYTSN+PI+LQSAL SN++ ISQ+L++K+ N V LLG W E PV G+AYY+ P + + A+P + Y+ F+L CA+FS TWIE+SGSS RDVAKQ KEQ +V+ G R+++ KEL R IPTAAAFGG IGAL+V +D +GA+ SGTGIL+AVT IY Y+E KE Sbjct: 211 FEGAIVAFVHLLFTRKDKKRAIIEAFTRQDLPNMSQLVTTVAIFAAVIYLQGFRVDIPVKSSKQRGPYGVFPIKLFYTSNLPIMLQSALTSNIFIISQMLFKKFPTNVLVRLLGVWDGREGMQQLFPVSGIAYYMQPPFNAKEALADPVKTVIYIAFVLGVCAVFSATWIEISGSSPRDVAKQFKEQGLVIAGRRETSAYKELKRIIPTAAAFGGATIGALSVASDLLGALSSGTGILMAVTTIYGYYEMAAKE 464
BLAST of FC877257 vs. ExPASy Swiss-Prot
Match: SC61A_ASHGO (Protein transport protein SEC61 subunit alpha OS=Ashbya gossypii GN=SEC61 PE=3 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 1.835e-74 Identity = 140/257 (54.47%), Postives = 187/257 (72.76%), Query Frame = 1 Query: 10 FEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKW---KESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 771 FEGAV+ALFHLL +++K AL EAFYR LPN+ +L+TV VFL V+Y QGF+ LPVRS RGQ G+YPIKLFYTSN PI+LQSAL SN++ SQLLY+K+ N V +LG W ++ YS ++ + GL+YY+ P S + +P + Y+ F+L ACA+FS+TWI+VSG+S RDV+KQ KEQ +V+ G R++++ +EL + IPTAAAFGG IGAL+V +D +G +GSGT IL+A T IY Y+ET KE Sbjct: 210 FEGAVVALFHLLSVRKDKKRALVEAFYRDYLPNMFQVLSTVFVFLFVLYLQGFRYELPVRSTRTRGQVGSYPIKLFYTSNTPIMLQSALTSNIFLTSQLLYQKFPNNPIVKMLGVWGTRSDAPYSPNA-AISGLSYYIQPPFSFTEALLDPIKTVVYVTFVLGACAMFSRTWIDVSGTSPRDVSKQFKEQGLVINGRRETSVYRELKKVIPTAAAFGGATIGALSVGSDLLGTLGSGTSILMATTTIYGYYETAAKE 465
BLAST of FC877257 vs. ExPASy Swiss-Prot
Match: SC61A_CANGA (Protein transport protein SEC61 subunit alpha OS=Candida glabrata GN=SEC61 PE=3 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 2.396e-74 Identity = 141/255 (55.29%), Postives = 181/255 (70.98%), Query Frame = 1 Query: 10 FEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWK-ESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 771 FEGAVIA FHLL +++K AL EAFYR+NLPN+ ++ATV VFL V+Y QGF+ LPV+S RGQ YPIKLFYTSN PI+LQSAL SN++ ISQ+L++KY N + L G W +G +P+ G++YY+ SL +P + Y F+L CALFSKTWIE+SG+SA+DVAKQ KEQ MV+ G R++++ KEL + IPTAAAFGG IGAL+V +D +GA+GSG ILLA T IY Y+E KE Sbjct: 210 FEGAVIAFFHLLAVRKDKKRALVEAFYRENLPNMFQVIATVFVFLFVLYLQGFRYELPVKSTKVRGQMAIYPIKLFYTSNTPIMLQSALSSNIFLISQILFQKYPSNPVIRLFGVWGIRPGTNGPQVPLSGISYYLQPIGSLKMALLDPIKTVIYTAFVLGTCALFSKTWIEISGTSAKDVAKQFKEQGMVINGKRETSVYKELKKIIPTAAAFGGATIGALSVGSDLLGALGSGASILLATTTIYGYYEVAAKE 464
BLAST of FC877257 vs. ExPASy Swiss-Prot
Match: SC61A_YEAST (Protein transport protein SEC61 OS=Saccharomyces cerevisiae GN=SEC61 PE=1 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 4.519e-73 Identity = 136/255 (53.33%), Postives = 181/255 (70.98%), Query Frame = 1 Query: 10 FEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWK-ESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 771 FEGAVIA FHLL +++K AL EAFYR NLPN+ +L TV +FL V+Y QGF+ LP+RS RGQ G YPIKLFYTSN PI+LQSAL SN++ ISQ+L++KY N + L+G W G + + GLAYY+ SL++ +P + Y+ F+L +CA+FSKTWIE+SG+S RD+AKQ K+Q MV+ G R++++ +EL + IPTAAAFGG IGAL+V +D +G +GSG IL+A T IY Y+E KE Sbjct: 211 FEGAVIAFFHLLAVRKDKKRALVEAFYRTNLPNMFQVLMTVAIFLFVLYLQGFRYELPIRSTKVRGQIGIYPIKLFYTSNTPIMLQSALTSNIFLISQILFQKYPTNPLIRLIGVWGIRPGTQGPQMALSGLAYYIQPLMSLSEALLDPIKTIVYITFVLGSCAVFSKTWIEISGTSPRDIAKQFKDQGMVINGKRETSIYRELKKIIPTAAAFGGATIGALSVGSDLLGTLGSGASILMATTTIYGYYEAAAKE 465
