FC877263

Overview
NameFC877263
Unique NameFC877263
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length655
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877263 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.403e-33
Identity = 69/146 (47.26%), Postives = 95/146 (65.07%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCED-AQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPE-GLCGIATKPSYPV 445
            F++I+KN G+ TE DYPY+   G C    +      I  +EDV   DE AL +A++ QPVS+ IE  G  FQ Y+ GIF   CGT   HAV  VG+G +E+G+ YW+++NSWG +WGE GY+R+ R++ A + G CGIA + SYPV
Sbjct:  217 FQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGSCGTNLDHAVVAVGYG-SENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASYPV 361          
BLAST of FC877263 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33
Identity = 61/145 (42.07%), Postives = 92/145 (63.45%), Query Frame = 2
Query:    8 RGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            R + +II N G+ T+ +YPY+  QGTC       +A I+ +  V+ NDE  ++ AV+ QP++  I+ SG +FQ YKGG+++  CG   +HA+ I+G+G       YW+++NSWG  WG+ GY+RI RDV    G+CGIA  P +P
Sbjct:   70 RAYDFIISNNGVTTDENYPYRAYQGTCNANYFPNSAYITGYSYVRRNDESHMMYAVSNQPIAALIDASGDNFQYYKGGVYSGPCGFSLNHAITIIGYGRD----SYWIVRNSWGSSWGQGGYVRIRRDVSHSGGVCGIAMSPLFP 210          
BLAST of FC877263 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.126e-33
Identity = 62/144 (43.06%), Postives = 94/144 (65.28%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F++I+ N GI +E  YPY+   G C          I ++E+V  ++EQ+L +AVA QPVS+ ++ +G DFQ Y+ GIF   C    +HA+ +VG+G TE+   +W++KNSWG+ WGE+GY+R  R+++ P+G CGI    SYPV
Sbjct:   74 FQFIVNNGGINSEETYPYRGQDGICNSTVNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISANHALTVVGYG-TENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPV 216          
BLAST of FC877263 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33
Identity = 65/146 (44.52%), Postives = 90/146 (61.64%), Query Frame = 2
Query:    8 RGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            R F+YII N GI +E  YPY    GTC+  +      I ++ +V  NDE++L +AVA QPVS+ ++ +G DFQ Y+ GIF   C    +H    VG   TE+   YW +KNSWG+ WGE+GY+R+ R++    G CGIA  PSYP+
Sbjct:   72 RAFQYIINNGGINSEEHYPYTGTNGTCDTKENAHVVSIDSYRNVPSNDEKSLQKAVANQPVSVTMDAAGRDFQLYRNGIFTGSCNISANH-YRTVGGRETENDKDYWTVKNSWGKNWGESGYIRVERNIAESSGKCGIAISPSYPI 216          
BLAST of FC877263 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.551e-32
Identity = 68/146 (46.58%), Postives = 87/146 (59.59%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQ-VKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGA-TEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F +I +N G+ TE DYPY  + G C  A+  +    I  FEDV  NDE +L +AVA QPVS+ I+  G +FQ Y  G+F   CGT   H V  VG+G     G  YW ++NSWG  WGE GY+R+ R+V A  G CGIA   SYP+
Sbjct:  229 FAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGRCGTNLDHGVVAVGYGTDAATGAAYWTVRNSWGPDWGENGYIRMERNVTARTGKCGIAMMASYPI 374          
BLAST of FC877263 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.514e-32
Identity = 68/147 (46.26%), Postives = 94/147 (63.95%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQ-GTC---EDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F++I+KN GI T+ DYPY     G C   ++   +V   I  +EDV  +DE++L +AVA QPVS+ IE S   FQ YK G+    CG    H V +VG+G+T  G  YW+I+NSWG  WG++GY+++ R++D P G CGIA  PSYP
Sbjct:  203 FEFIMKNGGIETDQDYPYNANDLGLCNADKNNNTRVVT-IDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVMTGTCGISLDHGVVVVGYGST-SGEDYWIIRNSWGLNWGDSGYVKLQRNIDDPFGKCGIAMMPSYP 347          
BLAST of FC877263 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.991e-31
Identity = 63/145 (43.45%), Postives = 95/145 (65.52%), Query Frame = 2