BLAST of FC877257 vs. ExPASy Swiss-Prot
Match: SC61A_SCHPO (Protein transport protein sec61 subunit alpha OS=Schizosaccharomyces pombe GN=sec61 PE=2 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 2.480e-71 Identity = 134/261 (51.34%), Postives = 177/261 (67.82%), Query Frame = 1 Query: 10 FEGAVIALFHLLITKQNKVGALREAFYRQNL-------PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 771 FEGAVI +++ T NK AL +AF+R L PN+ N AT+LVF +V+Y Q F+V +P+RS+ RG + +P+KL YTSN PI+LQSAL SNL+F S+LL+ ++S NF V LG W+++ SG L+YY++ PAS D +P H L Y+ F + ACALFSK WIEVSG+S RDVAKQLK QQ+VM GHR+ ++ KEL R IPTAA G +GAL V +D +GA+GSGT +LL T IY Y+E +KE Sbjct: 211 FEGAVINFVYVMFTWDNKAAALYQAFFRSGLTSSQIQLPNLWNFFATLLVFGVVIYLQDFRVEIPIRSQKFRGYRSTFPVKLLYTSNTPIMLQSALTSNLFFASRLLFNRFSSNFLVRFLGVWEQTATSG-------LSYYLSPPASFQDALIDPIHTLVYVFFTMFACALFSKLWIEVSGASPRDVAKQLKSQQLVMAGHREGSMYKELKRIIPTAAWLSGAVVGALAVASDLLGALGSGTAVLLCTTTIYGYYEQLQKE 464
BLAST of FC877257 vs. ExPASy Swiss-Prot
Match: SECY_METVA (Preprotein translocase subunit secY OS=Methanococcus vannielii GN=secY PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 9.511e-39 Identity = 93/264 (35.23%), Postives = 144/264 (54.55%), Query Frame = 1 Query: 1 ARGFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 786 A G EG + F + VG+L AF I +L+T+ VFL+VVY + +V +P+ +G G YPIK Y SN+P+IL +AL +N+ F++ +G +YS + V G+AYY + P ++++ ++P HA+FY + M+ C LF W+E SG A+ +AK+L M + G R S ++++ L RYI G +G L ADF GA+G GTG+LL V+I+Y+ +E +E+ SEL Sbjct: 185 AFGAEGYLWKFFSAM-----SVGSLGIAF-----EYILPILSTLFVFLVVVYVESIRVEIPLAHGRVKGAVGKYPIKFIYVSNLPVILAAALFANIQL----------WGMFLDRMGYPILGQYS-NGTAVSGIAYYFSTPYGISNIISDPLHAIFYTLMMVIFCILFGLFWVETSGLDAKSMAKKLGNLDMAIKGFRKSQKSIEQRLKRYIKPITVMGSAFVGFLAAAADFTGALGGGTGVLLTVSIVYRLYEQLVQEQLSEL 427
BLAST of FC877257 vs. ExPASy Swiss-Prot
Match: SECY_PYRAB (Preprotein translocase subunit secY OS=Pyrococcus abyssi GN=secY PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.720e-38 Identity = 88/243 (36.21%), Postives = 141/243 (58.02%), Query Frame = 1 Query: 67 GALREAFYRQNL-PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 786 G L+ A YR P++ ++AT++VFL+VVYF+ +V +P+ + +G YPI+ Y SN+PIIL AL +N+ +++L R L W + PVGG YV P S+ + NP AL YL+ + + +F W+E++G AR +A+QL+ + +PG R L++ L +YIP +G + + + VLADF+GA+G+GTGILL V I+Y+++E +E+ SE+ Sbjct: 226 GDLKGALYRGGTAPDMMAVIATIIVFLVVVYFESMRVEIPLGYRGVT-IRGRYPIRFLYVSNIPIILTFALYANIQLWARVLDR---------LGHPWLGTFDPTTGNPVGGFVLYVIPPRSIFTVIDNPVRALVYLILTVISSLIFGFLWVELTGLDARTIARQLQRAGLQIPGFRRDPRTLERVLQKYIPYVTFWGSLTVALIAVLADFLGALGTGTGILLTVGILYRFYEEIAREQISEM 458