Query:    8 RGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            R F++II N+G+A+ A YPYK  +GTC+   V  +A I+ +  V  N+E +++ AV+ QP+++ ++ +  +FQ YK G+FN  CGT  +HAV  +G+G  +D + Y      WG KWGEAGY+R+ RDV +  G+CGIA  P YP
Sbjct:   70 RAFEFIISNKGVASGAIYPYKAAKGTCKTDGVPNSAYITGYARVPRNNESSMMYAVSKQPITVAVDANA-NFQYYKSGVFNGPCGTSLNHAVTAIGYG--QDSIIY---PKKWGAKWGEAGYIRMARDVSSSSGICGIAIDPLYP 208          
BLAST of FC877263 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.452e-30
Identity = 69/143 (48.25%), Postives = 90/143 (62.94%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            ++YII N GI T+A+YPYK VQG C+ A   V+  I  +  V   +E AL QAVA+QP ++ I+ S   FQ Y  GIF+  CGT+ +H V IVG+ A      YW+++NSWG  WGE GY+R+LR      GLCGIA  P YP
Sbjct:   72 YQYIINNGGIDTQANYPYKAVQGPCQAASKVVS--IDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLNHGVTIVGYQA-----NYWIVRNSWGRYWGEKGYIRMLRVGGC--GLCGIARLPYYP 205          
BLAST of FC877263 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.738e-29
Identity = 70/143 (48.95%), Postives = 84/143 (58.74%), Query Frame = 2
Query:   17 KYIIKNQGIATEADYPYKEVQGTCEDAQVK-VAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            +Y+ KN GI   + YPYK  QGTC   QV     K S    V+PN+E  LL A+A QPVS+ +E  G  FQ YKGGIF   CGT+  HAV  VG+G +  G  Y LIKNSWG  WGE GY+RI R      G+CG+     YP
Sbjct:  205 EYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDHAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYP 345          
BLAST of FC877263 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.028e-28
Identity = 65/145 (44.83%), Postives = 89/145 (61.38%), Query Frame = 2
Query:   17 KYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAK--ISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            +Y++ N G+ TE +YPY++ QG C  A+ K   K  I+ ++ V  NDE +L+QA+A QPVS+  +  G  FQ YKGGI+   CGT   HAV  VG+G T     Y L+KNSWG  WGE GY+RI R     +G CG+ T   +P+
Sbjct:   73 QYVVDN-GVHTEREYPYEKKQGRCR-AKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTDHAVTAVGYGKT-----YLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPI 210          
The following BLAST results are available for this feature:
BLAST of FC877263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
GCP1_ARATH1.403e-3347.26Germination-specific cysteine protease 1 OS=Arabid... [more]
MDO1_PSEMR1.833e-3342.07Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
CPGP2_ZINOF3.126e-3343.06Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CPGP1_ZINOF4.083e-3344.52Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
CYSP1_ORYSJ1.551e-3246.58Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CPR1_ARATH4.514e-3246.26Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
BROM2_ANACO4.991e-3143.45Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
ERVC_TABDI1.452e-3048.25Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
PAPA3_CARPA2.738e-2948.95Caricain OS=Carica papaya PE=1 SV=2[more]
MEX1_JACME3.028e-2844.83Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2BE11RM1 EHR Citrus clementina cDNA clone KN0AAN2BE11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877263 ID=FC877263; Name=FC877263; organism=Citrus clementina; type=EST; length=655bp
TTCGGCACGAGGCTTTAAATATATTATAAAAAACCAGGGTATTGCCACAG
AAGCGGATTATCCATACAAGGAAGTCCAAGGAACTTGTGAAGACGCACAG
GTCAAGGTAGCTGCTAAAATTAGTAACTTTGAAGATGTAAAACCCAATGA
TGAGCAGGCTTTACTCCAAGCTGTAGCCATGCAGCCAGTATCAATTTGCA
TTGAAGGAAGTGGACCAGACTTCCAGAGCTACAAAGGCGGTATTTTTAAC
CGAGGATGTGGAACTCAGTGTTCTCATGCTGTTGCTATCGTTGGATTTGG
GGCAACTGAAGATGGAATGAAGTATTGGTTAATTAAGAATTCATGGGGGG
AGAAATGGGGTGAGGCCGGCTACATGAGGATTCTCAGAGATGTTGATGCA
CCTGAAGGTCTTTGTGGCATTGCCACTAAACCTTCCTACCCAGTTGCATG
AGTAGCAGTATTTTATATTATATTATTATTAGCCGCCTCTTAATAATGAT
GTCTTCAAGCCTACACATGCATTAGCCTCGAAAGGCTTATACGAACCGTA
TGAATCGTATGATTCTTTGGTTTTATCTATGTTGAGTATTTCATAAGTTG
TAATTGAACGCCAATATTTGGTATTAGTTAATGTTAAATCTCTCATTTAA
GTAAA
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