BLAST of FC877257 vs. ExPASy Swiss-Prot
Match: SECY_METJA (Preprotein translocase subunit secY OS=Methanocaldococcus jannaschii GN=secY PE=1 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 1.052e-37 Identity = 79/232 (34.05%), Postives = 132/232 (56.90%), Query Frame = 1 Query: 97 NLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 786 N+ I ++ T++VFL+VVY + +V +P+ +G G YPIK Y SN+P+IL +AL +N+ LYR + +LG ++ V G+AYY++ P L+ + ++P HA+ Y++ M+ C +F W+E +G + +AK++ M + G R S ++ L RYIP +G L +A+F+GA+G GTG+LL V+I+Y+ +E +E+ SEL Sbjct: 206 NIEYIAPIIGTIIVFLMVVYAECMRVEIPLAHGRIKGAVGKYPIKFVYVSNIPVILAAALFANIQLWGLALYR-----MGIPILGHYEGGR------AVDGIAYYLSTPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIGSLGMAIKGFRKSEKAIEHRLKRYIPPLTVMSSAFVGFLATIANFIGALGGGTGVLLTVSIVYRMYEQLLREKVSEL 426
BLAST of FC877257 vs. ExPASy Swiss-Prot
Match: SECY_PYRHO (Preprotein translocase subunit secY OS=Pyrococcus horikoshii GN=secY PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.373e-37 Identity = 88/243 (36.21%), Postives = 146/243 (60.08%), Query Frame = 1 Query: 67 GALREAFYRQ-NLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 786 G L+ A YR + P++ + AT++VFL+VVYF+ +V +P+ + +G YPIK Y SN+PIIL AL +N+ +++L R F LG++ +G+ P+GG YV P ++ + NP A+ YL+ + LF W+E++G AR +A+QL+ + +PG R L++ L +YIP +G + + ++VLADF+GA+G+GTGILL V I+Y+++E +E+ +E+ Sbjct: 226 GDLKGALYRGGSAPDMIAVTATIIVFLVVVYFESMRVEIPLGYRGVT-IRGRYPIKFLYVSNIPIILTFALYANIQLWARVLDR-----FGHPWLGRF--DPVTGN--PIGGFVLYVIPPRNIFTVIDNPVRAIIYLILTIIFSLLFGFLWVELTGLDARTIARQLQRAGLQIPGFRRDPRTLERVLQKYIPYVTFWGSLTVALISVLADFLGALGTGTGILLTVGILYRFYEEIAREQITEM 458
BLAST of FC877257 vs. ExPASy Swiss-Prot
Match: SECY_PYRFU (Preprotein translocase subunit secY OS=Pyrococcus furiosus GN=secY PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.219e-37 Identity = 88/243 (36.21%), Postives = 146/243 (60.08%), Query Frame = 1 Query: 67 GALREAFYRQ-NLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 786 G L A YR + P++ +++AT++VF IVVYF+ +V +P+ + +G+YPI+ Y SN+PIIL AL +N+ +++L R G+ + LG++ + S P+ G YV P ++ + NP A+ YL+ + LF W+E++G AR +A+QL+ + +PG R L+K L RYIP +G + + + VLADF+GA+G+GTGILL V I+Y+++E +E+ +E+ Sbjct: 226 GDLWGAIYRGGSAPDMLSVVATIVVFFIVVYFESMRVEIPLGYRGVT-VRGSYPIRFLYVSNIPIILTFALYANIQLWARVLDRL--GHPW---LGRFDPTTGS----PISGFVLYVIPPRNIFSVIDNPVRAIVYLILTVIFSLLFGYLWVELTGLDARSIARQLQRAGLQIPGFRRDPRTLEKVLQRYIPYVTFWGSLTVALIAVLADFLGALGTGTGILLTVGILYRFYEEIAREQITEM 458 The following BLAST results are available for this feature:
BLAST of FC877257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877257 ID=FC877257; Name=FC877257; organism=Citrus clementina; type=EST; length=818bpback to top |